RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 TATP17735 454 aaPredicted RBP31.54■■■□□ 2.64
ACACA-239ENST00000617548 NBPF14Q5TI25 921 aa31.53■■■□□ 2.64
ACACA-239ENST00000617548 NUP188Q5SRE5 1749 aa31.52■■■□□ 2.64
ACACA-239ENST00000617548 NHSQ6T4R5 1651 aa31.51■■■□□ 2.64
ACACA-239ENST00000617548 RGPD3A6NKT7 1758 aaPredicted RBP31.51■■■□□ 2.64
ACACA-239ENST00000617548 RGPD4Q7Z3J3 1758 aa31.51■■■□□ 2.64
ACACA-239ENST00000617548 KAT6BQ8WYB5 2073 aa31.5■■■□□ 2.63
ACACA-239ENST00000617548 AMER1Q5JTC6 1135 aaPredicted RBP31.47■■■□□ 2.63
ACACA-239ENST00000617548 SRCAPQ6ZRS2 3230 aa31.47■■■□□ 2.63
ACACA-239ENST00000617548 SHANK3Q9BYB0 1731 aa31.46■■■□□ 2.63
ACACA-239ENST00000617548 EIF4A2Q14240 407 aaKnown RBP31.45■■■□□ 2.63
ACACA-239ENST00000617548 EYA1Q99502 592 aa31.45■■■□□ 2.63
ACACA-239ENST00000617548 SYTL4Q96C24 671 aaPredicted RBP31.44■■■□□ 2.62
ACACA-239ENST00000617548 TXNRD1Q16881 649 aa31.42■■■□□ 2.62
ACACA-239ENST00000617548 PROM2Q8N271 834 aa31.42■■■□□ 2.62
ACACA-239ENST00000617548 BTAF1O14981 1849 aa31.42■■■□□ 2.62
ACACA-239ENST00000617548 PER1O15534 1290 aaPredicted RBP31.41■■■□□ 2.62
ACACA-239ENST00000617548 PCDH11XQ9BZA7 1347 aa31.41■■■□□ 2.62
ACACA-239ENST00000617548 PCDH11YQ9BZA8 1340 aa31.41■■■□□ 2.62
ACACA-239ENST00000617548 PRIM1P49642 420 aaKnown RBP31.4■■■□□ 2.62
ACACA-239ENST00000617548 CC2D1BQ5T0F9 858 aaKnown RBP31.4■■■□□ 2.62
ACACA-239ENST00000617548 NCAPD2Q15021 1401 aa31.4■■■□□ 2.62
ACACA-239ENST00000617548 DOT1LQ8TEK3 1739 aa31.39■■■□□ 2.62
ACACA-239ENST00000617548 SPG7Q9UQ90 795 aa31.37■■■□□ 2.61
ACACA-239ENST00000617548 CNGB1Q14028 1251 aaPredicted RBP31.36■■■□□ 2.61
ACACA-239ENST00000617548 PKD1L3Q7Z443 1732 aa31.33■■■□□ 2.61
ACACA-239ENST00000617548 CYP27B1O15528 508 aa31.33■■■□□ 2.61
ACACA-239ENST00000617548 ANO8Q9HCE9 1232 aaPredicted RBP31.33■■■□□ 2.61
ACACA-239ENST00000617548 IGSF1Q8N6C5 1336 aa31.32■■■□□ 2.6
ACACA-239ENST00000617548 LRP5O75197 1615 aa31.31■■■□□ 2.6
ACACA-239ENST00000617548 STK32BQ9NY57 414 aa31.31■■■□□ 2.6
ACACA-239ENST00000617548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.3■■■□□ 2.63e-9■■■■□ 26.7
ACACA-239ENST00000617548 MTHFSP49914 203 aa31.29■■■□□ 2.6
ACACA-239ENST00000617548 NPC1L1Q9UHC9 1359 aa31.28■■■□□ 2.6
ACACA-239ENST00000617548 SLC15A2Q16348 729 aa31.25■■■□□ 2.59
ACACA-239ENST00000617548 SLC27A3Q5K4L6 730 aa31.24■■■□□ 2.59
ACACA-239ENST00000617548 MPRIPQ6WCQ1 1025 aa31.24■■■□□ 2.59
ACACA-239ENST00000617548 IL13P35225 146 aa31.23■■■□□ 2.59
ACACA-239ENST00000617548 IFNL2Q8IZJ0 200 aa31.23■■■□□ 2.59
ACACA-239ENST00000617548 LRRC4BQ9NT99 713 aa31.23■■■□□ 2.59
ACACA-239ENST00000617548 NKX1-1Q15270 411 aaPredicted RBP31.22■■■□□ 2.59
ACACA-239ENST00000617548 PLEKHG2Q9H7P9 1386 aa31.21■■■□□ 2.59
ACACA-239ENST00000617548 PLEKHO1Q53GL0 409 aaPredicted RBP31.21■■■□□ 2.59
ACACA-239ENST00000617548 SULT6B1Q6IMI4 303 aa31.21■■■□□ 2.59
ACACA-239ENST00000617548 AEBP1Q8IUX7 1158 aa31.21■■■□□ 2.59
ACACA-239ENST00000617548 PHKG2P15735 406 aa31.2■■■□□ 2.59
ACACA-239ENST00000617548 TOGARAM1Q9Y4F4 1720 aa31.18■■■□□ 2.58
ACACA-239ENST00000617548 KCNQ4P56696 695 aa31.18■■■□□ 2.58
ACACA-239ENST00000617548 SPON1Q9HCB6 807 aa31.18■■■□□ 2.58
ACACA-239ENST00000617548 PAPPAQ13219 1627 aa31.17■■■□□ 2.58
ACACA-239ENST00000617548 AMOTQ4VCS5 1084 aa31.17■■■□□ 2.58
ACACA-239ENST00000617548 CCNL1Q9UK58 526 aaPredicted RBP31.17■■■□□ 2.58
ACACA-239ENST00000617548 LY75O60449 1722 aa31.17■■■□□ 2.58
ACACA-239ENST00000617548 ITGB4P16144 1822 aa31.17■■■□□ 2.58
ACACA-239ENST00000617548 DIAPH1O60610 1272 aaKnown RBP31.16■■■□□ 2.58
ACACA-239ENST00000617548 PDGFDQ9GZP0 370 aaPredicted RBP31.16■■■□□ 2.58
ACACA-239ENST00000617548 CASZ1Q86V15 1759 aa31.15■■■□□ 2.58
ACACA-239ENST00000617548 ZNF827Q17R98 1081 aa31.14■■■□□ 2.58
ACACA-239ENST00000617548 ZNF530Q6P9A1 599 aaPredicted RBP31.14■■■□□ 2.58
ACACA-239ENST00000617548 TMOD3Q9NYL9 352 aa31.14■■■□□ 2.58
ACACA-239ENST00000617548 PIGBQ92521 554 aa31.13■■■□□ 2.57
ACACA-239ENST00000617548 KDRP35968 1356 aa31.13■■■□□ 2.57
ACACA-239ENST00000617548 ZBTB7AO95365 584 aa31.12■■■□□ 2.57
ACACA-239ENST00000617548 HSP90AB1P08238 724 aaKnown RBP31.12■■■□□ 2.57
ACACA-239ENST00000617548 SMARCC1Q92922 1105 aaPredicted RBP31.12■■■□□ 2.57
ACACA-239ENST00000617548 PALLDQ8WX93 1383 aa31.12■■■□□ 2.57
ACACA-239ENST00000617548 C1orf141Q5JVX7 400 aa31.11■■■□□ 2.57
ACACA-239ENST00000617548 HMOX1P09601 288 aa31.1■■■□□ 2.57
ACACA-239ENST00000617548 AKT1S1Q96B36 256 aa31.1■■■□□ 2.57
ACACA-239ENST00000617548 PPP1R1BQ9UD71 204 aaPredicted RBP31.1■■■□□ 2.57
ACACA-239ENST00000617548 DCAF5Q96JK2 942 aa31.09■■■□□ 2.57
ACACA-239ENST00000617548 TFCP2L1Q9NZI6 479 aa31.08■■■□□ 2.57
ACACA-239ENST00000617548 ATF5Q9Y2D1 282 aaPredicted RBP31.07■■■□□ 2.56
ACACA-239ENST00000617548 CFAP53Q96M91 514 aa31.06■■■□□ 2.56
ACACA-239ENST00000617548 ERVV-2B6SEH9 535 aa31.05■■■□□ 2.56
ACACA-239ENST00000617548 U2SURPO15042 1029 aaKnown RBP31.05■■■□□ 2.56
ACACA-239ENST00000617548 HMGB2P26583 209 aaKnown RBP31.05■■■□□ 2.56
ACACA-239ENST00000617548 COL3A1P02461 1466 aaPredicted RBP31.03■■■□□ 2.56
ACACA-239ENST00000617548 MTFR1LQ9H019 292 aa31.03■■■□□ 2.56
ACACA-239ENST00000617548 ASAP1Q9ULH1 1129 aa31.03■■■□□ 2.56
ACACA-239ENST00000617548 C5P01031 1676 aa31.01■■■□□ 2.55
ACACA-239ENST00000617548 PPP2R1AP30153 589 aa31.01■■■□□ 2.55
ACACA-239ENST00000617548 CABP4P57796 275 aa31.01■■■□□ 2.55
ACACA-239ENST00000617548 KDM6AO15550 1401 aaPredicted RBP31■■■□□ 2.55
ACACA-239ENST00000617548 PNPLA7Q6ZV29 1317 aa30.99■■■□□ 2.55
ACACA-239ENST00000617548 QSER1Q2KHR3 1735 aa30.99■■■□□ 2.55
ACACA-239ENST00000617548 LOC102724428A0A0B4J2F2 783 aa30.98■■■□□ 2.55
ACACA-239ENST00000617548 SIK1P57059 783 aa30.98■■■□□ 2.55
ACACA-239ENST00000617548 AKAP4Q5JQC9 854 aa30.98■■■□□ 2.55
ACACA-239ENST00000617548 ATG3Q9NT62 314 aa30.98■■■□□ 2.55
ACACA-239ENST00000617548 TUBGCP6Q96RT7 1819 aa30.97■■■□□ 2.55
ACACA-239ENST00000617548 TAF1LQ8IZX4 1826 aa30.96■■■□□ 2.55
ACACA-239ENST00000617548 MSH5O43196 834 aa30.96■■■□□ 2.55
ACACA-239ENST00000617548 PTGER2P43116 358 aa30.96■■■□□ 2.55
ACACA-239ENST00000617548 SLC16A10Q8TF71 515 aa30.95■■■□□ 2.55
ACACA-239ENST00000617548 NUDCQ9Y266 331 aa30.95■■■□□ 2.55
ACACA-239ENST00000617548 ATP6V1AP38606 617 aa30.93■■■□□ 2.54
ACACA-239ENST00000617548 MTHFSDQ2M296 383 aaKnown RBP30.93■■■□□ 2.54
ACACA-239ENST00000617548 AK7Q96M32 723 aa30.93■■■□□ 2.54
ACACA-239ENST00000617548 NFATC2IPQ8NCF5 419 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms