RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 PDE3BQ13370 1112 aa21.27■■□□□ 1
SNAP47-213ENST00000617596 MCM10Q7L590 875 aa21.27■■□□□ 1
SNAP47-213ENST00000617596 CARD10Q9BWT7 1032 aa21.27■■□□□ 1
SNAP47-213ENST00000617596 GAS2L2Q8NHY3 880 aa21.27■■□□□ 1
SNAP47-213ENST00000617596 PLCH1Q4KWH8 1693 aa21.26■□□□□ 0.99
SNAP47-213ENST00000617596 SLFN5Q08AF3 891 aa21.25■□□□□ 0.99
SNAP47-213ENST00000617596 CRB1P82279 1406 aa21.25■□□□□ 0.99
SNAP47-213ENST00000617596 TATP17735 454 aaPredicted RBP21.25■□□□□ 0.99
SNAP47-213ENST00000617596 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
SNAP47-213ENST00000617596 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
SNAP47-213ENST00000617596 PLEKHO1Q53GL0 409 aaPredicted RBP21.24■□□□□ 0.99
SNAP47-213ENST00000617596 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
SNAP47-213ENST00000617596 DLG5Q8TDM6 1919 aa21.24■□□□□ 0.99
SNAP47-213ENST00000617596 SLIT2O94813 1529 aa21.24■□□□□ 0.99
SNAP47-213ENST00000617596 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
SNAP47-213ENST00000617596 DUSP27Q5VZP5 1158 aa21.23■□□□□ 0.99
SNAP47-213ENST00000617596 GNAT3A8MTJ3 354 aa21.22■□□□□ 0.99
SNAP47-213ENST00000617596 AMOTQ4VCS5 1084 aa21.22■□□□□ 0.99
SNAP47-213ENST00000617596 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
SNAP47-213ENST00000617596 E9PSI1 815 aa21.21■□□□□ 0.99
SNAP47-213ENST00000617596 LMOD3Q0VAK6 560 aa21.21■□□□□ 0.99
SNAP47-213ENST00000617596 CCDC9Q9Y3X0 531 aaKnown RBP21.21■□□□□ 0.99
SNAP47-213ENST00000617596 RTF1Q92541 710 aaKnown RBP21.21■□□□□ 0.99
SNAP47-213ENST00000617596 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
SNAP47-213ENST00000617596 IL2RBP14784 551 aa21.2■□□□□ 0.98
SNAP47-213ENST00000617596 TRMT2AQ8IZ69 625 aaKnown RBP21.2■□□□□ 0.98
SNAP47-213ENST00000617596 MAP3K5Q99683 1374 aa21.2■□□□□ 0.98
SNAP47-213ENST00000617596 UNC5CLQ8IV45 518 aa21.19■□□□□ 0.98
SNAP47-213ENST00000617596 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
SNAP47-213ENST00000617596 BCL9LQ86UU0 1499 aa21.19■□□□□ 0.98
SNAP47-213ENST00000617596 MPRIPQ6WCQ1 1025 aa21.19■□□□□ 0.98
SNAP47-213ENST00000617596 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
SNAP47-213ENST00000617596 FNBP4Q8N3X1 1017 aaPredicted RBP21.18■□□□□ 0.98
SNAP47-213ENST00000617596 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
SNAP47-213ENST00000617596 C1orf141Q5JVX7 400 aa21.17■□□□□ 0.98
SNAP47-213ENST00000617596 USP21Q9UK80 565 aa21.17■□□□□ 0.98
SNAP47-213ENST00000617596 SPG7Q9UQ90 795 aa21.17■□□□□ 0.98
SNAP47-213ENST00000617596 OVOS2A0A0G2JMS6 1433 aa21.17■□□□□ 0.98
SNAP47-213ENST00000617596 SPATA31A1Q5TZJ5 1347 aa21.17■□□□□ 0.98
SNAP47-213ENST00000617596 AKAP4Q5JQC9 854 aa21.17■□□□□ 0.98
SNAP47-213ENST00000617596 CYP27B1O15528 508 aa21.16■□□□□ 0.98
SNAP47-213ENST00000617596 MIS18AQ9NYP9 233 aa21.16■□□□□ 0.98
SNAP47-213ENST00000617596 FANCIQ9NVI1 1328 aa21.16■□□□□ 0.98
SNAP47-213ENST00000617596 ZCRB1Q8TBF4 217 aaKnown RBP21.16■□□□□ 0.98
SNAP47-213ENST00000617596 SPATA31A5Q5VU36 1347 aa21.15■□□□□ 0.98
SNAP47-213ENST00000617596 SPATA31A7Q8IWB4 1347 aa21.15■□□□□ 0.98
SNAP47-213ENST00000617596 AFF2P51816 1311 aa21.15■□□□□ 0.98
SNAP47-213ENST00000617596 IL16Q14005 1332 aa21.15■□□□□ 0.98
SNAP47-213ENST00000617596 NWD2Q9ULI1 1742 aa21.14■□□□□ 0.98
SNAP47-213ENST00000617596 HTATSF1O43719 755 aaKnown RBP21.14■□□□□ 0.98
SNAP47-213ENST00000617596 PHKG2P15735 406 aa21.14■□□□□ 0.98
SNAP47-213ENST00000617596 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.98
SNAP47-213ENST00000617596 MYH16Q9H6N6 1097 aa21.14■□□□□ 0.98
SNAP47-213ENST00000617596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.14■□□□□ 0.98
SNAP47-213ENST00000617596 CALD1Q05682 793 aaKnown RBP21.13■□□□□ 0.97
SNAP47-213ENST00000617596 MBIPQ9NS73 344 aa21.13■□□□□ 0.97
SNAP47-213ENST00000617596 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 CFAP44Q96MT7 982 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 IFT57Q9NWB7 429 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 ZNF853P0CG23 659 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 GNAI1P63096 354 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 VPS72Q15906 364 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
SNAP47-213ENST00000617596 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
SNAP47-213ENST00000617596 PARP4Q9UKK3 1724 aaKnown RBP21.1■□□□□ 0.97
SNAP47-213ENST00000617596 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
SNAP47-213ENST00000617596 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
SNAP47-213ENST00000617596 CEMIPQ8WUJ3 1361 aa21.1■□□□□ 0.97
SNAP47-213ENST00000617596 PCDH11XQ9BZA7 1347 aa21.1■□□□□ 0.97
SNAP47-213ENST00000617596 PCDH11YQ9BZA8 1340 aa21.1■□□□□ 0.97
SNAP47-213ENST00000617596 PKD1L3Q7Z443 1732 aa21.09■□□□□ 0.97
SNAP47-213ENST00000617596 RBM19Q9Y4C8 960 aaKnown RBP21.09■□□□□ 0.97
SNAP47-213ENST00000617596 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
SNAP47-213ENST00000617596 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
SNAP47-213ENST00000617596 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
SNAP47-213ENST00000617596 CHL1O00533 1208 aa21.08■□□□□ 0.96
SNAP47-213ENST00000617596 ELL2O00472 640 aaPredicted RBP21.07■□□□□ 0.96
SNAP47-213ENST00000617596 PLEKHG2Q9H7P9 1386 aa21.07■□□□□ 0.96
SNAP47-213ENST00000617596 EXOC5O00471 708 aa21.06■□□□□ 0.96
SNAP47-213ENST00000617596 TEFQ10587 303 aa21.06■□□□□ 0.96
SNAP47-213ENST00000617596 KRT24Q2M2I5 525 aa21.06■□□□□ 0.96
SNAP47-213ENST00000617596 TSPYL4Q9UJ04 414 aa21.06■□□□□ 0.96
SNAP47-213ENST00000617596 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
SNAP47-213ENST00000617596 BARGINQ6ZT62 677 aa21.05■□□□□ 0.96
SNAP47-213ENST00000617596 TSPYL6Q8N831 410 aa21.05■□□□□ 0.96
SNAP47-213ENST00000617596 LRRC37A3O60309 1634 aa21.05■□□□□ 0.96
SNAP47-213ENST00000617596 A0A0G2JS52 829 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 NEFLP07196 543 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 DDB1Q16531 1140 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 DCAF5Q96JK2 942 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 NFATC2IPQ8NCF5 419 aa21.04■□□□□ 0.96
SNAP47-213ENST00000617596 GJD4Q96KN9 370 aaPredicted RBP21.03■□□□□ 0.96
SNAP47-213ENST00000617596 KCNQ3O43525 872 aa21.02■□□□□ 0.96
SNAP47-213ENST00000617596 CDCA7Q9BWT1 371 aaPredicted RBP21.02■□□□□ 0.96
SNAP47-213ENST00000617596 QTRT2Q9H974 415 aaKnown RBP21.02■□□□□ 0.96
SNAP47-213ENST00000617596 BTBD11A6QL63 1104 aa21.02■□□□□ 0.95
SNAP47-213ENST00000617596 HSP90AB1P08238 724 aaKnown RBP21.02■□□□□ 0.95
SNAP47-213ENST00000617596 SLC52A2Q9HAB3 445 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms