RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
CBWD1-225ENST00000616944 BCL9LQ86UU0 1499 aa19.94■□□□□ 0.78
CBWD1-225ENST00000616944 OVOS2A0A0G2JMS6 1433 aa19.94■□□□□ 0.78
CBWD1-225ENST00000616944 EVA1CP58658 441 aa19.93■□□□□ 0.78
CBWD1-225ENST00000616944 GAS2L2Q8NHY3 880 aa19.93■□□□□ 0.78
CBWD1-225ENST00000616944 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
CBWD1-225ENST00000616944 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
CBWD1-225ENST00000616944 FNBP4Q8N3X1 1017 aaPredicted RBP19.91■□□□□ 0.78
CBWD1-225ENST00000616944 CDCA7LQ96GN5 454 aa19.91■□□□□ 0.78
CBWD1-225ENST00000616944 SCN11AQ9UI33 1791 aa19.91■□□□□ 0.78
CBWD1-225ENST00000616944 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
CBWD1-225ENST00000616944 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
CBWD1-225ENST00000616944 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
CBWD1-225ENST00000616944 AMOTQ4VCS5 1084 aa19.9■□□□□ 0.78
CBWD1-225ENST00000616944 C8orf37Q96NL8 207 aa19.9■□□□□ 0.78
CBWD1-225ENST00000616944 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
CBWD1-225ENST00000616944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■■■□ 25.6
CBWD1-225ENST00000616944 RGS17Q9UGC6 210 aaPredicted RBP19.9■□□□□ 0.78
CBWD1-225ENST00000616944 MAP3K5Q99683 1374 aa19.89■□□□□ 0.77
CBWD1-225ENST00000616944 TRMT2AQ8IZ69 625 aaKnown RBP19.89■□□□□ 0.77
CBWD1-225ENST00000616944 TATP17735 454 aaPredicted RBP19.88■□□□□ 0.77
CBWD1-225ENST00000616944 SLFN5Q08AF3 891 aa19.88■□□□□ 0.77
CBWD1-225ENST00000616944 PLEKHO1Q53GL0 409 aaPredicted RBP19.88■□□□□ 0.77
CBWD1-225ENST00000616944 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
CBWD1-225ENST00000616944 UNC5CLQ8IV45 518 aa19.87■□□□□ 0.77
CBWD1-225ENST00000616944 NGLY1Q96IV0 654 aa19.87■□□□□ 0.77
CBWD1-225ENST00000616944 IL16Q14005 1332 aa19.87■□□□□ 0.77
CBWD1-225ENST00000616944 SPATA31A1Q5TZJ5 1347 aa19.87■□□□□ 0.77
CBWD1-225ENST00000616944 HTATSF1O43719 755 aaKnown RBP19.87■□□□□ 0.77
CBWD1-225ENST00000616944 IL2RBP14784 551 aa19.86■□□□□ 0.77
CBWD1-225ENST00000616944 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
CBWD1-225ENST00000616944 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
CBWD1-225ENST00000616944 SPATA31A5Q5VU36 1347 aa19.86■□□□□ 0.77
CBWD1-225ENST00000616944 SPATA31A7Q8IWB4 1347 aa19.86■□□□□ 0.77
CBWD1-225ENST00000616944 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
CBWD1-225ENST00000616944 E9PSI1 815 aa19.85■□□□□ 0.77
CBWD1-225ENST00000616944 THUMPD2Q9BTF0 503 aaKnown RBP19.85■□□□□ 0.77
CBWD1-225ENST00000616944 CEMIPQ8WUJ3 1361 aa19.85■□□□□ 0.77
CBWD1-225ENST00000616944 DCTN1Q14203 1278 aa19.84■□□□□ 0.77
CBWD1-225ENST00000616944 ZNF530Q6P9A1 599 aaPredicted RBP19.84■□□□□ 0.77
CBWD1-225ENST00000616944 USP35Q9P2H5 1018 aa19.84■□□□□ 0.77
CBWD1-225ENST00000616944 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
CBWD1-225ENST00000616944 SPG7Q9UQ90 795 aa19.84■□□□□ 0.77
CBWD1-225ENST00000616944 VPS72Q15906 364 aa19.83■□□□□ 0.76
CBWD1-225ENST00000616944 MCM10Q7L590 875 aa19.83■□□□□ 0.76
CBWD1-225ENST00000616944 THRAP3Q9Y2W1 955 aaKnown RBP19.83■□□□□ 0.76
CBWD1-225ENST00000616944 GLI3P10071 1580 aa19.82■□□□□ 0.76
CBWD1-225ENST00000616944 AFF2P51816 1311 aa19.82■□□□□ 0.76
CBWD1-225ENST00000616944 THSD7AQ9UPZ6 1657 aa19.82■□□□□ 0.76
CBWD1-225ENST00000616944 ZNF853P0CG23 659 aa19.81■□□□□ 0.76
CBWD1-225ENST00000616944 CALD1Q05682 793 aaKnown RBP19.81■□□□□ 0.76
CBWD1-225ENST00000616944 IL17REQ8NFR9 667 aa19.81■□□□□ 0.76
CBWD1-225ENST00000616944 USP21Q9UK80 565 aa19.81■□□□□ 0.76
CBWD1-225ENST00000616944 KDM3BQ7LBC6 1761 aa19.81■□□□□ 0.76
CBWD1-225ENST00000616944 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
CBWD1-225ENST00000616944 CYP27B1O15528 508 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 PHKG2P15735 406 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 RTF1Q92541 710 aaKnown RBP19.8■□□□□ 0.76
CBWD1-225ENST00000616944 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 MRC1P22897 1456 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 ATRNO75882 1429 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 TNS2Q63HR2 1409 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 PCDH11XQ9BZA7 1347 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 PCDH11YQ9BZA8 1340 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 BARGINQ6ZT62 677 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 ZCRB1Q8TBF4 217 aaKnown RBP19.8■□□□□ 0.76
CBWD1-225ENST00000616944 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
CBWD1-225ENST00000616944 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
CBWD1-225ENST00000616944 IFNL2Q8IZJ0 200 aa19.78■□□□□ 0.76
CBWD1-225ENST00000616944 CFAP44Q96MT7 982 aa19.78■□□□□ 0.76
CBWD1-225ENST00000616944 CDCA7Q9BWT1 371 aaPredicted RBP19.78■□□□□ 0.76
CBWD1-225ENST00000616944 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
CBWD1-225ENST00000616944 POTEAQ6S8J7 498 aa19.77■□□□□ 0.76
CBWD1-225ENST00000616944 LGR6Q9HBX8 967 aa19.77■□□□□ 0.76
CBWD1-225ENST00000616944 GNAI1P63096 354 aa19.76■□□□□ 0.75
CBWD1-225ENST00000616944 RNMTO43148 476 aaKnown RBP19.76■□□□□ 0.75
CBWD1-225ENST00000616944 MPRIPQ6WCQ1 1025 aa19.76■□□□□ 0.75
CBWD1-225ENST00000616944 TSR2Q969E8 191 aaKnown RBP19.76■□□□□ 0.75
CBWD1-225ENST00000616944 ITGB4P16144 1822 aa19.75■□□□□ 0.75
CBWD1-225ENST00000616944 CHL1O00533 1208 aa19.75■□□□□ 0.75
CBWD1-225ENST00000616944 ZNF772Q68DY9 489 aaPredicted RBP19.75■□□□□ 0.75
CBWD1-225ENST00000616944 NKX1-1Q15270 411 aaPredicted RBP19.74■□□□□ 0.75
CBWD1-225ENST00000616944 MBIPQ9NS73 344 aa19.74■□□□□ 0.75
CBWD1-225ENST00000616944 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
CBWD1-225ENST00000616944 CCDC9Q9Y3X0 531 aaKnown RBP19.73■□□□□ 0.75
CBWD1-225ENST00000616944 HSP90AB1P08238 724 aaKnown RBP19.73■□□□□ 0.75
CBWD1-225ENST00000616944 PAPPAQ13219 1627 aa19.72■□□□□ 0.75
CBWD1-225ENST00000616944 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
CBWD1-225ENST00000616944 GJD4Q96KN9 370 aaPredicted RBP19.71■□□□□ 0.75
CBWD1-225ENST00000616944 BABAM1Q9NWV8 329 aa19.71■□□□□ 0.75
CBWD1-225ENST00000616944 TRPC5Q9UL62 973 aaPredicted RBP19.71■□□□□ 0.75
CBWD1-225ENST00000616944 LAS1LQ9Y4W2 734 aaKnown RBP19.71■□□□□ 0.75
CBWD1-225ENST00000616944 TAF7Q15545 349 aaPredicted RBP19.7■□□□□ 0.74
CBWD1-225ENST00000616944 EXOC5O00471 708 aa19.69■□□□□ 0.74
CBWD1-225ENST00000616944 FAM98CQ17RN3 349 aaKnown RBP19.69■□□□□ 0.74
CBWD1-225ENST00000616944 UBR2Q8IWV8 1755 aa19.69■□□□□ 0.74
CBWD1-225ENST00000616944 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
CBWD1-225ENST00000616944 DDB1Q16531 1140 aa19.69■□□□□ 0.74
CBWD1-225ENST00000616944 DDX54Q8TDD1 881 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms