RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 CCDC96Q2M329 555 aa7.04□□□□□ -1.28
CCL16-206ENST00000613642 BARGINQ6ZT62 677 aa7.04□□□□□ -1.28
CCL16-206ENST00000613642 FEZ2Q9UHY8 353 aaPredicted RBP7.04□□□□□ -1.28
CCL16-206ENST00000613642 MOXD2PA6NHM9 499 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 ANP32CO43423 234 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 SATB1Q01826 763 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 MAP2K1Q02750 393 aaPredicted RBP7.03□□□□□ -1.28
CCL16-206ENST00000613642 AMHR2Q16671 573 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 TSPYL1Q9H0U9 437 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 UNC93B1Q9H1C4 597 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 MYH16Q9H6N6 1097 aa7.03□□□□□ -1.28
CCL16-206ENST00000613642 ARID4AP29374 1257 aaPredicted RBP7.02□□□□□ -1.29
CCL16-206ENST00000613642 KCNH2Q12809 1159 aa7.02□□□□□ -1.29
CCL16-206ENST00000613642 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
CCL16-206ENST00000613642 DESI1Q6ICB0 168 aa7.02□□□□□ -1.29
CCL16-206ENST00000613642 SGSM3Q96HU1 749 aa7.02□□□□□ -1.29
CCL16-206ENST00000613642 TSPAN18Q96SJ8 248 aa7.02□□□□□ -1.29
CCL16-206ENST00000613642 C1orf115Q9H7X2 142 aa7.02□□□□□ -1.29
CCL16-206ENST00000613642 ZCCHC6Q5VYS8 1495 aaKnown RBP7.01□□□□□ -1.29
CCL16-206ENST00000613642 SPDYE5A6NIY4 337 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 VGLL3A8MV65 326 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 CAPN5O15484 640 aaPredicted RBP7.01□□□□□ -1.29
CCL16-206ENST00000613642 ZMYND10O75800 440 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 TERF1P54274 439 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 NOL8Q76FK4 1167 aaKnown RBP7.01□□□□□ -1.29
CCL16-206ENST00000613642 SDR16C5Q8N3Y7 309 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 MPNDQ8N594 471 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 PRR7Q8TB68 274 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 NUB1Q9Y5A7 615 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 WASF2Q9Y6W5 498 aa7.01□□□□□ -1.29
CCL16-206ENST00000613642 GJA5P36382 358 aa7□□□□□ -1.29
CCL16-206ENST00000613642 MFAP1P55081 439 aaKnown RBP7□□□□□ -1.29
CCL16-206ENST00000613642 BRPF1P55201 1214 aaPredicted RBP7□□□□□ -1.29
CCL16-206ENST00000613642 MTMR2Q13614 643 aa7□□□□□ -1.29
CCL16-206ENST00000613642 BAP1Q92560 729 aa7□□□□□ -1.29
CCL16-206ENST00000613642 NXF1Q9UBU9 619 aaKnown RBP7□□□□□ -1.29
CCL16-206ENST00000613642 ZNF500O60304 480 aaPredicted RBP6.99□□□□□ -1.29
CCL16-206ENST00000613642 BMP1P13497 986 aa6.99□□□□□ -1.29
CCL16-206ENST00000613642 VARSP26640 1264 aaKnown RBP6.99□□□□□ -1.29
CCL16-206ENST00000613642 GIGYF2Q6Y7W6 1299 aaKnown RBP6.99□□□□□ -1.29
CCL16-206ENST00000613642 NPAS3Q8IXF0 933 aa6.99□□□□□ -1.29
CCL16-206ENST00000613642 MSL3Q8N5Y2 521 aaKnown RBP6.99□□□□□ -1.29
CCL16-206ENST00000613642 IPO9Q96P70 1041 aaKnown RBP6.99□□□□□ -1.29
CCL16-206ENST00000613642 MTA1Q13330 715 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 TTLL12Q14166 644 aaPredicted RBP6.98□□□□□ -1.29
CCL16-206ENST00000613642 FOXD4L6Q3SYB3 417 aaPredicted RBP6.98□□□□□ -1.29
CCL16-206ENST00000613642 LINC01559Q495D7 138 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 GORABQ5T7V8 394 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 FOXD4L3Q6VB84 417 aaPredicted RBP6.98□□□□□ -1.29
CCL16-206ENST00000613642 ANKRD13AQ8IZ07 590 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 ZNF511Q8NB15 262 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 BANK1Q8NDB2 785 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 SLC16A10Q8TF71 515 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
CCL16-206ENST00000613642 PLEKHG3A1L390 1219 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 LMOD3Q0VAK6 560 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 LYPD8Q6UX82 237 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 ANKRD23Q86SG2 305 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 BEGAINQ9BUH8 593 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 TLL2Q9Y6L7 1015 aa6.97□□□□□ -1.29
CCL16-206ENST00000613642 NACADO15069 1562 aa6.96□□□□□ -1.29
CCL16-206ENST00000613642 ZRANB2O95218 330 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCL16-206ENST00000613642 RSBN1LQ6PCB5 846 aaPredicted RBP6.96□□□□□ -1.3
CCL16-206ENST00000613642 ZC3H15Q8WU90 426 aaKnown RBP6.96□□□□□ -1.3
CCL16-206ENST00000613642 ZFP42Q96MM3 310 aa6.96□□□□□ -1.3
CCL16-206ENST00000613642 FAM210AQ96ND0 272 aa6.96□□□□□ -1.3
CCL16-206ENST00000613642 PAIP2Q9BPZ3 127 aaKnown RBP6.96□□□□□ -1.3
CCL16-206ENST00000613642 TBC1D2Q9BYX2 928 aa6.96□□□□□ -1.3
CCL16-206ENST00000613642 EFCC1Q9HA90 598 aa6.96□□□□□ -1.3
CCL16-206ENST00000613642 TPD52L2O43399 206 aaKnown RBP6.95□□□□□ -1.3
CCL16-206ENST00000613642 LORP23490 312 aaPredicted RBP6.95□□□□□ -1.3
CCL16-206ENST00000613642 NNTQ13423 1086 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 L1TD1Q5T7N2 865 aaKnown RBP6.95□□□□□ -1.3
CCL16-206ENST00000613642 ARMCX6Q7L4S7 300 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 NME8Q8N427 588 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 MTA3Q9BTC8 594 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 TRAIPQ9BWF2 469 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
CCL16-206ENST00000613642 ZHX1Q9UKY1 873 aaPredicted RBP6.95□□□□□ -1.3
CCL16-206ENST00000613642 PCDHB15Q9Y5E8 787 aa6.95□□□□□ -1.3
CCL16-206ENST00000613642 H3BM21 787 aa6.94□□□□□ -1.3
CCL16-206ENST00000613642 SPTLC1O15269 473 aa6.94□□□□□ -1.3
CCL16-206ENST00000613642 AEBP1Q8IUX7 1158 aa6.94□□□□□ -1.3
CCL16-206ENST00000613642 IGF1RP08069 1367 aa6.94□□□□□ -1.3
CCL16-206ENST00000613642 CFAP99D6REC4 459 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 BRD1O95696 1058 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
CCL16-206ENST00000613642 TIMP2P16035 220 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 GMPRP36959 345 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 WDR78Q5VTH9 848 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 MRPL14Q6P1L8 145 aaKnown RBP6.93□□□□□ -1.3
CCL16-206ENST00000613642 PARP9Q8IXQ6 854 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 SNRNP27Q8WVK2 155 aaKnown RBP6.93□□□□□ -1.3
CCL16-206ENST00000613642 IRF7Q92985 503 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 CDK15Q96Q40 435 aa6.93□□□□□ -1.3
CCL16-206ENST00000613642 CEP83Q9Y592 693 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms