RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
FAM228B-210ENST00000615575 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
FAM228B-210ENST00000615575 MSL1Q68DK7 614 aa25.79■■□□□ 1.72
FAM228B-210ENST00000615575 TMC1Q8TDI8 760 aa25.79■■□□□ 1.72
FAM228B-210ENST00000615575 EDC4Q6P2E9 1401 aaKnown RBP25.79■■□□□ 1.72
FAM228B-210ENST00000615575 MEGF6O75095 1541 aa25.78■■□□□ 1.72
FAM228B-210ENST00000615575 A0A1W2PP64 1363 aa25.77■■□□□ 1.72
FAM228B-210ENST00000615575 SLC12A5Q9H2X9 1139 aa25.77■■□□□ 1.72
FAM228B-210ENST00000615575 MSH5O43196 834 aa25.76■■□□□ 1.71
FAM228B-210ENST00000615575 COL23A1Q86Y22 540 aaPredicted RBP25.76■■□□□ 1.71
FAM228B-210ENST00000615575 CCNL1Q9UK58 526 aaPredicted RBP25.76■■□□□ 1.71
FAM228B-210ENST00000615575 IP6K1Q92551 441 aa25.75■■□□□ 1.71
FAM228B-210ENST00000615575 HDGFL2Q7Z4V5 671 aaPredicted RBP25.74■■□□□ 1.71
FAM228B-210ENST00000615575 GRIN3BO60391 1043 aa25.73■■□□□ 1.71
FAM228B-210ENST00000615575 C5P01031 1676 aa25.73■■□□□ 1.71
FAM228B-210ENST00000615575 NEUROD1Q13562 356 aa25.7■■□□□ 1.71
FAM228B-210ENST00000615575 FBLN1P23142 703 aa25.69■■□□□ 1.7
FAM228B-210ENST00000615575 MAP3K19Q56UN5 1328 aa25.69■■□□□ 1.7
FAM228B-210ENST00000615575 ADCY9O60503 1353 aa25.68■■□□□ 1.7
FAM228B-210ENST00000615575 HOXC9P31274 260 aa25.68■■□□□ 1.7
FAM228B-210ENST00000615575 ZCRB1Q8TBF4 217 aaKnown RBP25.68■■□□□ 1.7
FAM228B-210ENST00000615575 ZNF526Q8TF50 670 aaPredicted RBP25.68■■□□□ 1.7
FAM228B-210ENST00000615575 USP47Q96K76 1375 aa25.67■■□□□ 1.7
FAM228B-210ENST00000615575 TAF1LQ8IZX4 1826 aa25.67■■□□□ 1.7
FAM228B-210ENST00000615575 GPBP1L1Q9HC44 474 aaPredicted RBP25.66■■□□□ 1.7
FAM228B-210ENST00000615575 TERF2IPQ9NYB0 399 aa25.65■■□□□ 1.7
FAM228B-210ENST00000615575 WWC3Q9ULE0 1092 aa25.65■■□□□ 1.7
FAM228B-210ENST00000615575 TOGARAM1Q9Y4F4 1720 aa25.65■■□□□ 1.7
FAM228B-210ENST00000615575 USHBP1Q8N6Y0 703 aa25.64■■□□□ 1.69
FAM228B-210ENST00000615575 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
FAM228B-210ENST00000615575 AMPHP49418 695 aa25.62■■□□□ 1.69
FAM228B-210ENST00000615575 HSPA6P17066 643 aa25.61■■□□□ 1.69
FAM228B-210ENST00000615575 AMIGO3Q86WK7 504 aa25.6■■□□□ 1.69
FAM228B-210ENST00000615575 CD2APQ9Y5K6 639 aa25.6■■□□□ 1.69
FAM228B-210ENST00000615575 COG3Q96JB2 828 aa25.59■■□□□ 1.69
FAM228B-210ENST00000615575 C4BP0C0L5 1744 aa25.59■■□□□ 1.69
FAM228B-210ENST00000615575 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
FAM228B-210ENST00000615575 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
FAM228B-210ENST00000615575 PALLDQ8WX93 1383 aa25.58■■□□□ 1.69
FAM228B-210ENST00000615575 SMIM5Q71RC9 77 aa25.57■■□□□ 1.68
FAM228B-210ENST00000615575 RRS1Q15050 365 aaKnown RBP25.56■■□□□ 1.68
FAM228B-210ENST00000615575 RTL1A6NKG5 1358 aa25.56■■□□□ 1.68
FAM228B-210ENST00000615575 UBR3Q6ZT12 1888 aa25.56■■□□□ 1.68
FAM228B-210ENST00000615575 IGSF1Q8N6C5 1336 aa25.55■■□□□ 1.68
FAM228B-210ENST00000615575 ITGB4P16144 1822 aa25.54■■□□□ 1.68
FAM228B-210ENST00000615575 PHF14O94880 888 aa25.52■■□□□ 1.68
FAM228B-210ENST00000615575 RAPGEF4Q8WZA2 1011 aa25.52■■□□□ 1.68
FAM228B-210ENST00000615575 MPRIPQ6WCQ1 1025 aa25.51■■□□□ 1.67
FAM228B-210ENST00000615575 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
FAM228B-210ENST00000615575 SMG6Q86US8 1419 aaKnown RBP25.5■■□□□ 1.67
FAM228B-210ENST00000615575 CGNL1Q0VF96 1302 aa25.49■■□□□ 1.67
FAM228B-210ENST00000615575 PCDH11XQ9BZA7 1347 aa25.49■■□□□ 1.67
FAM228B-210ENST00000615575 PCDH11YQ9BZA8 1340 aa25.49■■□□□ 1.67
FAM228B-210ENST00000615575 KIF3CO14782 793 aa25.49■■□□□ 1.67
FAM228B-210ENST00000615575 TATP17735 454 aaPredicted RBP25.49■■□□□ 1.67
FAM228B-210ENST00000615575 AK7Q96M32 723 aa25.49■■□□□ 1.67
FAM228B-210ENST00000615575 CICQ96RK0 1608 aaPredicted RBP25.49■■□□□ 1.67
FAM228B-210ENST00000615575 PUS7Q96PZ0 661 aaKnown RBP25.48■■□□□ 1.67
FAM228B-210ENST00000615575 TESK2Q96S53 571 aa25.47■■□□□ 1.67
FAM228B-210ENST00000615575 PKD1L3Q7Z443 1732 aa25.47■■□□□ 1.67
FAM228B-210ENST00000615575 MAP2P11137 1827 aaKnown RBP25.47■■□□□ 1.67
FAM228B-210ENST00000615575 CYP27B1O15528 508 aa25.46■■□□□ 1.67
FAM228B-210ENST00000615575 GGNBP2Q9H3C7 697 aa25.46■■□□□ 1.67
FAM228B-210ENST00000615575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.45■■□□□ 1.67
FAM228B-210ENST00000615575 HSP90AB2PQ58FF8 381 aa25.44■■□□□ 1.66
FAM228B-210ENST00000615575 KIAA1551Q9HCM1 1747 aa25.44■■□□□ 1.66
FAM228B-210ENST00000615575 KIF20BQ96Q89 1820 aa25.43■■□□□ 1.66
FAM228B-210ENST00000615575 INSRP06213 1382 aa25.42■■□□□ 1.66
FAM228B-210ENST00000615575 LINC00116Q8NCU8 138 aa25.42■■□□□ 1.66
FAM228B-210ENST00000615575 FYB1O15117 783 aa25.41■■□□□ 1.66
FAM228B-210ENST00000615575 NSD3Q9BZ95 1437 aa25.4■■□□□ 1.66
FAM228B-210ENST00000615575 N4BP2Q86UW6 1770 aaPredicted RBP25.4■■□□□ 1.66
FAM228B-210ENST00000615575 PXDNLA1KZ92 1463 aa25.4■■□□□ 1.66
FAM228B-210ENST00000615575 ST20-MTHFSA0A0A6YYL1 179 aa25.4■■□□□ 1.66
FAM228B-210ENST00000615575 PIGBQ92521 554 aa25.4■■□□□ 1.66
FAM228B-210ENST00000615575 SMARCC1Q92922 1105 aaPredicted RBP25.4■■□□□ 1.66
FAM228B-210ENST00000615575 FLT4P35916 1363 aa25.38■■□□□ 1.65
FAM228B-210ENST00000615575 SSFA2P28290 1259 aa25.38■■□□□ 1.65
FAM228B-210ENST00000615575 KIF13BQ9NQT8 1826 aa25.38■■□□□ 1.65
FAM228B-210ENST00000615575 LOC102724428A0A0B4J2F2 783 aa25.35■■□□□ 1.65
FAM228B-210ENST00000615575 SIK1P57059 783 aa25.35■■□□□ 1.65
FAM228B-210ENST00000615575 ITPK1Q13572 414 aa25.35■■□□□ 1.65
FAM228B-210ENST00000615575 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
FAM228B-210ENST00000615575 GNPATO15228 680 aa25.34■■□□□ 1.65
FAM228B-210ENST00000615575 MMP10P09238 476 aa25.33■■□□□ 1.65
FAM228B-210ENST00000615575 HMGB2P26583 209 aaKnown RBP25.33■■□□□ 1.65
FAM228B-210ENST00000615575 APLP1P51693 650 aa25.33■■□□□ 1.65
FAM228B-210ENST00000615575 NCAPD2Q15021 1401 aa25.33■■□□□ 1.65
FAM228B-210ENST00000615575 EMILIN1Q9Y6C2 1016 aa25.32■■□□□ 1.64
FAM228B-210ENST00000615575 WDR90Q96KV7 1748 aa25.32■■□□□ 1.64
FAM228B-210ENST00000615575 DNAJC5GQ8N7S2 189 aa25.31■■□□□ 1.64
FAM228B-210ENST00000615575 NMRK2Q9NPI5 230 aa25.31■■□□□ 1.64
FAM228B-210ENST00000615575 ASAP1Q9ULH1 1129 aa25.31■■□□□ 1.64
FAM228B-210ENST00000615575 BCS1LQ9Y276 419 aa25.31■■□□□ 1.64
FAM228B-210ENST00000615575 C10orf71Q711Q0 1435 aa25.3■■□□□ 1.64
FAM228B-210ENST00000615575 NKX1-1Q15270 411 aaPredicted RBP25.3■■□□□ 1.64
FAM228B-210ENST00000615575 ANKRD26Q9UPS8 1709 aa25.29■■□□□ 1.64
FAM228B-210ENST00000615575 KIF24Q5T7B8 1368 aa25.29■■□□□ 1.64
FAM228B-210ENST00000615575 BRCA1P38398 1863 aaKnown RBP25.28■■□□□ 1.64
FAM228B-210ENST00000615575 A0A0G2JLW4 131 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms