RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ZNF428Q96B54 188 aa24.39■■□□□ 1.5
MMP28-204ENST00000615136 BRPF1P55201 1214 aaPredicted RBP24.39■■□□□ 1.49
MMP28-204ENST00000615136 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.49
MMP28-204ENST00000615136 KRT28Q7Z3Y7 464 aa24.39■■□□□ 1.49
MMP28-204ENST00000615136 ITPRIPQ8IWB1 547 aa24.39■■□□□ 1.49
MMP28-204ENST00000615136 MST1RQ04912 1400 aa24.38■■□□□ 1.49
MMP28-204ENST00000615136 C8orf34Q49A92 452 aa24.38■■□□□ 1.49
MMP28-204ENST00000615136 DDX17Q92841 729 aaKnown RBP24.38■■□□□ 1.49
MMP28-204ENST00000615136 MIS18AQ9NYP9 233 aa24.38■■□□□ 1.49
MMP28-204ENST00000615136 RGS3P49796 1198 aa24.37■■□□□ 1.49
MMP28-204ENST00000615136 KIF1AQ12756 1690 aa24.36■■□□□ 1.49
MMP28-204ENST00000615136 GCP02774 474 aa24.36■■□□□ 1.49
MMP28-204ENST00000615136 RGPD2P0DJD1 1756 aa24.36■■□□□ 1.49
MMP28-204ENST00000615136 SLIT3O75094 1523 aa24.36■■□□□ 1.49
MMP28-204ENST00000615136 IPO8O15397 1037 aaKnown RBP24.35■■□□□ 1.49
MMP28-204ENST00000615136 KCNH5Q8NCM2 988 aa24.35■■□□□ 1.49
MMP28-204ENST00000615136 NBPF6Q5VWK0 638 aa24.35■■□□□ 1.49
MMP28-204ENST00000615136 NBPF4Q96M43 638 aa24.35■■□□□ 1.49
MMP28-204ENST00000615136 ATF3P18847 181 aa24.34■■□□□ 1.49
MMP28-204ENST00000615136 PHRF1Q9P1Y6 1649 aaKnown RBP24.34■■□□□ 1.49
MMP28-204ENST00000615136 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
MMP28-204ENST00000615136 DDX19BQ9UMR2 479 aa24.34■■□□□ 1.49
MMP28-204ENST00000615136 DDRGK1Q96HY6 314 aa24.33■■□□□ 1.49
MMP28-204ENST00000615136 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
MMP28-204ENST00000615136 MSH6P52701 1360 aa24.32■■□□□ 1.48
MMP28-204ENST00000615136 ARHGEF25Q86VW2 580 aa24.32■■□□□ 1.48
MMP28-204ENST00000615136 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
MMP28-204ENST00000615136 LRRC59Q96AG4 307 aaKnown RBP24.32■■□□□ 1.48
MMP28-204ENST00000615136 USP19O94966 1318 aa24.32■■□□□ 1.48
MMP28-204ENST00000615136 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
MMP28-204ENST00000615136 ALS2Q96Q42 1657 aa24.3■■□□□ 1.48
MMP28-204ENST00000615136 ZBTB40Q9NUA8 1239 aa24.3■■□□□ 1.48
MMP28-204ENST00000615136 LRRC37A3O60309 1634 aa24.3■■□□□ 1.48
MMP28-204ENST00000615136 XIRP1Q702N8 1843 aaKnown RBP24.29■■□□□ 1.48
MMP28-204ENST00000615136 DCCP43146 1447 aa24.29■■□□□ 1.48
MMP28-204ENST00000615136 ARHGAP45Q92619 1136 aa24.28■■□□□ 1.48
MMP28-204ENST00000615136 KIAA0232Q92628 1395 aa24.28■■□□□ 1.48
MMP28-204ENST00000615136 GNAT3A8MTJ3 354 aa24.28■■□□□ 1.48
MMP28-204ENST00000615136 IL17REQ8NFR9 667 aa24.28■■□□□ 1.48
MMP28-204ENST00000615136 AXIN2Q9Y2T1 843 aa24.28■■□□□ 1.48
MMP28-204ENST00000615136 MED1Q15648 1581 aaPredicted RBP24.28■■□□□ 1.48
MMP28-204ENST00000615136 TSPYL4Q9UJ04 414 aa24.27■■□□□ 1.48
MMP28-204ENST00000615136 RWDD1Q9H446 243 aaPredicted RBP24.27■■□□□ 1.48
MMP28-204ENST00000615136 NCOA3Q9Y6Q9 1424 aa24.26■■□□□ 1.47
MMP28-204ENST00000615136 ABCC4O15439 1325 aa24.26■■□□□ 1.47
MMP28-204ENST00000615136 MAP3K5Q99683 1374 aa24.26■■□□□ 1.47
MMP28-204ENST00000615136 HTATSF1O43719 755 aaKnown RBP24.25■■□□□ 1.47
MMP28-204ENST00000615136 NBR1Q14596 966 aa24.25■■□□□ 1.47
MMP28-204ENST00000615136 PDZRN3Q9UPQ7 1066 aa24.25■■□□□ 1.47
MMP28-204ENST00000615136 RGPD5Q99666 1765 aa24.24■■□□□ 1.47
MMP28-204ENST00000615136 ZBTB7BO15156 539 aaPredicted RBP24.23■■□□□ 1.47
MMP28-204ENST00000615136 ZC3H6P61129 1189 aaKnown RBP24.23■■□□□ 1.47
MMP28-204ENST00000615136 CADPS2Q86UW7 1296 aa24.23■■□□□ 1.47
MMP28-204ENST00000615136 ANKRD24Q8TF21 1146 aa24.22■■□□□ 1.47
MMP28-204ENST00000615136 RGS12O14924 1447 aa24.21■■□□□ 1.47
MMP28-204ENST00000615136 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
MMP28-204ENST00000615136 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
MMP28-204ENST00000615136 CABLES1Q8TDN4 633 aa24.2■■□□□ 1.46
MMP28-204ENST00000615136 C1orf115Q9H7X2 142 aa24.2■■□□□ 1.46
MMP28-204ENST00000615136 API5Q9BZZ5 524 aaKnown RBP24.18■■□□□ 1.46
MMP28-204ENST00000615136 LGR6Q9HBX8 967 aa24.18■■□□□ 1.46
MMP28-204ENST00000615136 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
MMP28-204ENST00000615136 PXDNQ92626 1479 aa24.18■■□□□ 1.46
MMP28-204ENST00000615136 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
MMP28-204ENST00000615136 SLC4A2P04920 1241 aa24.16■■□□□ 1.46
MMP28-204ENST00000615136 G2E3Q7L622 706 aa24.16■■□□□ 1.46
MMP28-204ENST00000615136 CAMTA1Q9Y6Y1 1673 aa24.16■■□□□ 1.46
MMP28-204ENST00000615136 CEMIPQ8WUJ3 1361 aa24.15■■□□□ 1.46
MMP28-204ENST00000615136 TAF7Q15545 349 aaPredicted RBP24.15■■□□□ 1.46
MMP28-204ENST00000615136 HAP1P54257 671 aaPredicted RBP24.14■■□□□ 1.45
MMP28-204ENST00000615136 BRINP3Q76B58 766 aa24.14■■□□□ 1.45
MMP28-204ENST00000615136 TNS3Q68CZ2 1445 aa24.14■■□□□ 1.45
MMP28-204ENST00000615136 ERBB3P21860 1342 aa24.14■■□□□ 1.45
MMP28-204ENST00000615136 RTL5Q5HYW3 569 aaPredicted RBP24.13■■□□□ 1.45
MMP28-204ENST00000615136 SMC5Q8IY18 1101 aa24.13■■□□□ 1.45
MMP28-204ENST00000615136 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
MMP28-204ENST00000615136 LMO7Q8WWI1 1683 aa24.13■■□□□ 1.45
MMP28-204ENST00000615136 COL18A1P39060 1754 aa24.12■■□□□ 1.45
MMP28-204ENST00000615136 SIRT2Q8IXJ6 389 aa24.11■■□□□ 1.45
MMP28-204ENST00000615136 NECTIN2Q92692 538 aa24.11■■□□□ 1.45
MMP28-204ENST00000615136 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
MMP28-204ENST00000615136 CRYBG1Q9Y4K1 1723 aa24.11■■□□□ 1.45
MMP28-204ENST00000615136 INTS3Q68E01 1043 aaKnown RBP24.11■■□□□ 1.45
MMP28-204ENST00000615136 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
MMP28-204ENST00000615136 FAM208AQ9UK61 1670 aaKnown RBP24.1■■□□□ 1.45
MMP28-204ENST00000615136 PLEKHO1Q53GL0 409 aaPredicted RBP24.1■■□□□ 1.45
MMP28-204ENST00000615136 CHRNA2Q15822 529 aa24.09■■□□□ 1.45
MMP28-204ENST00000615136 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
MMP28-204ENST00000615136 USP35Q9P2H5 1018 aa24.09■■□□□ 1.45
MMP28-204ENST00000615136 PTPRCP08575 1304 aa24.09■■□□□ 1.45
MMP28-204ENST00000615136 DEKP35659 375 aaKnown RBP24.08■■□□□ 1.45
MMP28-204ENST00000615136 F6X3S4 739 aa24.08■■□□□ 1.44
MMP28-204ENST00000615136 KCNQ3O43525 872 aa24.08■■□□□ 1.44
MMP28-204ENST00000615136 BABAM1Q9NWV8 329 aa24.06■■□□□ 1.44
MMP28-204ENST00000615136 AMOTQ4VCS5 1084 aa24.06■■□□□ 1.44
MMP28-204ENST00000615136 KDM3BQ7LBC6 1761 aa24.06■■□□□ 1.44
MMP28-204ENST00000615136 SEC24BO95487 1268 aa24.05■■□□□ 1.44
MMP28-204ENST00000615136 CHMP4BQ9H444 224 aaKnown RBP24.05■■□□□ 1.44
MMP28-204ENST00000615136 SLAIN2Q9P270 581 aa24.05■■□□□ 1.44
MMP28-204ENST00000615136 NLRP2Q9NX02 1062 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms