RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 STRN4Q9NRL3 753 aa20.7■□□□□ 0.9
DDB2-212ENST00000617022 WDR17Q8IZU2 1322 aa20.7■□□□□ 0.9
DDB2-212ENST00000617022 NUTM2BA6NNL0 878 aaPredicted RBP20.69■□□□□ 0.9
DDB2-212ENST00000617022 NUTM2EB1AL46 878 aaPredicted RBP20.69■□□□□ 0.9
DDB2-212ENST00000617022 NUTM2AQ8IVF1 878 aaPredicted RBP20.69■□□□□ 0.9
DDB2-212ENST00000617022 ADAMTS2O95450 1211 aa20.69■□□□□ 0.9
DDB2-212ENST00000617022 MCM10Q7L590 875 aa20.69■□□□□ 0.9
DDB2-212ENST00000617022 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
DDB2-212ENST00000617022 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
DDB2-212ENST00000617022 TOM1L2Q6ZVM7 507 aa20.68■□□□□ 0.9
DDB2-212ENST00000617022 MYH16Q9H6N6 1097 aa20.68■□□□□ 0.9
DDB2-212ENST00000617022 BTG4Q9NY30 223 aa20.68■□□□□ 0.9
DDB2-212ENST00000617022 RCAN3Q9UKA8 241 aa20.68■□□□□ 0.9
DDB2-212ENST00000617022 IL16Q14005 1332 aa20.68■□□□□ 0.9
DDB2-212ENST00000617022 COL14A1Q05707 1796 aaKnown RBP20.67■□□□□ 0.9
DDB2-212ENST00000617022 EVA1CP58658 441 aa20.67■□□□□ 0.9
DDB2-212ENST00000617022 LAS1LQ9Y4W2 734 aaKnown RBP20.67■□□□□ 0.9
DDB2-212ENST00000617022 LARP1Q6PKG0 1096 aaKnown RBP20.66■□□□□ 0.9
DDB2-212ENST00000617022 RAPGEF4Q8WZA2 1011 aa20.66■□□□□ 0.9
DDB2-212ENST00000617022 RTF1Q92541 710 aaKnown RBP20.66■□□□□ 0.9
DDB2-212ENST00000617022 MEGF6O75095 1541 aa20.65■□□□□ 0.9
DDB2-212ENST00000617022 GNAT3A8MTJ3 354 aa20.65■□□□□ 0.9
DDB2-212ENST00000617022 CALD1Q05682 793 aaKnown RBP20.65■□□□□ 0.9
DDB2-212ENST00000617022 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
DDB2-212ENST00000617022 JCADQ9P266 1359 aa20.64■□□□□ 0.9
DDB2-212ENST00000617022 MAP3K5Q99683 1374 aa20.64■□□□□ 0.89
DDB2-212ENST00000617022 AMOTQ4VCS5 1084 aa20.63■□□□□ 0.89
DDB2-212ENST00000617022 TATP17735 454 aaPredicted RBP20.63■□□□□ 0.89
DDB2-212ENST00000617022 ZNF530Q6P9A1 599 aaPredicted RBP20.63■□□□□ 0.89
DDB2-212ENST00000617022 HSPA1LP34931 641 aa20.62■□□□□ 0.89
DDB2-212ENST00000617022 IFT57Q9NWB7 429 aa20.62■□□□□ 0.89
DDB2-212ENST00000617022 GNAI1P63096 354 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 CARD10Q9BWT7 1032 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 PLCH1Q4KWH8 1693 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
DDB2-212ENST00000617022 ZNF853P0CG23 659 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 NBR1Q14596 966 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 USP35Q9P2H5 1018 aa20.61■□□□□ 0.89
DDB2-212ENST00000617022 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
DDB2-212ENST00000617022 IL17REQ8NFR9 667 aa20.6■□□□□ 0.89
DDB2-212ENST00000617022 CRB1P82279 1406 aa20.6■□□□□ 0.89
DDB2-212ENST00000617022 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
DDB2-212ENST00000617022 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
DDB2-212ENST00000617022 AKAP4Q5JQC9 854 aa20.59■□□□□ 0.89
DDB2-212ENST00000617022 C1orf141Q5JVX7 400 aa20.58■□□□□ 0.89
DDB2-212ENST00000617022 LRRC37A3O60309 1634 aa20.57■□□□□ 0.88
DDB2-212ENST00000617022 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
DDB2-212ENST00000617022 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
DDB2-212ENST00000617022 LGR6Q9HBX8 967 aa20.56■□□□□ 0.88
DDB2-212ENST00000617022 SPG7Q9UQ90 795 aa20.56■□□□□ 0.88
DDB2-212ENST00000617022 OVOS2A0A0G2JMS6 1433 aa20.56■□□□□ 0.88
DDB2-212ENST00000617022 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
DDB2-212ENST00000617022 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
DDB2-212ENST00000617022 IL2RBP14784 551 aa20.55■□□□□ 0.88
DDB2-212ENST00000617022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.883e-7■□□□□ 10.1
DDB2-212ENST00000617022 PARP4Q9UKK3 1724 aaKnown RBP20.55■□□□□ 0.88
DDB2-212ENST00000617022 PKD1L3Q7Z443 1732 aa20.54■□□□□ 0.88
DDB2-212ENST00000617022 NRAPQ86VF7 1730 aa20.54■□□□□ 0.88
DDB2-212ENST00000617022 CHL1O00533 1208 aa20.54■□□□□ 0.88
DDB2-212ENST00000617022 SPATA31A6Q5VVP1 1343 aa20.54■□□□□ 0.88
DDB2-212ENST00000617022 LRP6O75581 1613 aa20.54■□□□□ 0.88
DDB2-212ENST00000617022 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
DDB2-212ENST00000617022 BCAR3O75815 825 aa20.53■□□□□ 0.88
DDB2-212ENST00000617022 C8orf37Q96NL8 207 aa20.53■□□□□ 0.88
DDB2-212ENST00000617022 PLEKHG2Q9H7P9 1386 aa20.53■□□□□ 0.88
DDB2-212ENST00000617022 PLIN1O60240 522 aa20.53■□□□□ 0.88
DDB2-212ENST00000617022 IPO9Q96P70 1041 aaKnown RBP20.53■□□□□ 0.88
DDB2-212ENST00000617022 SLIT2O94813 1529 aa20.53■□□□□ 0.88
DDB2-212ENST00000617022 PHKG2P15735 406 aa20.52■□□□□ 0.88
DDB2-212ENST00000617022 CYP27B1O15528 508 aa20.52■□□□□ 0.88
DDB2-212ENST00000617022 B4GALNT3Q6L9W6 998 aa20.52■□□□□ 0.88
DDB2-212ENST00000617022 TSPYL4Q9UJ04 414 aa20.52■□□□□ 0.88
DDB2-212ENST00000617022 RNMTO43148 476 aaKnown RBP20.51■□□□□ 0.87
DDB2-212ENST00000617022 RARSP54136 660 aaKnown RBP20.51■□□□□ 0.87
DDB2-212ENST00000617022 IFNL2Q8IZJ0 200 aa20.51■□□□□ 0.87
DDB2-212ENST00000617022 ELL2O00472 640 aaPredicted RBP20.51■□□□□ 0.87
DDB2-212ENST00000617022 TSPYL6Q8N831 410 aa20.51■□□□□ 0.87
DDB2-212ENST00000617022 ZCRB1Q8TBF4 217 aaKnown RBP20.51■□□□□ 0.87
DDB2-212ENST00000617022 NGLY1Q96IV0 654 aa20.51■□□□□ 0.87
DDB2-212ENST00000617022 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
DDB2-212ENST00000617022 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
DDB2-212ENST00000617022 CT47B1P0C2W7 299 aaPredicted RBP20.5■□□□□ 0.87
DDB2-212ENST00000617022 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
DDB2-212ENST00000617022 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
DDB2-212ENST00000617022 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
DDB2-212ENST00000617022 C8orf58Q8NAV2 365 aa20.49■□□□□ 0.87
DDB2-212ENST00000617022 TEFQ10587 303 aa20.49■□□□□ 0.87
DDB2-212ENST00000617022 KRT24Q2M2I5 525 aa20.49■□□□□ 0.87
DDB2-212ENST00000617022 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
DDB2-212ENST00000617022 PCDH11XQ9BZA7 1347 aa20.48■□□□□ 0.87
DDB2-212ENST00000617022 PCDH11YQ9BZA8 1340 aa20.48■□□□□ 0.87
DDB2-212ENST00000617022 TWISTNBQ3B726 338 aaPredicted RBP20.47■□□□□ 0.87
DDB2-212ENST00000617022 ADAMTS7Q9UKP4 1686 aa20.47■□□□□ 0.87
DDB2-212ENST00000617022 DISP2A7MBM2 1401 aa20.47■□□□□ 0.87
DDB2-212ENST00000617022 SPATA31A1Q5TZJ5 1347 aa20.47■□□□□ 0.87
DDB2-212ENST00000617022 VAMP4O75379 141 aa20.46■□□□□ 0.87
DDB2-212ENST00000617022 CCDC9Q9Y3X0 531 aaKnown RBP20.46■□□□□ 0.87
DDB2-212ENST00000617022 SHANK3Q9BYB0 1731 aa20.46■□□□□ 0.87
DDB2-212ENST00000617022 UNC5CLQ8IV45 518 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms