RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CCDC27Q2M243 656 aa17.58■□□□□ 0.41
SNPH-203ENST00000614659 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
SNPH-203ENST00000614659 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
SNPH-203ENST00000614659 SYCP2Q9BX26 1530 aa17.58■□□□□ 0.4
SNPH-203ENST00000614659 UHRF1BP1Q6BDS2 1440 aa17.57■□□□□ 0.4
SNPH-203ENST00000614659 CCDC158Q5M9N0 1113 aa17.57■□□□□ 0.4
SNPH-203ENST00000614659 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
SNPH-203ENST00000614659 TEX13AQ9BXU3 409 aaPredicted RBP17.57■□□□□ 0.4
SNPH-203ENST00000614659 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
SNPH-203ENST00000614659 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
SNPH-203ENST00000614659 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 ZPR1O75312 459 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 SAMD9Q5K651 1589 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 FOXO3O43524 673 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 MCM4P33991 863 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 HSP90AB3PQ58FF7 597 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 TEX35Q5T0J7 233 aa17.56■□□□□ 0.4
SNPH-203ENST00000614659 CAVIN1Q6NZI2 390 aaKnown RBP17.56■□□□□ 0.4
SNPH-203ENST00000614659 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNPH-203ENST00000614659 CCDC70Q6NSX1 233 aa17.55■□□□□ 0.4
SNPH-203ENST00000614659 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
SNPH-203ENST00000614659 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
SNPH-203ENST00000614659 ZNF396Q96N95 335 aaPredicted RBP17.55■□□□□ 0.4
SNPH-203ENST00000614659 INSRP06213 1382 aa17.55■□□□□ 0.4
SNPH-203ENST00000614659 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
SNPH-203ENST00000614659 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
SNPH-203ENST00000614659 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
SNPH-203ENST00000614659 PIK3C2GO75747 1445 aa17.54■□□□□ 0.4
SNPH-203ENST00000614659 ATP10AO60312 1499 aa17.54■□□□□ 0.4
SNPH-203ENST00000614659 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
SNPH-203ENST00000614659 PTPRCP08575 1304 aa17.53■□□□□ 0.4
SNPH-203ENST00000614659 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
SNPH-203ENST00000614659 ZSCAN25Q6NSZ9 544 aa17.53■□□□□ 0.4
SNPH-203ENST00000614659 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
SNPH-203ENST00000614659 XBP1P17861 261 aa17.53■□□□□ 0.4
SNPH-203ENST00000614659 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
SNPH-203ENST00000614659 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
SNPH-203ENST00000614659 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
SNPH-203ENST00000614659 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.4
SNPH-203ENST00000614659 BRMS1Q9HCU9 246 aa17.52■□□□□ 0.4
SNPH-203ENST00000614659 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.39
SNPH-203ENST00000614659 A0A087WZG4 1122 aa17.52■□□□□ 0.39
SNPH-203ENST00000614659 CCAR2Q8N163 923 aaKnown RBP17.52■□□□□ 0.39
SNPH-203ENST00000614659 GRPEL1Q9HAV7 217 aa17.52■□□□□ 0.39
SNPH-203ENST00000614659 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 C20orf194Q5TEA3 1177 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 PKNOX2Q96KN3 472 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
SNPH-203ENST00000614659 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
SNPH-203ENST00000614659 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 CCP110O43303 1012 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
SNPH-203ENST00000614659 CREBRFQ8IUR6 639 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 CFAP74Q9C0B2 1584 aa17.51■□□□□ 0.39
SNPH-203ENST00000614659 KRT32Q14532 448 aa17.5■□□□□ 0.39
SNPH-203ENST00000614659 NEO1Q92859 1461 aa17.5■□□□□ 0.39
SNPH-203ENST00000614659 C19orf44Q9H6X5 657 aa17.5■□□□□ 0.39
SNPH-203ENST00000614659 PZPP20742 1482 aa17.5■□□□□ 0.39
SNPH-203ENST00000614659 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
SNPH-203ENST00000614659 ARHGAP45Q92619 1136 aa17.49■□□□□ 0.39
SNPH-203ENST00000614659 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
SNPH-203ENST00000614659 KINO60870 393 aaKnown RBP17.48■□□□□ 0.39
SNPH-203ENST00000614659 COL17A1Q9UMD9 1497 aaPredicted RBP17.48■□□□□ 0.39
SNPH-203ENST00000614659 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
SNPH-203ENST00000614659 ARGLU1Q9NWB6 273 aaPredicted RBP17.48■□□□□ 0.39
SNPH-203ENST00000614659 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
SNPH-203ENST00000614659 WDHD1O75717 1129 aaPredicted RBP17.47■□□□□ 0.39
SNPH-203ENST00000614659 CCDC192P0DO97 292 aa17.47■□□□□ 0.39
SNPH-203ENST00000614659 HDAC1Q13547 482 aaPredicted RBP17.47■□□□□ 0.39
SNPH-203ENST00000614659 TMOD2Q9NZR1 351 aa17.47■□□□□ 0.39
SNPH-203ENST00000614659 CEP89Q96ST8 783 aa17.47■□□□□ 0.39
SNPH-203ENST00000614659 PES1O00541 588 aaKnown RBP17.47■□□□□ 0.39
SNPH-203ENST00000614659 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
SNPH-203ENST00000614659 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
SNPH-203ENST00000614659 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
SNPH-203ENST00000614659 LMTK3Q96Q04 1460 aa17.46■□□□□ 0.39
SNPH-203ENST00000614659 KRT85P78386 507 aa17.46■□□□□ 0.39
SNPH-203ENST00000614659 HOMER1Q86YM7 354 aa17.46■□□□□ 0.39
SNPH-203ENST00000614659 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
SNPH-203ENST00000614659 JMYQ8N9B5 988 aa17.46■□□□□ 0.39
SNPH-203ENST00000614659 DNAJC2Q99543 621 aaKnown RBP17.46■□□□□ 0.39
SNPH-203ENST00000614659 BMP2KLQ5H9B9 411 aa17.46■□□□□ 0.39
SNPH-203ENST00000614659 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 SDF4Q9BRK5 362 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
SNPH-203ENST00000614659 TRIM27P14373 513 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
SNPH-203ENST00000614659 MYL6BP14649 208 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 TRAPPC8Q9Y2L5 1435 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
SNPH-203ENST00000614659 MX1P20591 662 aa17.44■□□□□ 0.38
SNPH-203ENST00000614659 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
SNPH-203ENST00000614659 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
SNPH-203ENST00000614659 AK7Q96M32 723 aa17.44■□□□□ 0.38
SNPH-203ENST00000614659 LARP1Q6PKG0 1096 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms