RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 NSD2O96028 1365 aa18.26■□□□□ 0.51
PTPN20CP-201ENST00000614090 CAPN15O75808 1086 aa18.25■□□□□ 0.51
PTPN20CP-201ENST00000614090 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
PTPN20CP-201ENST00000614090 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
PTPN20CP-201ENST00000614090 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
PTPN20CP-201ENST00000614090 TOMM70O94826 608 aa18.24■□□□□ 0.51
PTPN20CP-201ENST00000614090 PRELPP51888 382 aa18.24■□□□□ 0.51
PTPN20CP-201ENST00000614090 ANKRD24Q8TF21 1146 aa18.23■□□□□ 0.51
PTPN20CP-201ENST00000614090 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
PTPN20CP-201ENST00000614090 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
PTPN20CP-201ENST00000614090 USP31Q70CQ4 1352 aa18.22■□□□□ 0.51
PTPN20CP-201ENST00000614090 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
PTPN20CP-201ENST00000614090 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
PTPN20CP-201ENST00000614090 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
PTPN20CP-201ENST00000614090 TNS4Q8IZW8 715 aa18.21■□□□□ 0.51
PTPN20CP-201ENST00000614090 JMYQ8N9B5 988 aa18.21■□□□□ 0.51
PTPN20CP-201ENST00000614090 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
PTPN20CP-201ENST00000614090 FLAD1Q8NFF5 587 aa18.2■□□□□ 0.5
PTPN20CP-201ENST00000614090 KLRG1Q96E93 195 aa18.2■□□□□ 0.5
PTPN20CP-201ENST00000614090 PCNTO95613 3336 aa18.19■□□□□ 0.5
PTPN20CP-201ENST00000614090 USP47Q96K76 1375 aa18.18■□□□□ 0.5
PTPN20CP-201ENST00000614090 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
PTPN20CP-201ENST00000614090 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
PTPN20CP-201ENST00000614090 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
PTPN20CP-201ENST00000614090 C4BP0C0L5 1744 aa18.16■□□□□ 0.5
PTPN20CP-201ENST00000614090 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
PTPN20CP-201ENST00000614090 KIF13BQ9NQT8 1826 aa18.16■□□□□ 0.5
PTPN20CP-201ENST00000614090 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.5
PTPN20CP-201ENST00000614090 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
PTPN20CP-201ENST00000614090 KIAA1551Q9HCM1 1747 aa18.13■□□□□ 0.49
PTPN20CP-201ENST00000614090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPN20CP-201ENST00000614090 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
PTPN20CP-201ENST00000614090 NME9Q86XW9 330 aa18.11■□□□□ 0.49
PTPN20CP-201ENST00000614090 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
PTPN20CP-201ENST00000614090 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
PTPN20CP-201ENST00000614090 MEGF6O75095 1541 aa18.1■□□□□ 0.49
PTPN20CP-201ENST00000614090 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
PTPN20CP-201ENST00000614090 HTRA3P83110 453 aa18.1■□□□□ 0.49
PTPN20CP-201ENST00000614090 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
PTPN20CP-201ENST00000614090 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
PTPN20CP-201ENST00000614090 FSTL1Q12841 308 aa18.09■□□□□ 0.49
PTPN20CP-201ENST00000614090 IP6K1Q92551 441 aa18.09■□□□□ 0.49
PTPN20CP-201ENST00000614090 BRCA1P38398 1863 aaKnown RBP18.09■□□□□ 0.49
PTPN20CP-201ENST00000614090 PXDNLA1KZ92 1463 aa18.08■□□□□ 0.49
PTPN20CP-201ENST00000614090 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
PTPN20CP-201ENST00000614090 CD163L1Q9NR16 1453 aa18.07■□□□□ 0.48
PTPN20CP-201ENST00000614090 ITGB4P16144 1822 aa18.07■□□□□ 0.48
PTPN20CP-201ENST00000614090 TNRC6CQ9HCJ0 1690 aaKnown RBP18.07■□□□□ 0.48
PTPN20CP-201ENST00000614090 SLC34A2O95436 690 aa18.07■□□□□ 0.48
PTPN20CP-201ENST00000614090 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
PTPN20CP-201ENST00000614090 ARFGEF1Q9Y6D6 1849 aa18.07■□□□□ 0.48
PTPN20CP-201ENST00000614090 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
PTPN20CP-201ENST00000614090 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
PTPN20CP-201ENST00000614090 AK7Q96M32 723 aa18.06■□□□□ 0.48
PTPN20CP-201ENST00000614090 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
PTPN20CP-201ENST00000614090 AMIGO3Q86WK7 504 aa18.05■□□□□ 0.48
PTPN20CP-201ENST00000614090 EDC4Q6P2E9 1401 aaKnown RBP18.05■□□□□ 0.48
PTPN20CP-201ENST00000614090 MAP2P11137 1827 aaKnown RBP18.04■□□□□ 0.48
PTPN20CP-201ENST00000614090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
PTPN20CP-201ENST00000614090 PHF14O94880 888 aa18.03■□□□□ 0.48
PTPN20CP-201ENST00000614090 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.48
PTPN20CP-201ENST00000614090 SSFA2P28290 1259 aa18.02■□□□□ 0.48
PTPN20CP-201ENST00000614090 BCS1LQ9Y276 419 aa18.01■□□□□ 0.47
PTPN20CP-201ENST00000614090 KCPQ6ZWJ8 1503 aa18■□□□□ 0.47
PTPN20CP-201ENST00000614090 HSPA1AP0DMV8 641 aaKnown RBP18■□□□□ 0.47
PTPN20CP-201ENST00000614090 HSPA1BP0DMV9 641 aaKnown RBP18■□□□□ 0.47
PTPN20CP-201ENST00000614090 TGFB2P61812 414 aa18■□□□□ 0.47
PTPN20CP-201ENST00000614090 ARHGAP27Q6ZUM4 889 aa18■□□□□ 0.47
PTPN20CP-201ENST00000614090 HDGFL2Q7Z4V5 671 aaPredicted RBP17.99■□□□□ 0.47
PTPN20CP-201ENST00000614090 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
PTPN20CP-201ENST00000614090 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
PTPN20CP-201ENST00000614090 HOXC9P31274 260 aa17.98■□□□□ 0.47
PTPN20CP-201ENST00000614090 SBF1O95248 1867 aa17.98■□□□□ 0.47
PTPN20CP-201ENST00000614090 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
PTPN20CP-201ENST00000614090 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
PTPN20CP-201ENST00000614090 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
PTPN20CP-201ENST00000614090 C9orf131Q5VYM1 1079 aa17.97■□□□□ 0.47
PTPN20CP-201ENST00000614090 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
PTPN20CP-201ENST00000614090 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
PTPN20CP-201ENST00000614090 MMP10P09238 476 aa17.96■□□□□ 0.47
PTPN20CP-201ENST00000614090 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
PTPN20CP-201ENST00000614090 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
PTPN20CP-201ENST00000614090 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
PTPN20CP-201ENST00000614090 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
PTPN20CP-201ENST00000614090 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
PTPN20CP-201ENST00000614090 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
PTPN20CP-201ENST00000614090 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
PTPN20CP-201ENST00000614090 FCHSD2O94868 740 aa17.94■□□□□ 0.46
PTPN20CP-201ENST00000614090 AMPHP49418 695 aa17.94■□□□□ 0.46
PTPN20CP-201ENST00000614090 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
PTPN20CP-201ENST00000614090 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
PTPN20CP-201ENST00000614090 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
PTPN20CP-201ENST00000614090 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
PTPN20CP-201ENST00000614090 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
PTPN20CP-201ENST00000614090 RRAGCQ9HB90 399 aa17.92■□□□□ 0.46
PTPN20CP-201ENST00000614090 TERF2IPQ9NYB0 399 aa17.92■□□□□ 0.46
PTPN20CP-201ENST00000614090 SMG6Q86US8 1419 aaKnown RBP17.91■□□□□ 0.46
PTPN20CP-201ENST00000614090 GNPATO15228 680 aa17.91■□□□□ 0.46
PTPN20CP-201ENST00000614090 DPEP1P16444 411 aa17.91■□□□□ 0.46
PTPN20CP-201ENST00000614090 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms