RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 ACSBG1Q96GR2 724 aa23.25■■□□□ 1.31
LHX1-202ENST00000616237 RAPGEF4Q8WZA2 1011 aa23.24■■□□□ 1.31
LHX1-202ENST00000616237 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
LHX1-202ENST00000616237 PLSCR1O15162 318 aa23.22■■□□□ 1.31
LHX1-202ENST00000616237 TATP17735 454 aaPredicted RBP23.22■■□□□ 1.31
LHX1-202ENST00000616237 NPC1L1Q9UHC9 1359 aa23.22■■□□□ 1.31
LHX1-202ENST00000616237 NHSQ6T4R5 1651 aa23.21■■□□□ 1.31
LHX1-202ENST00000616237 RREB1Q92766 1687 aa23.21■■□□□ 1.31
LHX1-202ENST00000616237 PROM2Q8N271 834 aa23.19■■□□□ 1.3
LHX1-202ENST00000616237 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
LHX1-202ENST00000616237 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
LHX1-202ENST00000616237 CNGB1Q14028 1251 aaPredicted RBP23.18■■□□□ 1.3
LHX1-202ENST00000616237 PSDA5PKW4 1024 aaPredicted RBP23.17■■□□□ 1.3
LHX1-202ENST00000616237 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
LHX1-202ENST00000616237 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
LHX1-202ENST00000616237 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
LHX1-202ENST00000616237 MTHFSP49914 203 aa23.16■■□□□ 1.3
LHX1-202ENST00000616237 CYP27B1O15528 508 aa23.15■■□□□ 1.3
LHX1-202ENST00000616237 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
LHX1-202ENST00000616237 IL13P35225 146 aa23.14■■□□□ 1.3
LHX1-202ENST00000616237 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.3
LHX1-202ENST00000616237 PCDH11XQ9BZA7 1347 aa23.14■■□□□ 1.29
LHX1-202ENST00000616237 PCDH11YQ9BZA8 1340 aa23.14■■□□□ 1.29
LHX1-202ENST00000616237 PRIM1P49642 420 aaKnown RBP23.14■■□□□ 1.29
LHX1-202ENST00000616237 R3HDM1Q15032 1099 aaKnown RBP23.14■■□□□ 1.29
LHX1-202ENST00000616237 BTAF1O14981 1849 aa23.13■■□□□ 1.29
LHX1-202ENST00000616237 DOT1LQ8TEK3 1739 aa23.13■■□□□ 1.29
LHX1-202ENST00000616237 TXNRD1Q16881 649 aa23.12■■□□□ 1.29
LHX1-202ENST00000616237 AEBP1Q8IUX7 1158 aa23.12■■□□□ 1.29
LHX1-202ENST00000616237 SYTL4Q96C24 671 aaPredicted RBP23.1■■□□□ 1.29
LHX1-202ENST00000616237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.29
LHX1-202ENST00000616237 ANO8Q9HCE9 1232 aaPredicted RBP23.09■■□□□ 1.29
LHX1-202ENST00000616237 SPG7Q9UQ90 795 aa23.09■■□□□ 1.29
LHX1-202ENST00000616237 NKX1-1Q15270 411 aaPredicted RBP23.07■■□□□ 1.28
LHX1-202ENST00000616237 SULT6B1Q6IMI4 303 aa23.07■■□□□ 1.28
LHX1-202ENST00000616237 KDRP35968 1356 aa23.07■■□□□ 1.28
LHX1-202ENST00000616237 TOGARAM1Q9Y4F4 1720 aa23.06■■□□□ 1.28
LHX1-202ENST00000616237 NBPF14Q5TI25 921 aa23.06■■□□□ 1.28
LHX1-202ENST00000616237 COL3A1P02461 1466 aaPredicted RBP23.06■■□□□ 1.28
LHX1-202ENST00000616237 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
LHX1-202ENST00000616237 PHKG2P15735 406 aa23.05■■□□□ 1.28
LHX1-202ENST00000616237 LRRC4BQ9NT99 713 aa23.04■■□□□ 1.28
LHX1-202ENST00000616237 DIAPH1O60610 1272 aaKnown RBP23.02■■□□□ 1.28
LHX1-202ENST00000616237 IFNL2Q8IZJ0 200 aa23.02■■□□□ 1.28
LHX1-202ENST00000616237 PPP2R1AP30153 589 aa23.01■■□□□ 1.27
LHX1-202ENST00000616237 PLEKHO1Q53GL0 409 aaPredicted RBP23.01■■□□□ 1.27
LHX1-202ENST00000616237 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
LHX1-202ENST00000616237 PAPPAQ13219 1627 aa23.01■■□□□ 1.27
LHX1-202ENST00000616237 HMOX1P09601 288 aa23■■□□□ 1.27
LHX1-202ENST00000616237 KCNQ4P56696 695 aa23■■□□□ 1.27
LHX1-202ENST00000616237 ITGB4P16144 1822 aa22.99■■□□□ 1.27
LHX1-202ENST00000616237 LY75O60449 1722 aa22.98■■□□□ 1.27
LHX1-202ENST00000616237 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
LHX1-202ENST00000616237 AMOTQ4VCS5 1084 aa22.98■■□□□ 1.27
LHX1-202ENST00000616237 PIGBQ92521 554 aa22.98■■□□□ 1.27
LHX1-202ENST00000616237 PDGFDQ9GZP0 370 aaPredicted RBP22.98■■□□□ 1.27
LHX1-202ENST00000616237 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
LHX1-202ENST00000616237 SLC15A2Q16348 729 aa22.97■■□□□ 1.27
LHX1-202ENST00000616237 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
LHX1-202ENST00000616237 SLC27A3Q5K4L6 730 aa22.96■■□□□ 1.27
LHX1-202ENST00000616237 ZNF827Q17R98 1081 aa22.95■■□□□ 1.26
LHX1-202ENST00000616237 STK32BQ9NY57 414 aa22.95■■□□□ 1.26
LHX1-202ENST00000616237 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
LHX1-202ENST00000616237 LRP5O75197 1615 aa22.95■■□□□ 1.26
LHX1-202ENST00000616237 U2SURPO15042 1029 aaKnown RBP22.93■■□□□ 1.26
LHX1-202ENST00000616237 CASZ1Q86V15 1759 aa22.93■■□□□ 1.26
LHX1-202ENST00000616237 PALLDQ8WX93 1383 aa22.92■■□□□ 1.26
LHX1-202ENST00000616237 AKT1S1Q96B36 256 aa22.92■■□□□ 1.26
LHX1-202ENST00000616237 DCAF5Q96JK2 942 aa22.92■■□□□ 1.26
LHX1-202ENST00000616237 CCNL1Q9UK58 526 aaPredicted RBP22.92■■□□□ 1.26
LHX1-202ENST00000616237 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
LHX1-202ENST00000616237 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
LHX1-202ENST00000616237 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
LHX1-202ENST00000616237 ERVV-2B6SEH9 535 aa22.89■■□□□ 1.26
LHX1-202ENST00000616237 MTHFSDQ2M296 383 aaKnown RBP22.89■■□□□ 1.26
LHX1-202ENST00000616237 C1orf141Q5JVX7 400 aa22.89■■□□□ 1.26
LHX1-202ENST00000616237 ASAP1Q9ULH1 1129 aa22.89■■□□□ 1.26
LHX1-202ENST00000616237 SMARCC1Q92922 1105 aaPredicted RBP22.88■■□□□ 1.25
LHX1-202ENST00000616237 ATG3Q9NT62 314 aa22.88■■□□□ 1.25
LHX1-202ENST00000616237 AKAP4Q5JQC9 854 aa22.87■■□□□ 1.25
LHX1-202ENST00000616237 RSPH6AQ9H0K4 717 aa22.85■■□□□ 1.25
LHX1-202ENST00000616237 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
LHX1-202ENST00000616237 ZBTB7AO95365 584 aa22.84■■□□□ 1.25
LHX1-202ENST00000616237 SIK1P57059 783 aa22.84■■□□□ 1.25
LHX1-202ENST00000616237 CABP4P57796 275 aa22.84■■□□□ 1.25
LHX1-202ENST00000616237 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
LHX1-202ENST00000616237 PNPLA7Q6ZV29 1317 aa22.83■■□□□ 1.25
LHX1-202ENST00000616237 NFATC2IPQ8NCF5 419 aa22.83■■□□□ 1.25
LHX1-202ENST00000616237 PHACTR3Q96KR7 559 aa22.83■■□□□ 1.25
LHX1-202ENST00000616237 SPON1Q9HCB6 807 aa22.83■■□□□ 1.25
LHX1-202ENST00000616237 NUDCQ9Y266 331 aa22.83■■□□□ 1.25
LHX1-202ENST00000616237 TUBGCP6Q96RT7 1819 aa22.83■■□□□ 1.25
LHX1-202ENST00000616237 C5P01031 1676 aa22.83■■□□□ 1.24
LHX1-202ENST00000616237 SCN11AQ9UI33 1791 aa22.83■■□□□ 1.24
LHX1-202ENST00000616237 TAF1LQ8IZX4 1826 aa22.82■■□□□ 1.24
LHX1-202ENST00000616237 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
LHX1-202ENST00000616237 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
LHX1-202ENST00000616237 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
LHX1-202ENST00000616237 RALBP1Q15311 655 aa22.81■■□□□ 1.24
LHX1-202ENST00000616237 SLC4A9Q96Q91 983 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms