RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PRDM15P57071 1507 aaPredicted RBP6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 XRCC6P12956 609 aaKnown RBP eCLIP6.82□□□□□ -1.324e-6■■■■□ 25.4
SYNCRIP-204ENST00000616122 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 CWC22Q9HCG8 908 aaKnown RBP6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 ZMYM3Q14202 1370 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 MLH3Q9UHC1 1453 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 EIF2AK4Q9P2K8 1649 aaKnown RBP6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 G2E3Q7L622 706 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 TTC22Q5TAA0 569 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 FAM43AQ8N2R8 423 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 DNAAF4Q8WXU2 420 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 CDK11BP21127 795 aaKnown RBP6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 LTKP29376 864 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 RNF20Q5VTR2 975 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 CEP85Q6P2H3 762 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 KCNH5Q8NCM2 988 aa6.82□□□□□ -1.32
SYNCRIP-204ENST00000616122 USP19O94966 1318 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 PPP1R42Q7Z4L9 355 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 DBF4Q9UBU7 674 aaPredicted RBP6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 MAST1Q9Y2H9 1570 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 PPIP5K1Q6PFW1 1433 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 SNX21Q969T3 373 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 FIBPO43427 364 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 GLRX3O76003 335 aaKnown RBP6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 PANK2Q9BZ23 570 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 PBRM1Q86U86 1689 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 FSD1Q9BTV5 496 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 ANO8Q9HCE9 1232 aaPredicted RBP6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 TTC21AQ8NDW8 1320 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 KIF3AQ9Y496 699 aa6.81□□□□□ -1.32
SYNCRIP-204ENST00000616122 FLT4P35916 1363 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 TTC37Q6PGP7 1564 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 BCORL1Q5H9F3 1711 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 TAF7LQ5H9L4 462 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 ATF3P18847 181 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 NEUROD6Q96NK8 337 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 PHF14O94880 888 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 SIRT1Q96EB6 747 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 ABCC1P33527 1531 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 RHPN1Q8TCX5 695 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 ZFYVE9O95405 1425 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 ZNF853P0CG23 659 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 CWC27Q6UX04 472 aaKnown RBP6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 SIL1Q9H173 461 aa6.8□□□□□ -1.32
SYNCRIP-204ENST00000616122 HTATSF1O43719 755 aaKnown RBP6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 PRDM11Q9NQV5 511 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 MYOM2P54296 1465 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 BTBD11A6QL63 1104 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 PDCP20941 246 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 KLHL40Q2TBA0 621 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 NEO1Q92859 1461 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 PRR36Q9H6K5 1346 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 ECHDC1Q9NTX5 307 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 TRPM2O94759 1503 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 DDX54Q8TDD1 881 aaKnown RBP6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 WDR33Q9C0J8 1336 aaKnown RBP6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 METP08581 1390 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 TATP17735 454 aaPredicted RBP6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 ATP8B2P98198 1209 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
SYNCRIP-204ENST00000616122 CSPP1Q1MSJ5 1256 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 AMOTQ4VCS5 1084 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 SIRT2Q8IXJ6 389 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 MAP4K4O95819 1239 aaPredicted RBP6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 AACSQ86V21 672 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 FAM184AQ8NB25 1140 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 ABCC4O15439 1325 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 ERC1Q8IUD2 1116 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 TMEM2Q9UHN6 1383 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 HSP90B1P14625 803 aaKnown RBP6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 SPG7Q9UQ90 795 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 CYP46A1Q9Y6A2 500 aa6.78□□□□□ -1.32
SYNCRIP-204ENST00000616122 ANTXR1Q9H6X2 564 aa6.77□□□□□ -1.32
SYNCRIP-204ENST00000616122 GCP02774 474 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 BLOC1S2Q6QNY1 142 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 MPNDQ8N594 471 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 TMX3Q96JJ7 454 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 PHAXQ9H814 394 aaKnown RBP6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 GDPD2Q9HCC8 539 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 NRDCO43847 1150 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 MYL6BP14649 208 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 LINS1Q8NG48 757 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 SF3A1Q15459 793 aaKnown RBP6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 DRC7Q8IY82 874 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 ARHGAP31Q2M1Z3 1444 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 LARP1Q6PKG0 1096 aaKnown RBP6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 ZGPATQ8N5A5 531 aaKnown RBP6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 USP44Q9H0E7 712 aa6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 IL17REQ8NFR9 667 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms