RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
UBXN1-218ENST00000616865 COG3Q96JB2 828 aa20.55■□□□□ 0.88
UBXN1-218ENST00000616865 ARXQ96QS3 562 aa20.55■□□□□ 0.88
UBXN1-218ENST00000616865 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
UBXN1-218ENST00000616865 HOXC9P31274 260 aa20.54■□□□□ 0.88
UBXN1-218ENST00000616865 SLC27A3Q5K4L6 730 aa20.54■□□□□ 0.88
UBXN1-218ENST00000616865 MEGF6O75095 1541 aa20.53■□□□□ 0.88
UBXN1-218ENST00000616865 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
UBXN1-218ENST00000616865 RTL1A6NKG5 1358 aa20.53■□□□□ 0.88
UBXN1-218ENST00000616865 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
UBXN1-218ENST00000616865 NSD2O96028 1365 aa20.52■□□□□ 0.88
UBXN1-218ENST00000616865 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
UBXN1-218ENST00000616865 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
UBXN1-218ENST00000616865 KIF20BQ96Q89 1820 aa20.5■□□□□ 0.87
UBXN1-218ENST00000616865 AMPHP49418 695 aa20.5■□□□□ 0.87
UBXN1-218ENST00000616865 ZNF784Q8NCA9 323 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-218ENST00000616865 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-218ENST00000616865 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
UBXN1-218ENST00000616865 FBLN1P23142 703 aa20.49■□□□□ 0.87
UBXN1-218ENST00000616865 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
UBXN1-218ENST00000616865 PRIM1P49642 420 aaKnown RBP20.47■□□□□ 0.87
UBXN1-218ENST00000616865 ZCRB1Q8TBF4 217 aaKnown RBP20.47■□□□□ 0.87
UBXN1-218ENST00000616865 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
UBXN1-218ENST00000616865 POLD1P28340 1107 aa20.45■□□□□ 0.86
UBXN1-218ENST00000616865 KCNQ4P56696 695 aa20.45■□□□□ 0.86
UBXN1-218ENST00000616865 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
UBXN1-218ENST00000616865 C5P01031 1676 aa20.45■□□□□ 0.86
UBXN1-218ENST00000616865 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
UBXN1-218ENST00000616865 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
UBXN1-218ENST00000616865 KLHL34Q8N239 644 aa20.43■□□□□ 0.86
UBXN1-218ENST00000616865 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
UBXN1-218ENST00000616865 CGNL1Q0VF96 1302 aa20.43■□□□□ 0.86
UBXN1-218ENST00000616865 GOLGB1Q14789 3259 aaKnown RBP20.42■□□□□ 0.86
UBXN1-218ENST00000616865 ZNF316A6NFI3 1004 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-218ENST00000616865 FYB1O15117 783 aa20.42■□□□□ 0.86
UBXN1-218ENST00000616865 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
UBXN1-218ENST00000616865 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-218ENST00000616865 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
UBXN1-218ENST00000616865 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
UBXN1-218ENST00000616865 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
UBXN1-218ENST00000616865 GPR162Q16538 588 aa20.4■□□□□ 0.86
UBXN1-218ENST00000616865 PKD1L3Q7Z443 1732 aa20.39■□□□□ 0.86
UBXN1-218ENST00000616865 INSRP06213 1382 aa20.39■□□□□ 0.85
UBXN1-218ENST00000616865 FLT4P35916 1363 aa20.39■□□□□ 0.85
UBXN1-218ENST00000616865 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
UBXN1-218ENST00000616865 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
UBXN1-218ENST00000616865 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
UBXN1-218ENST00000616865 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
UBXN1-218ENST00000616865 ITGB4P16144 1822 aa20.37■□□□□ 0.85
UBXN1-218ENST00000616865 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
UBXN1-218ENST00000616865 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
UBXN1-218ENST00000616865 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-218ENST00000616865 HSP90AB2PQ58FF8 381 aa20.36■□□□□ 0.85
UBXN1-218ENST00000616865 NLGN2Q8NFZ4 835 aa20.36■□□□□ 0.85
UBXN1-218ENST00000616865 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
UBXN1-218ENST00000616865 COL23A1Q86Y22 540 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-218ENST00000616865 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
UBXN1-218ENST00000616865 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
UBXN1-218ENST00000616865 C4BP0C0L5 1744 aa20.33■□□□□ 0.85
UBXN1-218ENST00000616865 MSH5O43196 834 aa20.33■□□□□ 0.85
UBXN1-218ENST00000616865 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
UBXN1-218ENST00000616865 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
UBXN1-218ENST00000616865 NSD3Q9BZ95 1437 aa20.32■□□□□ 0.84
UBXN1-218ENST00000616865 UBR3Q6ZT12 1888 aa20.3■□□□□ 0.84
UBXN1-218ENST00000616865 CYP27B1O15528 508 aa20.3■□□□□ 0.84
UBXN1-218ENST00000616865 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
UBXN1-218ENST00000616865 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
UBXN1-218ENST00000616865 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
UBXN1-218ENST00000616865 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
UBXN1-218ENST00000616865 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
UBXN1-218ENST00000616865 HMGB2P26583 209 aaKnown RBP20.28■□□□□ 0.84
UBXN1-218ENST00000616865 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
UBXN1-218ENST00000616865 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
UBXN1-218ENST00000616865 CARD14Q9BXL6 1004 aa20.27■□□□□ 0.84
UBXN1-218ENST00000616865 GRIN3BO60391 1043 aa20.26■□□□□ 0.83
UBXN1-218ENST00000616865 GIGYF1O75420 1035 aaPredicted RBP20.26■□□□□ 0.83
UBXN1-218ENST00000616865 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
UBXN1-218ENST00000616865 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
UBXN1-218ENST00000616865 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-218ENST00000616865 AK7Q96M32 723 aa20.23■□□□□ 0.83
UBXN1-218ENST00000616865 PANK3Q9H999 370 aa20.23■□□□□ 0.83
UBXN1-218ENST00000616865 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
UBXN1-218ENST00000616865 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
UBXN1-218ENST00000616865 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
UBXN1-218ENST00000616865 PIGBQ92521 554 aa20.21■□□□□ 0.83
UBXN1-218ENST00000616865 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
UBXN1-218ENST00000616865 PHF14O94880 888 aa20.19■□□□□ 0.82
UBXN1-218ENST00000616865 EYA1Q99502 592 aa20.19■□□□□ 0.82
UBXN1-218ENST00000616865 ATP10DQ9P241 1426 aa20.19■□□□□ 0.82
UBXN1-218ENST00000616865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
UBXN1-218ENST00000616865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.82
UBXN1-218ENST00000616865 KNSTRNQ9Y448 316 aa20.18■□□□□ 0.82
UBXN1-218ENST00000616865 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
UBXN1-218ENST00000616865 SSFA2P28290 1259 aa20.17■□□□□ 0.82
UBXN1-218ENST00000616865 SIK1P57059 783 aa20.17■□□□□ 0.82
UBXN1-218ENST00000616865 LINC00116Q8NCU8 138 aa20.17■□□□□ 0.82
UBXN1-218ENST00000616865 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
UBXN1-218ENST00000616865 PLEKHG2Q9H7P9 1386 aa20.17■□□□□ 0.82
UBXN1-218ENST00000616865 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
UBXN1-218ENST00000616865 ADCY9O60503 1353 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms