RNA–Protein interactions for RNA: ENST00000612603.1

LINC00272-202, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best)

Gene LINC00272, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-202ENST00000612603 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
LINC00272-202ENST00000612603 APBA3O96018 575 aa16.02■□□□□ 0.16
LINC00272-202ENST00000612603 BAG6P46379 1132 aa16.02■□□□□ 0.16
LINC00272-202ENST00000612603 CCDC125Q86Z20 511 aa16.02■□□□□ 0.16
LINC00272-202ENST00000612603 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
LINC00272-202ENST00000612603 HMOX1P09601 288 aa16.01■□□□□ 0.15
LINC00272-202ENST00000612603 PPP2R1AP30153 589 aa16.01■□□□□ 0.15
LINC00272-202ENST00000612603 SULT6B1Q6IMI4 303 aa16.01■□□□□ 0.15
LINC00272-202ENST00000612603 AEBP1Q8IUX7 1158 aa16.01■□□□□ 0.15
LINC00272-202ENST00000612603 SYTL4Q96C24 671 aaPredicted RBP16.01■□□□□ 0.15
LINC00272-202ENST00000612603 IGSF1Q8N6C5 1336 aa16■□□□□ 0.15
LINC00272-202ENST00000612603 DOT1LQ8TEK3 1739 aa16■□□□□ 0.15
LINC00272-202ENST00000612603 IL13P35225 146 aa16■□□□□ 0.15
LINC00272-202ENST00000612603 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
LINC00272-202ENST00000612603 PTF1AQ7RTS3 328 aa15.99■□□□□ 0.15
LINC00272-202ENST00000612603 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
LINC00272-202ENST00000612603 PCDH11XQ9BZA7 1347 aa15.98■□□□□ 0.15
LINC00272-202ENST00000612603 PCDH11YQ9BZA8 1340 aa15.98■□□□□ 0.15
LINC00272-202ENST00000612603 KCNQ2O43526 872 aa15.98■□□□□ 0.15
LINC00272-202ENST00000612603 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
LINC00272-202ENST00000612603 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
LINC00272-202ENST00000612603 PARD3Q8TEW0 1356 aa15.97■□□□□ 0.15
LINC00272-202ENST00000612603 NCAPD2Q15021 1401 aa15.96■□□□□ 0.15
LINC00272-202ENST00000612603 EZH2Q15910 746 aaKnown RBP15.96■□□□□ 0.15
LINC00272-202ENST00000612603 COL3A1P02461 1466 aaPredicted RBP15.96■□□□□ 0.14
LINC00272-202ENST00000612603 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
LINC00272-202ENST00000612603 BTAF1O14981 1849 aa15.95■□□□□ 0.14
LINC00272-202ENST00000612603 CYP27B1O15528 508 aa15.94■□□□□ 0.14
LINC00272-202ENST00000612603 RALBP1Q15311 655 aa15.94■□□□□ 0.14
LINC00272-202ENST00000612603 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
LINC00272-202ENST00000612603 ZNF530Q6P9A1 599 aaPredicted RBP15.94■□□□□ 0.14
LINC00272-202ENST00000612603 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
LINC00272-202ENST00000612603 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
LINC00272-202ENST00000612603 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
LINC00272-202ENST00000612603 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
LINC00272-202ENST00000612603 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
LINC00272-202ENST00000612603 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
LINC00272-202ENST00000612603 IFNL2Q8IZJ0 200 aa15.91■□□□□ 0.14
LINC00272-202ENST00000612603 BCL9O00512 1426 aa15.91■□□□□ 0.14
LINC00272-202ENST00000612603 ITGB4P16144 1822 aa15.91■□□□□ 0.14
LINC00272-202ENST00000612603 MYBBP1AQ9BQG0 1328 aaKnown RBP15.91■□□□□ 0.14
LINC00272-202ENST00000612603 PHKG2P15735 406 aa15.9■□□□□ 0.14
LINC00272-202ENST00000612603 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
LINC00272-202ENST00000612603 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
LINC00272-202ENST00000612603 KDRP35968 1356 aa15.89■□□□□ 0.13
LINC00272-202ENST00000612603 CAMKK2Q96RR4 588 aa15.89■□□□□ 0.13
LINC00272-202ENST00000612603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00272-202ENST00000612603 PRKAR2BP31323 418 aa15.88■□□□□ 0.13
LINC00272-202ENST00000612603 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
LINC00272-202ENST00000612603 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
LINC00272-202ENST00000612603 RREB1Q92766 1687 aa15.88■□□□□ 0.13
LINC00272-202ENST00000612603 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
LINC00272-202ENST00000612603 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
LINC00272-202ENST00000612603 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
LINC00272-202ENST00000612603 PSDA5PKW4 1024 aaPredicted RBP15.86■□□□□ 0.13
LINC00272-202ENST00000612603 ANP32CO43423 234 aa15.85■□□□□ 0.13
LINC00272-202ENST00000612603 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
LINC00272-202ENST00000612603 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
LINC00272-202ENST00000612603 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
LINC00272-202ENST00000612603 PLSCR1O15162 318 aa15.84■□□□□ 0.13
LINC00272-202ENST00000612603 NEFMP07197 916 aa15.84■□□□□ 0.13
LINC00272-202ENST00000612603 KCNQ4P56696 695 aa15.84■□□□□ 0.13
LINC00272-202ENST00000612603 TXNRD1Q16881 649 aa15.84■□□□□ 0.13
LINC00272-202ENST00000612603 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
LINC00272-202ENST00000612603 CABP4P57796 275 aa15.83■□□□□ 0.12
LINC00272-202ENST00000612603 R3HDM1Q15032 1099 aaKnown RBP15.83■□□□□ 0.12
LINC00272-202ENST00000612603 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.12
LINC00272-202ENST00000612603 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
LINC00272-202ENST00000612603 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
LINC00272-202ENST00000612603 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
LINC00272-202ENST00000612603 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
LINC00272-202ENST00000612603 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
LINC00272-202ENST00000612603 PIGBQ92521 554 aa15.82■□□□□ 0.12
LINC00272-202ENST00000612603 PHACTR3Q96KR7 559 aa15.82■□□□□ 0.12
LINC00272-202ENST00000612603 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
LINC00272-202ENST00000612603 KDM6AO15550 1401 aaPredicted RBP15.82■□□□□ 0.12
LINC00272-202ENST00000612603 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
LINC00272-202ENST00000612603 LY75O60449 1722 aa15.8■□□□□ 0.12
LINC00272-202ENST00000612603 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
LINC00272-202ENST00000612603 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
LINC00272-202ENST00000612603 FCHSD2O94868 740 aa15.8■□□□□ 0.12
LINC00272-202ENST00000612603 PROM2Q8N271 834 aa15.8■□□□□ 0.12
LINC00272-202ENST00000612603 CCNL1Q9UK58 526 aaPredicted RBP15.8■□□□□ 0.12
LINC00272-202ENST00000612603 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
LINC00272-202ENST00000612603 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 ERVV-2B6SEH9 535 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
LINC00272-202ENST00000612603 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 NFATC2IPQ8NCF5 419 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
LINC00272-202ENST00000612603 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 ASAP1Q9ULH1 1129 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
LINC00272-202ENST00000612603 SMARCC1Q92922 1105 aaPredicted RBP15.77■□□□□ 0.12
LINC00272-202ENST00000612603 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
LINC00272-202ENST00000612603 LRRC4BQ9NT99 713 aa15.77■□□□□ 0.12
LINC00272-202ENST00000612603 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
LINC00272-202ENST00000612603 PNNQ9H307 717 aaKnown RBP15.76■□□□□ 0.11
LINC00272-202ENST00000612603 TEFQ10587 303 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms