RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
LINC00649-217ENST00000616030 POLKQ9UBT6 870 aa14.3□□□□□ -0.12
LINC00649-217ENST00000616030 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
LINC00649-217ENST00000616030 PTF1AQ7RTS3 328 aa14.29□□□□□ -0.12
LINC00649-217ENST00000616030 LTV1Q96GA3 475 aaPredicted RBP14.29□□□□□ -0.12
LINC00649-217ENST00000616030 NPC1L1Q9UHC9 1359 aa14.29□□□□□ -0.12
LINC00649-217ENST00000616030 CASZ1Q86V15 1759 aa14.28□□□□□ -0.12
LINC00649-217ENST00000616030 LY75O60449 1722 aa14.27□□□□□ -0.12
LINC00649-217ENST00000616030 PER1O15534 1290 aaPredicted RBP14.27□□□□□ -0.13
LINC00649-217ENST00000616030 PROM2Q8N271 834 aa14.26□□□□□ -0.13
LINC00649-217ENST00000616030 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
LINC00649-217ENST00000616030 QSER1Q2KHR3 1735 aa14.26□□□□□ -0.13
LINC00649-217ENST00000616030 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 TOGARAM1Q9Y4F4 1720 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 KCNQ2O43526 872 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 RAPGEF4Q8WZA2 1011 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
LINC00649-217ENST00000616030 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
LINC00649-217ENST00000616030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00649-217ENST00000616030 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
LINC00649-217ENST00000616030 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
LINC00649-217ENST00000616030 EIF4A2Q14240 407 aaKnown RBP14.23□□□□□ -0.13
LINC00649-217ENST00000616030 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
LINC00649-217ENST00000616030 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
LINC00649-217ENST00000616030 USHBP1Q8N6Y0 703 aa14.23□□□□□ -0.13
LINC00649-217ENST00000616030 EYA1Q99502 592 aa14.23□□□□□ -0.13
LINC00649-217ENST00000616030 PSDA5PKW4 1024 aaPredicted RBP14.22□□□□□ -0.13
LINC00649-217ENST00000616030 TXNRD1Q16881 649 aa14.22□□□□□ -0.13
LINC00649-217ENST00000616030 ANO8Q9HCE9 1232 aaPredicted RBP14.22□□□□□ -0.13
LINC00649-217ENST00000616030 KDRP35968 1356 aa14.22□□□□□ -0.13
LINC00649-217ENST00000616030 ITGB4P16144 1822 aa14.21□□□□□ -0.13
LINC00649-217ENST00000616030 NKX1-1Q15270 411 aaPredicted RBP14.21□□□□□ -0.13
LINC00649-217ENST00000616030 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
LINC00649-217ENST00000616030 CYP27B1O15528 508 aa14.2□□□□□ -0.14
LINC00649-217ENST00000616030 MORC1Q86VD1 984 aa14.2□□□□□ -0.14
LINC00649-217ENST00000616030 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
LINC00649-217ENST00000616030 COL24A1Q17RW2 1714 aa14.19□□□□□ -0.14
LINC00649-217ENST00000616030 SLC27A3Q5K4L6 730 aa14.19□□□□□ -0.14
LINC00649-217ENST00000616030 PPM1GO15355 546 aaPredicted RBP14.18□□□□□ -0.14
LINC00649-217ENST00000616030 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
LINC00649-217ENST00000616030 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
LINC00649-217ENST00000616030 TNNT2P45379 298 aaPredicted RBP14.17□□□□□ -0.14
LINC00649-217ENST00000616030 PRIM1P49642 420 aaKnown RBP14.17□□□□□ -0.14
LINC00649-217ENST00000616030 SPG7Q9UQ90 795 aa14.17□□□□□ -0.14
LINC00649-217ENST00000616030 TUBGCP6Q96RT7 1819 aa14.17□□□□□ -0.14
LINC00649-217ENST00000616030 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
LINC00649-217ENST00000616030 TAF1LQ8IZX4 1826 aa14.16□□□□□ -0.14
LINC00649-217ENST00000616030 SLC15A2Q16348 729 aa14.16□□□□□ -0.14
LINC00649-217ENST00000616030 LRRC4BQ9NT99 713 aa14.16□□□□□ -0.14
LINC00649-217ENST00000616030 C5P01031 1676 aa14.15□□□□□ -0.14
LINC00649-217ENST00000616030 IL13P35225 146 aa14.15□□□□□ -0.14
LINC00649-217ENST00000616030 DDX10Q13206 875 aaKnown RBP14.14□□□□□ -0.15
LINC00649-217ENST00000616030 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
LINC00649-217ENST00000616030 STK32BQ9NY57 414 aa14.14□□□□□ -0.15
LINC00649-217ENST00000616030 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
LINC00649-217ENST00000616030 CICQ96RK0 1608 aaPredicted RBP14.13□□□□□ -0.15
LINC00649-217ENST00000616030 PHKG2P15735 406 aa14.13□□□□□ -0.15
LINC00649-217ENST00000616030 IFNL2Q8IZJ0 200 aa14.13□□□□□ -0.15
LINC00649-217ENST00000616030 HMGB2P26583 209 aaKnown RBP14.12□□□□□ -0.15
LINC00649-217ENST00000616030 PIAS4Q8N2W9 510 aaPredicted RBP14.12□□□□□ -0.15
LINC00649-217ENST00000616030 PALLDQ8WX93 1383 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
LINC00649-217ENST00000616030 MTHFSP49914 203 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 ZNF827Q17R98 1081 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 AMOTQ4VCS5 1084 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 SPON1Q9HCB6 807 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 MRC1P22897 1456 aa14.11□□□□□ -0.15
LINC00649-217ENST00000616030 SYTL4Q96C24 671 aaPredicted RBP14.1□□□□□ -0.15
LINC00649-217ENST00000616030 C4BP0C0L5 1744 aa14.1□□□□□ -0.15
LINC00649-217ENST00000616030 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
LINC00649-217ENST00000616030 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
LINC00649-217ENST00000616030 SMARCC1Q92922 1105 aaPredicted RBP14.09□□□□□ -0.15
LINC00649-217ENST00000616030 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
LINC00649-217ENST00000616030 PDGFDQ9GZP0 370 aaPredicted RBP14.09□□□□□ -0.15
LINC00649-217ENST00000616030 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 PTGER2P43116 358 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 PLEKHO1Q53GL0 409 aaPredicted RBP14.08□□□□□ -0.16
LINC00649-217ENST00000616030 AEBP1Q8IUX7 1158 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 PIGBQ92521 554 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 DCAF5Q96JK2 942 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 MTFR1LQ9H019 292 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 UBR3Q6ZT12 1888 aa14.08□□□□□ -0.16
LINC00649-217ENST00000616030 VIRMAQ69YN4 1812 aaKnown RBP14.07□□□□□ -0.16
LINC00649-217ENST00000616030 SULT6B1Q6IMI4 303 aa14.07□□□□□ -0.16
LINC00649-217ENST00000616030 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
LINC00649-217ENST00000616030 CCNL1Q9UK58 526 aaPredicted RBP14.07□□□□□ -0.16
LINC00649-217ENST00000616030 PNPLA7Q6ZV29 1317 aa14.07□□□□□ -0.16
LINC00649-217ENST00000616030 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
LINC00649-217ENST00000616030 COL5A3P25940 1745 aaPredicted RBP14.07□□□□□ -0.16
LINC00649-217ENST00000616030 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
LINC00649-217ENST00000616030 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
LINC00649-217ENST00000616030 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
LINC00649-217ENST00000616030 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
LINC00649-217ENST00000616030 AKAP4Q5JQC9 854 aa14.03□□□□□ -0.16
LINC00649-217ENST00000616030 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
LINC00649-217ENST00000616030 ZBTB7AO95365 584 aa14.02□□□□□ -0.17
LINC00649-217ENST00000616030 KCNQ4P56696 695 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms