RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FILIP1Q7Z7B0 1213 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 DHX29Q7Z478 1369 aaKnown RBP10.87□□□□□ -0.67
COL12A1-211ENST00000615798 STMN1P16949 149 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 RBBP5Q15291 538 aaKnown RBP10.87□□□□□ -0.67
COL12A1-211ENST00000615798 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 RNF8O76064 485 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 DBN1Q16643 649 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 MYCBPQ99417 103 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-211ENST00000615798 MCM2P49736 904 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 JAKMIP3Q5VZ66 844 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 A0A1B0GUL7 405 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 WDR63Q8IWG1 891 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 CBFA2T2O43439 604 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 GRIPAP1Q4V328 841 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-211ENST00000615798 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 RPUSD2Q8IZ73 545 aaKnown RBP10.86□□□□□ -0.67
COL12A1-211ENST00000615798 NSD2O96028 1365 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 RALGAPBQ86X10 1494 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 ZNF365Q70YC5 407 aa10.86□□□□□ -0.67
COL12A1-211ENST00000615798 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 GRIN2AQ12879 1464 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 KRT222Q8N1A0 295 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 GMNNO75496 209 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 GBP7Q8N8V2 638 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 LUC7L2Q9Y383 392 aaKnown RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 PRPF31Q8WWY3 499 aaKnown RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 RASSF4Q9H2L5 321 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 SATB2Q9UPW6 733 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 CCDC50Q8IVM0 306 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
COL12A1-211ENST00000615798 ABCC5O15440 1437 aa10.85□□□□□ -0.67
COL12A1-211ENST00000615798 FBF1Q8TES7 1133 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-211ENST00000615798 COG3Q96JB2 828 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 ANKS4BQ8N8V4 417 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-211ENST00000615798 SPC24Q8NBT2 197 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 RUFY2Q8WXA3 655 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
COL12A1-211ENST00000615798 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 LMAN1P49257 510 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 GRPEL1Q9HAV7 217 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 IFFO1Q0D2I5 559 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 WHAMMQ8TF30 809 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
COL12A1-211ENST00000615798 INTS3Q68E01 1043 aaKnown RBP10.83□□□□□ -0.68
COL12A1-211ENST00000615798 LMNTD2Q8IXW0 634 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 ZSCAN30Q86W11 494 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 SMARCC1Q92922 1105 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-211ENST00000615798 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 SLMAPQ14BN4 828 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 SAFBQ15424 915 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL12A1-211ENST00000615798 KIF18AQ8NI77 898 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 PDE1CQ14123 709 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-211ENST00000615798 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 CEP57Q86XR8 500 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 BACH2Q9BYV9 841 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 ATAD2Q6PL18 1390 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC43Q96MW1 224 aaKnown RBP10.83□□□□□ -0.68
COL12A1-211ENST00000615798 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-211ENST00000615798 PPFIA2O75334 1257 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 NEBLO76041 1014 aa10.83□□□□□ -0.68
COL12A1-211ENST00000615798 APAF1O14727 1248 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 WHAMMP3Q1A5X7 153 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 MYO10Q9HD67 2058 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 SLC52A1Q9NWF4 448 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 ABCC11Q96J66 1382 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 FAM135AQ9P2D6 1515 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 MIER3Q7Z3K6 550 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 PUS7Q96PZ0 661 aaKnown RBP10.82□□□□□ -0.68
COL12A1-211ENST00000615798 SDF4Q9BRK5 362 aa10.82□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC97Q96F63 343 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-211ENST00000615798 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
COL12A1-211ENST00000615798 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
COL12A1-211ENST00000615798 TAF4BQ92750 862 aa10.81□□□□□ -0.68
COL12A1-211ENST00000615798 CDK13Q14004 1512 aaKnown RBP10.81□□□□□ -0.68
COL12A1-211ENST00000615798 USP6NLQ92738 828 aa10.81□□□□□ -0.68
COL12A1-211ENST00000615798 CASQ1P31415 396 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 CPLX1O14810 134 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 NKTRP30414 1462 aaKnown RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 ZNF644Q9H582 1327 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC121Q6ZUS5 278 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 ZKSCAN1P17029 563 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 SMAP1Q8IYB5 467 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms