RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 RRP7AQ9Y3A4 280 aaKnown RBP20.57■□□□□ 0.88
CCL3-206ENST00000614051 MAPK8IP3Q9UPT6 1336 aa20.57■□□□□ 0.88
CCL3-206ENST00000614051 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
CCL3-206ENST00000614051 TCP11L2Q8N4U5 519 aa20.56■□□□□ 0.88
CCL3-206ENST00000614051 RBM6P78332 1123 aaKnown RBP20.56■□□□□ 0.88
CCL3-206ENST00000614051 USP21Q9UK80 565 aa20.56■□□□□ 0.88
CCL3-206ENST00000614051 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
CCL3-206ENST00000614051 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.55■□□□□ 0.88
CCL3-206ENST00000614051 NEUROD2Q15784 382 aa20.55■□□□□ 0.88
CCL3-206ENST00000614051 MEGF6O75095 1541 aa20.55■□□□□ 0.88
CCL3-206ENST00000614051 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCL3-206ENST00000614051 CCDC9Q9Y3X0 531 aaKnown RBP20.53■□□□□ 0.88
CCL3-206ENST00000614051 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
CCL3-206ENST00000614051 NEFMP07197 916 aa20.52■□□□□ 0.88
CCL3-206ENST00000614051 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
CCL3-206ENST00000614051 PARP4Q9UKK3 1724 aaKnown RBP20.52■□□□□ 0.87
CCL3-206ENST00000614051 TMPOP42166 694 aaKnown RBP20.51■□□□□ 0.87
CCL3-206ENST00000614051 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
CCL3-206ENST00000614051 SPATA31A1Q5TZJ5 1347 aa20.51■□□□□ 0.87
CCL3-206ENST00000614051 SPATA31A5Q5VU36 1347 aa20.51■□□□□ 0.87
CCL3-206ENST00000614051 SPATA31A7Q8IWB4 1347 aa20.51■□□□□ 0.87
CCL3-206ENST00000614051 TATP17735 454 aaPredicted RBP20.5■□□□□ 0.87
CCL3-206ENST00000614051 VPS72Q15906 364 aa20.5■□□□□ 0.87
CCL3-206ENST00000614051 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
CCL3-206ENST00000614051 RIPK4P57078 832 aa20.49■□□□□ 0.87
CCL3-206ENST00000614051 IL2RBP14784 551 aa20.48■□□□□ 0.87
CCL3-206ENST00000614051 PKD1L3Q7Z443 1732 aa20.48■□□□□ 0.87
CCL3-206ENST00000614051 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
CCL3-206ENST00000614051 TRPC5Q9UL62 973 aaPredicted RBP20.47■□□□□ 0.87
CCL3-206ENST00000614051 OVOS2A0A0G2JMS6 1433 aa20.46■□□□□ 0.87
CCL3-206ENST00000614051 DISP2A7MBM2 1401 aa20.46■□□□□ 0.87
CCL3-206ENST00000614051 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
CCL3-206ENST00000614051 SHANK3Q9BYB0 1731 aa20.46■□□□□ 0.87
CCL3-206ENST00000614051 ATRNO75882 1429 aa20.46■□□□□ 0.87
CCL3-206ENST00000614051 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
CCL3-206ENST00000614051 GLI3P10071 1580 aa20.45■□□□□ 0.86
CCL3-206ENST00000614051 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
CCL3-206ENST00000614051 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
CCL3-206ENST00000614051 VIRMAQ69YN4 1812 aaKnown RBP20.44■□□□□ 0.86
CCL3-206ENST00000614051 AMOTQ4VCS5 1084 aa20.43■□□□□ 0.86
CCL3-206ENST00000614051 THRAP3Q9Y2W1 955 aaKnown RBP20.43■□□□□ 0.86
CCL3-206ENST00000614051 DCTN1Q14203 1278 aa20.43■□□□□ 0.86
CCL3-206ENST00000614051 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
CCL3-206ENST00000614051 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
CCL3-206ENST00000614051 ZCRB1Q8TBF4 217 aaKnown RBP20.43■□□□□ 0.86
CCL3-206ENST00000614051 SPG7Q9UQ90 795 aa20.43■□□□□ 0.86
CCL3-206ENST00000614051 GJD4Q96KN9 370 aaPredicted RBP20.42■□□□□ 0.86
CCL3-206ENST00000614051 THUMPD2Q9BTF0 503 aaKnown RBP20.42■□□□□ 0.86
CCL3-206ENST00000614051 ZNF521Q96K83 1311 aa20.41■□□□□ 0.86
CCL3-206ENST00000614051 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
CCL3-206ENST00000614051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCL3-206ENST00000614051 LRRC37A3O60309 1634 aa20.4■□□□□ 0.86
CCL3-206ENST00000614051 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
CCL3-206ENST00000614051 CCDC27Q2M243 656 aa20.4■□□□□ 0.86
CCL3-206ENST00000614051 MAP3K5Q99683 1374 aa20.4■□□□□ 0.86
CCL3-206ENST00000614051 CYP27B1O15528 508 aa20.39■□□□□ 0.85
CCL3-206ENST00000614051 MCM10Q7L590 875 aa20.39■□□□□ 0.85
CCL3-206ENST00000614051 NGEFQ8N5V2 710 aa20.39■□□□□ 0.85
CCL3-206ENST00000614051 PLEKHG2Q9H7P9 1386 aa20.38■□□□□ 0.85
CCL3-206ENST00000614051 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
CCL3-206ENST00000614051 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
CCL3-206ENST00000614051 DDX54Q8TDD1 881 aaKnown RBP20.38■□□□□ 0.85
CCL3-206ENST00000614051 RGS12O14924 1447 aa20.38■□□□□ 0.85
CCL3-206ENST00000614051 PHKG2P15735 406 aa20.37■□□□□ 0.85
CCL3-206ENST00000614051 MPRIPQ6WCQ1 1025 aa20.37■□□□□ 0.85
CCL3-206ENST00000614051 CDCA7LQ96GN5 454 aa20.37■□□□□ 0.85
CCL3-206ENST00000614051 CDCA7Q9BWT1 371 aaPredicted RBP20.37■□□□□ 0.85
CCL3-206ENST00000614051 THSD7AQ9UPZ6 1657 aa20.37■□□□□ 0.85
CCL3-206ENST00000614051 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
CCL3-206ENST00000614051 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
CCL3-206ENST00000614051 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
CCL3-206ENST00000614051 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
CCL3-206ENST00000614051 EXOC5O00471 708 aa20.36■□□□□ 0.85
CCL3-206ENST00000614051 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
CCL3-206ENST00000614051 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
CCL3-206ENST00000614051 RTF1Q92541 710 aaKnown RBP20.36■□□□□ 0.85
CCL3-206ENST00000614051 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
CCL3-206ENST00000614051 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
CCL3-206ENST00000614051 SCN11AQ9UI33 1791 aa20.35■□□□□ 0.85
CCL3-206ENST00000614051 A0A0G2JS52 829 aa20.35■□□□□ 0.85
CCL3-206ENST00000614051 MYT1Q01538 1121 aa20.35■□□□□ 0.85
CCL3-206ENST00000614051 DDB1Q16531 1140 aa20.35■□□□□ 0.85
CCL3-206ENST00000614051 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
CCL3-206ENST00000614051 KDM6AO15550 1401 aaPredicted RBP20.33■□□□□ 0.85
CCL3-206ENST00000614051 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
CCL3-206ENST00000614051 GOLGA2Q08379 1002 aa20.33■□□□□ 0.85
CCL3-206ENST00000614051 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
CCL3-206ENST00000614051 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
CCL3-206ENST00000614051 CCDC125Q86Z20 511 aa20.31■□□□□ 0.84
CCL3-206ENST00000614051 ONECUT3O60422 494 aaPredicted RBP20.3■□□□□ 0.84
CCL3-206ENST00000614051 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
CCL3-206ENST00000614051 TOGARAM1Q9Y4F4 1720 aa20.3■□□□□ 0.84
CCL3-206ENST00000614051 BRWD3Q6RI45 1802 aa20.3■□□□□ 0.84
CCL3-206ENST00000614051 CEMIPQ8WUJ3 1361 aa20.3■□□□□ 0.84
CCL3-206ENST00000614051 SLFN5Q08AF3 891 aa20.3■□□□□ 0.84
CCL3-206ENST00000614051 PDE3BQ13370 1112 aa20.3■□□□□ 0.84
CCL3-206ENST00000614051 SEPT12Q8IYM1 358 aa20.3■□□□□ 0.84
CCL3-206ENST00000614051 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
CCL3-206ENST00000614051 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
CCL3-206ENST00000614051 NKX1-1Q15270 411 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms