RNA–Protein interactions for RNA: ENST00000616084.1

PCIF1-203, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 2

Gene PCIF1, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-203ENST00000616084 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
PCIF1-203ENST00000616084 PKD1L3Q7Z443 1732 aa15.76■□□□□ 0.11
PCIF1-203ENST00000616084 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
PCIF1-203ENST00000616084 U2SURPO15042 1029 aaKnown RBP15.75■□□□□ 0.11
PCIF1-203ENST00000616084 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
PCIF1-203ENST00000616084 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
PCIF1-203ENST00000616084 NUDCQ9Y266 331 aa15.74■□□□□ 0.11
PCIF1-203ENST00000616084 MYBBP1AQ9BQG0 1328 aaKnown RBP15.73■□□□□ 0.11
PCIF1-203ENST00000616084 TRIM37O94972 964 aa15.73■□□□□ 0.11
PCIF1-203ENST00000616084 HMOX1P09601 288 aa15.73■□□□□ 0.11
PCIF1-203ENST00000616084 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
PCIF1-203ENST00000616084 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
PCIF1-203ENST00000616084 TNS1Q9HBL0 1735 aaKnown RBP15.72■□□□□ 0.11
PCIF1-203ENST00000616084 CCDC125Q86Z20 511 aa15.72■□□□□ 0.11
PCIF1-203ENST00000616084 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
PCIF1-203ENST00000616084 PCDH11XQ9BZA7 1347 aa15.71■□□□□ 0.11
PCIF1-203ENST00000616084 PCDH11YQ9BZA8 1340 aa15.71■□□□□ 0.11
PCIF1-203ENST00000616084 DOT1LQ8TEK3 1739 aa15.71■□□□□ 0.1
PCIF1-203ENST00000616084 VIRMAQ69YN4 1812 aaKnown RBP15.71■□□□□ 0.1
PCIF1-203ENST00000616084 PLEKHO1Q53GL0 409 aaPredicted RBP15.7■□□□□ 0.1
PCIF1-203ENST00000616084 ANP32CO43423 234 aa15.69■□□□□ 0.1
PCIF1-203ENST00000616084 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
PCIF1-203ENST00000616084 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCIF1-203ENST00000616084 ACSBG1Q96GR2 724 aa15.69■□□□□ 0.1
PCIF1-203ENST00000616084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCIF1-203ENST00000616084 KDRP35968 1356 aa15.69■□□□□ 0.1
PCIF1-203ENST00000616084 NHSQ6T4R5 1651 aa15.69■□□□□ 0.1
PCIF1-203ENST00000616084 ITGB4P16144 1822 aa15.68■□□□□ 0.1
PCIF1-203ENST00000616084 BTAF1O14981 1849 aa15.68■□□□□ 0.1
PCIF1-203ENST00000616084 BCL9O00512 1426 aa15.68■□□□□ 0.1
PCIF1-203ENST00000616084 PLEKHG2Q9H7P9 1386 aa15.67■□□□□ 0.1
PCIF1-203ENST00000616084 CYP27B1O15528 508 aa15.67■□□□□ 0.1
PCIF1-203ENST00000616084 BAG6P46379 1132 aa15.67■□□□□ 0.1
PCIF1-203ENST00000616084 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
PCIF1-203ENST00000616084 EP400Q96L91 3159 aa15.66■□□□□ 0.1
PCIF1-203ENST00000616084 APBA3O96018 575 aa15.66■□□□□ 0.1
PCIF1-203ENST00000616084 ZNF530Q6P9A1 599 aaPredicted RBP15.66■□□□□ 0.1
PCIF1-203ENST00000616084 DEFB132Q7Z7B7 95 aa15.66■□□□□ 0.1
PCIF1-203ENST00000616084 IFNL2Q8IZJ0 200 aa15.66■□□□□ 0.1
PCIF1-203ENST00000616084 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
PCIF1-203ENST00000616084 SYTL4Q96C24 671 aaPredicted RBP15.65■□□□□ 0.1
PCIF1-203ENST00000616084 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
PCIF1-203ENST00000616084 KCNQ2O43526 872 aa15.64■□□□□ 0.09
PCIF1-203ENST00000616084 PHKG2P15735 406 aa15.64■□□□□ 0.09
PCIF1-203ENST00000616084 TOGARAM1Q9Y4F4 1720 aa15.64■□□□□ 0.09
PCIF1-203ENST00000616084 SCN11AQ9UI33 1791 aa15.63■□□□□ 0.09
PCIF1-203ENST00000616084 PRKAR2BP31323 418 aa15.63■□□□□ 0.09
PCIF1-203ENST00000616084 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
PCIF1-203ENST00000616084 EN1Q05925 392 aaPredicted RBP15.63■□□□□ 0.09
PCIF1-203ENST00000616084 PTF1AQ7RTS3 328 aa15.63■□□□□ 0.09
PCIF1-203ENST00000616084 RSPH6AQ9H0K4 717 aa15.63■□□□□ 0.09
PCIF1-203ENST00000616084 NEFMP07197 916 aa15.62■□□□□ 0.09
PCIF1-203ENST00000616084 HSP90AB1P08238 724 aaKnown RBP15.62■□□□□ 0.09
PCIF1-203ENST00000616084 DLG5Q8TDM6 1919 aa15.61■□□□□ 0.09
PCIF1-203ENST00000616084 FCHSD2O94868 740 aa15.61■□□□□ 0.09
PCIF1-203ENST00000616084 WDR43Q15061 677 aaKnown RBP eCLIP15.61■□□□□ 0.09
PCIF1-203ENST00000616084 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
PCIF1-203ENST00000616084 RGPD3A6NKT7 1758 aaPredicted RBP15.6■□□□□ 0.09
PCIF1-203ENST00000616084 RGPD4Q7Z3J3 1758 aa15.6■□□□□ 0.09
PCIF1-203ENST00000616084 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
PCIF1-203ENST00000616084 GAS2L2Q8NHY3 880 aa15.6■□□□□ 0.09
PCIF1-203ENST00000616084 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
PCIF1-203ENST00000616084 EZH2Q15910 746 aaKnown RBP15.59■□□□□ 0.09
PCIF1-203ENST00000616084 AKAP4Q5JQC9 854 aa15.59■□□□□ 0.09
PCIF1-203ENST00000616084 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.08
PCIF1-203ENST00000616084 DCAF5Q96JK2 942 aa15.58■□□□□ 0.08
PCIF1-203ENST00000616084 RREB1Q92766 1687 aa15.57■□□□□ 0.08
PCIF1-203ENST00000616084 PLSCR1O15162 318 aa15.57■□□□□ 0.08
PCIF1-203ENST00000616084 PHACTR3Q96KR7 559 aa15.57■□□□□ 0.08
PCIF1-203ENST00000616084 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
PCIF1-203ENST00000616084 MAPK8IP3Q9UPT6 1336 aa15.57■□□□□ 0.08
PCIF1-203ENST00000616084 CAMKK2Q96RR4 588 aa15.56■□□□□ 0.08
PCIF1-203ENST00000616084 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
PCIF1-203ENST00000616084 KDM6AO15550 1401 aaPredicted RBP15.56■□□□□ 0.08
PCIF1-203ENST00000616084 NUP188Q5SRE5 1749 aa15.56■□□□□ 0.08
PCIF1-203ENST00000616084 LY75O60449 1722 aa15.55■□□□□ 0.08
PCIF1-203ENST00000616084 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
PCIF1-203ENST00000616084 ERVV-2B6SEH9 535 aa15.55■□□□□ 0.08
PCIF1-203ENST00000616084 CABP4P57796 275 aa15.55■□□□□ 0.08
PCIF1-203ENST00000616084 CCDC184Q52MB2 194 aa15.55■□□□□ 0.08
PCIF1-203ENST00000616084 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
PCIF1-203ENST00000616084 PIGBQ92521 554 aa15.54■□□□□ 0.08
PCIF1-203ENST00000616084 RNMTO43148 476 aaKnown RBP15.53■□□□□ 0.08
PCIF1-203ENST00000616084 TXNRD1Q16881 649 aa15.53■□□□□ 0.08
PCIF1-203ENST00000616084 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
PCIF1-203ENST00000616084 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
PCIF1-203ENST00000616084 ADAMTS7Q9UKP4 1686 aa15.52■□□□□ 0.08
PCIF1-203ENST00000616084 DIEXFQ68CQ4 756 aaKnown RBP15.52■□□□□ 0.08
PCIF1-203ENST00000616084 CCDC146Q8IYE0 955 aa15.52■□□□□ 0.08
PCIF1-203ENST00000616084 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
PCIF1-203ENST00000616084 SMARCC1Q92922 1105 aaPredicted RBP15.52■□□□□ 0.08
PCIF1-203ENST00000616084 LGR6Q9HBX8 967 aa15.52■□□□□ 0.08
PCIF1-203ENST00000616084 PALLDQ8WX93 1383 aa15.5■□□□□ 0.07
PCIF1-203ENST00000616084 TAF1LQ8IZX4 1826 aa15.5■□□□□ 0.07
PCIF1-203ENST00000616084 SIPA1L3O60292 1781 aaPredicted RBP15.5■□□□□ 0.07
PCIF1-203ENST00000616084 TEFQ10587 303 aa15.5■□□□□ 0.07
PCIF1-203ENST00000616084 NFE2L2Q16236 605 aa15.5■□□□□ 0.07
PCIF1-203ENST00000616084 NFATC2IPQ8NCF5 419 aa15.5■□□□□ 0.07
PCIF1-203ENST00000616084 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
PCIF1-203ENST00000616084 PROM2Q8N271 834 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms