RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 NUTM2BA6NNL0 878 aaPredicted RBP11.9□□□□□ -0.5
CCL3-205ENST00000613928 NUTM2EB1AL46 878 aaPredicted RBP11.9□□□□□ -0.5
CCL3-205ENST00000613928 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
CCL3-205ENST00000613928 TMEM259Q4ZIN3 620 aa11.9□□□□□ -0.5
CCL3-205ENST00000613928 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
CCL3-205ENST00000613928 NUTM2AQ8IVF1 878 aaPredicted RBP11.9□□□□□ -0.5
CCL3-205ENST00000613928 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
CCL3-205ENST00000613928 HLA-CQ95604 372 aa11.9□□□□□ -0.5
CCL3-205ENST00000613928 ABCA6Q8N139 1617 aa11.89□□□□□ -0.51
CCL3-205ENST00000613928 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
CCL3-205ENST00000613928 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
CCL3-205ENST00000613928 A2MP01023 1474 aa11.89□□□□□ -0.51
CCL3-205ENST00000613928 PTPRTO14522 1441 aa11.89□□□□□ -0.51
CCL3-205ENST00000613928 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
CCL3-205ENST00000613928 PCDHGC3Q9UN70 934 aa11.89□□□□□ -0.51
CCL3-205ENST00000613928 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
CCL3-205ENST00000613928 KIF3BO15066 747 aa11.88□□□□□ -0.51
CCL3-205ENST00000613928 APLP1P51693 650 aa11.88□□□□□ -0.51
CCL3-205ENST00000613928 MTMR2Q13614 643 aa11.88□□□□□ -0.51
CCL3-205ENST00000613928 MORN1Q5T089 497 aa11.88□□□□□ -0.51
CCL3-205ENST00000613928 BANK1Q8NDB2 785 aa11.88□□□□□ -0.51
CCL3-205ENST00000613928 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
CCL3-205ENST00000613928 Q3C1V9 767 aa11.87□□□□□ -0.51
CCL3-205ENST00000613928 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
CCL3-205ENST00000613928 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
CCL3-205ENST00000613928 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
CCL3-205ENST00000613928 E9PCH4 1651 aa11.87□□□□□ -0.51
CCL3-205ENST00000613928 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
CCL3-205ENST00000613928 MCM6Q14566 821 aa11.86□□□□□ -0.51
CCL3-205ENST00000613928 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
CCL3-205ENST00000613928 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
CCL3-205ENST00000613928 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
CCL3-205ENST00000613928 TET3O43151 1660 aa11.85□□□□□ -0.51
CCL3-205ENST00000613928 REREQ9P2R6 1566 aa11.85□□□□□ -0.51
CCL3-205ENST00000613928 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
CCL3-205ENST00000613928 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
CCL3-205ENST00000613928 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
CCL3-205ENST00000613928 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
CCL3-205ENST00000613928 IQSEC2Q5JU85 1478 aa11.84□□□□□ -0.51
CCL3-205ENST00000613928 KANK1Q14678 1352 aa11.84□□□□□ -0.51
CCL3-205ENST00000613928 HSPA5P11021 654 aaKnown RBP11.84□□□□□ -0.51
CCL3-205ENST00000613928 SLC27A5Q9Y2P5 690 aa11.84□□□□□ -0.51
CCL3-205ENST00000613928 CAMSAP1Q5T5Y3 1602 aa11.83□□□□□ -0.52
CCL3-205ENST00000613928 NR1I2O75469 434 aa11.83□□□□□ -0.52
CCL3-205ENST00000613928 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.52
CCL3-205ENST00000613928 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
CCL3-205ENST00000613928 LMTK2Q8IWU2 1503 aa11.82□□□□□ -0.52
CCL3-205ENST00000613928 AP1G2O75843 785 aa11.81□□□□□ -0.52
CCL3-205ENST00000613928 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCL3-205ENST00000613928 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
CCL3-205ENST00000613928 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
CCL3-205ENST00000613928 TRPM2O94759 1503 aa11.81□□□□□ -0.52
CCL3-205ENST00000613928 AGLP35573 1532 aa11.81□□□□□ -0.52
CCL3-205ENST00000613928 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
CCL3-205ENST00000613928 RETREG3Q86VR2 466 aa11.8□□□□□ -0.52
CCL3-205ENST00000613928 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
CCL3-205ENST00000613928 EFCAB6Q5THR3 1501 aa11.8□□□□□ -0.52
CCL3-205ENST00000613928 CEP152O94986 1710 aa11.8□□□□□ -0.52
CCL3-205ENST00000613928 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
CCL3-205ENST00000613928 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
CCL3-205ENST00000613928 RALGAPBQ86X10 1494 aa11.79□□□□□ -0.52
CCL3-205ENST00000613928 UBAP1LF5GYI3 381 aa11.79□□□□□ -0.52
CCL3-205ENST00000613928 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
CCL3-205ENST00000613928 ZMYND15Q9H091 742 aa11.79□□□□□ -0.52
CCL3-205ENST00000613928 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
CCL3-205ENST00000613928 CLTCL1P53675 1640 aa11.78□□□□□ -0.52
CCL3-205ENST00000613928 APBB1O00213 710 aa11.78□□□□□ -0.52
CCL3-205ENST00000613928 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
CCL3-205ENST00000613928 BLOC1S3Q6QNY0 202 aa11.78□□□□□ -0.52
CCL3-205ENST00000613928 SCUBE3Q8IX30 993 aa11.78□□□□□ -0.52
CCL3-205ENST00000613928 MYO3AQ8NEV4 1616 aa11.78□□□□□ -0.52
CCL3-205ENST00000613928 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.52
CCL3-205ENST00000613928 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
CCL3-205ENST00000613928 PTPN5P54829 565 aa11.77□□□□□ -0.53
CCL3-205ENST00000613928 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
CCL3-205ENST00000613928 GGT6Q6P531 493 aa11.77□□□□□ -0.53
CCL3-205ENST00000613928 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
CCL3-205ENST00000613928 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
CCL3-205ENST00000613928 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
CCL3-205ENST00000613928 CLTCQ00610 1675 aaKnown RBP11.77□□□□□ -0.53
CCL3-205ENST00000613928 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
CCL3-205ENST00000613928 ABCC3O15438 1527 aa11.76□□□□□ -0.53
CCL3-205ENST00000613928 CFAP99D6REC4 459 aa11.76□□□□□ -0.53
CCL3-205ENST00000613928 USP17L8P0C7I0 530 aa11.76□□□□□ -0.53
CCL3-205ENST00000613928 TSC1Q92574 1164 aa11.76□□□□□ -0.53
CCL3-205ENST00000613928 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
CCL3-205ENST00000613928 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
CCL3-205ENST00000613928 BRICD5Q6PL45 260 aa11.75□□□□□ -0.53
CCL3-205ENST00000613928 RNF19BQ6ZMZ0 732 aa11.75□□□□□ -0.53
CCL3-205ENST00000613928 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
CCL3-205ENST00000613928 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
CCL3-205ENST00000613928 NPATQ14207 1427 aa11.75□□□□□ -0.53
CCL3-205ENST00000613928 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
CCL3-205ENST00000613928 DESI1Q6ICB0 168 aa11.74□□□□□ -0.53
CCL3-205ENST00000613928 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
CCL3-205ENST00000613928 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
CCL3-205ENST00000613928 RAD21O60216 631 aa11.73□□□□□ -0.53
CCL3-205ENST00000613928 COPS2P61201 443 aa11.73□□□□□ -0.53
CCL3-205ENST00000613928 MTMR14Q8NCE2 650 aa11.73□□□□□ -0.53
CCL3-205ENST00000613928 THAP11Q96EK4 314 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms