RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 FLT4P35916 1363 aa20.58■□□□□ 0.88
PRKN-211ENST00000615065 POLR3GLQ9BT43 218 aa20.57■□□□□ 0.88
PRKN-211ENST00000615065 MAP2P11137 1827 aaKnown RBP20.56■□□□□ 0.88
PRKN-211ENST00000615065 SLC15A2Q16348 729 aa20.56■□□□□ 0.88
PRKN-211ENST00000615065 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
PRKN-211ENST00000615065 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
PRKN-211ENST00000615065 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
PRKN-211ENST00000615065 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
PRKN-211ENST00000615065 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
PRKN-211ENST00000615065 HSPA5P11021 654 aaKnown RBP20.54■□□□□ 0.88
PRKN-211ENST00000615065 EIF4G2P78344 907 aaKnown RBP eCLIP20.53■□□□□ 0.88
PRKN-211ENST00000615065 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
PRKN-211ENST00000615065 LRRC4BQ9NT99 713 aa20.53■□□□□ 0.88
PRKN-211ENST00000615065 LY75O60449 1722 aa20.53■□□□□ 0.88
PRKN-211ENST00000615065 CGNL1Q0VF96 1302 aa20.53■□□□□ 0.88
PRKN-211ENST00000615065 NSD2O96028 1365 aa20.52■□□□□ 0.88
PRKN-211ENST00000615065 PRIM1P49642 420 aaKnown RBP20.52■□□□□ 0.88
PRKN-211ENST00000615065 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
PRKN-211ENST00000615065 ZNF827Q17R98 1081 aa20.5■□□□□ 0.87
PRKN-211ENST00000615065 TUBGCP6Q96RT7 1819 aa20.49■□□□□ 0.87
PRKN-211ENST00000615065 PPM1GO15355 546 aaPredicted RBP20.49■□□□□ 0.87
PRKN-211ENST00000615065 TATP17735 454 aaPredicted RBP20.49■□□□□ 0.87
PRKN-211ENST00000615065 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
PRKN-211ENST00000615065 PKD1L3Q7Z443 1732 aa20.49■□□□□ 0.87
PRKN-211ENST00000615065 QSER1Q2KHR3 1735 aa20.48■□□□□ 0.87
PRKN-211ENST00000615065 PTGER2P43116 358 aa20.48■□□□□ 0.87
PRKN-211ENST00000615065 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
PRKN-211ENST00000615065 TOGARAM1Q9Y4F4 1720 aa20.47■□□□□ 0.87
PRKN-211ENST00000615065 KCNQ4P56696 695 aa20.46■□□□□ 0.87
PRKN-211ENST00000615065 SLC27A3Q5K4L6 730 aa20.46■□□□□ 0.87
PRKN-211ENST00000615065 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
PRKN-211ENST00000615065 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
PRKN-211ENST00000615065 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
PRKN-211ENST00000615065 POLKQ9UBT6 870 aa20.45■□□□□ 0.86
PRKN-211ENST00000615065 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
PRKN-211ENST00000615065 ITGB4P16144 1822 aa20.44■□□□□ 0.86
PRKN-211ENST00000615065 TNNT2P45379 298 aaPredicted RBP20.44■□□□□ 0.86
PRKN-211ENST00000615065 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
PRKN-211ENST00000615065 PANK3Q9H999 370 aa20.44■□□□□ 0.86
PRKN-211ENST00000615065 CYP27B1O15528 508 aa20.42■□□□□ 0.86
PRKN-211ENST00000615065 SGIP1Q9BQI5 828 aa20.42■□□□□ 0.86
PRKN-211ENST00000615065 EYA1Q99502 592 aa20.41■□□□□ 0.86
PRKN-211ENST00000615065 C5P01031 1676 aa20.4■□□□□ 0.86
PRKN-211ENST00000615065 CCNL1Q9UK58 526 aaPredicted RBP20.4■□□□□ 0.86
PRKN-211ENST00000615065 PNPLA7Q6ZV29 1317 aa20.39■□□□□ 0.85
PRKN-211ENST00000615065 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
PRKN-211ENST00000615065 COL24A1Q17RW2 1714 aa20.39■□□□□ 0.85
PRKN-211ENST00000615065 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
PRKN-211ENST00000615065 FHDC1Q9C0D6 1143 aaPredicted RBP20.37■□□□□ 0.85
PRKN-211ENST00000615065 TFCP2L1Q9NZI6 479 aa20.37■□□□□ 0.85
PRKN-211ENST00000615065 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
PRKN-211ENST00000615065 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
PRKN-211ENST00000615065 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
PRKN-211ENST00000615065 ARXQ96QS3 562 aa20.35■□□□□ 0.85
PRKN-211ENST00000615065 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
PRKN-211ENST00000615065 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
PRKN-211ENST00000615065 NKX1-1Q15270 411 aaPredicted RBP20.34■□□□□ 0.85
PRKN-211ENST00000615065 SLC16A10Q8TF71 515 aa20.33■□□□□ 0.85
PRKN-211ENST00000615065 MORC1Q86VD1 984 aa20.32■□□□□ 0.84
PRKN-211ENST00000615065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.84
PRKN-211ENST00000615065 KIF7Q2M1P5 1343 aa20.31■□□□□ 0.84
PRKN-211ENST00000615065 IGSF1Q8N6C5 1336 aa20.31■□□□□ 0.84
PRKN-211ENST00000615065 YY1P25490 414 aa20.31■□□□□ 0.84
PRKN-211ENST00000615065 PIGBQ92521 554 aa20.31■□□□□ 0.84
PRKN-211ENST00000615065 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
PRKN-211ENST00000615065 PHKG2P15735 406 aa20.3■□□□□ 0.84
PRKN-211ENST00000615065 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
PRKN-211ENST00000615065 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
PRKN-211ENST00000615065 SMARCC1Q92922 1105 aaPredicted RBP20.29■□□□□ 0.84
PRKN-211ENST00000615065 COL23A1Q86Y22 540 aaPredicted RBP20.28■□□□□ 0.84
PRKN-211ENST00000615065 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
PRKN-211ENST00000615065 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
PRKN-211ENST00000615065 UBR3Q6ZT12 1888 aa20.27■□□□□ 0.84
PRKN-211ENST00000615065 MSH5O43196 834 aa20.27■□□□□ 0.84
PRKN-211ENST00000615065 POLD1P28340 1107 aa20.27■□□□□ 0.84
PRKN-211ENST00000615065 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
PRKN-211ENST00000615065 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
PRKN-211ENST00000615065 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
PRKN-211ENST00000615065 AEBP1Q8IUX7 1158 aa20.24■□□□□ 0.83
PRKN-211ENST00000615065 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
PRKN-211ENST00000615065 LOC102724428A0A0B4J2F2 783 aa20.23■□□□□ 0.83
PRKN-211ENST00000615065 SIK1P57059 783 aa20.23■□□□□ 0.83
PRKN-211ENST00000615065 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
PRKN-211ENST00000615065 CHD4Q14839 1912 aa20.22■□□□□ 0.83
PRKN-211ENST00000615065 HMGB2P26583 209 aaKnown RBP20.22■□□□□ 0.83
PRKN-211ENST00000615065 AMIGO3Q86WK7 504 aa20.22■□□□□ 0.83
PRKN-211ENST00000615065 UTRNP46939 3433 aa20.21■□□□□ 0.83
PRKN-211ENST00000615065 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
PRKN-211ENST00000615065 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
PRKN-211ENST00000615065 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
PRKN-211ENST00000615065 AK7Q96M32 723 aa20.21■□□□□ 0.83
PRKN-211ENST00000615065 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
PRKN-211ENST00000615065 SMIM5Q71RC9 77 aa20.2■□□□□ 0.82
PRKN-211ENST00000615065 FLAD1Q8NFF5 587 aa20.2■□□□□ 0.82
PRKN-211ENST00000615065 ATG3Q9NT62 314 aa20.2■□□□□ 0.82
PRKN-211ENST00000615065 PER1O15534 1290 aaPredicted RBP20.19■□□□□ 0.82
PRKN-211ENST00000615065 IL13P35225 146 aa20.19■□□□□ 0.82
PRKN-211ENST00000615065 ITPK1Q13572 414 aa20.19■□□□□ 0.82
PRKN-211ENST00000615065 SULT6B1Q6IMI4 303 aa20.19■□□□□ 0.82
PRKN-211ENST00000615065 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms