RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 APBA3O96018 575 aa24.58■■□□□ 1.53
SEMA3B-211ENST00000612509 TATP17735 454 aaPredicted RBP24.58■■□□□ 1.53
SEMA3B-211ENST00000612509 EYA1Q99502 592 aa24.58■■□□□ 1.53
SEMA3B-211ENST00000612509 PARD3Q8TEW0 1356 aa24.57■■□□□ 1.52
SEMA3B-211ENST00000612509 NUP188Q5SRE5 1749 aa24.56■■□□□ 1.52
SEMA3B-211ENST00000612509 ZCRB1Q8TBF4 217 aaKnown RBP24.56■■□□□ 1.52
SEMA3B-211ENST00000612509 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
SEMA3B-211ENST00000612509 IGSF1Q8N6C5 1336 aa24.56■■□□□ 1.52
SEMA3B-211ENST00000612509 CNGB1Q14028 1251 aaPredicted RBP24.55■■□□□ 1.52
SEMA3B-211ENST00000612509 DDX54Q8TDD1 881 aaKnown RBP24.55■■□□□ 1.52
SEMA3B-211ENST00000612509 EZH2Q15910 746 aaKnown RBP24.54■■□□□ 1.52
SEMA3B-211ENST00000612509 PTF1AQ7RTS3 328 aa24.54■■□□□ 1.52
SEMA3B-211ENST00000612509 CAMKK2Q96RR4 588 aa24.54■■□□□ 1.52
SEMA3B-211ENST00000612509 BTAF1O14981 1849 aa24.54■■□□□ 1.52
SEMA3B-211ENST00000612509 MTHFSP49914 203 aa24.52■■□□□ 1.52
SEMA3B-211ENST00000612509 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
SEMA3B-211ENST00000612509 PCDH11XQ9BZA7 1347 aa24.52■■□□□ 1.52
SEMA3B-211ENST00000612509 PCDH11YQ9BZA8 1340 aa24.52■■□□□ 1.52
SEMA3B-211ENST00000612509 PLEKHG2Q9H7P9 1386 aa24.51■■□□□ 1.51
SEMA3B-211ENST00000612509 COL3A1P02461 1466 aaPredicted RBP24.51■■□□□ 1.51
SEMA3B-211ENST00000612509 KCNQ2O43526 872 aa24.49■■□□□ 1.51
SEMA3B-211ENST00000612509 KAT6BQ8WYB5 2073 aa24.49■■□□□ 1.51
SEMA3B-211ENST00000612509 IL13P35225 146 aa24.48■■□□□ 1.51
SEMA3B-211ENST00000612509 TOGARAM1Q9Y4F4 1720 aa24.48■■□□□ 1.51
SEMA3B-211ENST00000612509 PLSCR1O15162 318 aa24.46■■□□□ 1.51
SEMA3B-211ENST00000612509 KDRP35968 1356 aa24.45■■□□□ 1.5
SEMA3B-211ENST00000612509 CYP27B1O15528 508 aa24.44■■□□□ 1.5
SEMA3B-211ENST00000612509 AEBP1Q8IUX7 1158 aa24.44■■□□□ 1.5
SEMA3B-211ENST00000612509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.44■■□□□ 1.5
SEMA3B-211ENST00000612509 SPG7Q9UQ90 795 aa24.44■■□□□ 1.5
SEMA3B-211ENST00000612509 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
SEMA3B-211ENST00000612509 SULT6B1Q6IMI4 303 aa24.41■■□□□ 1.5
SEMA3B-211ENST00000612509 SYTL4Q96C24 671 aaPredicted RBP24.4■■□□□ 1.5
SEMA3B-211ENST00000612509 ITGB4P16144 1822 aa24.4■■□□□ 1.5
SEMA3B-211ENST00000612509 PPP2R1AP30153 589 aa24.39■■□□□ 1.49
SEMA3B-211ENST00000612509 PRIM1P49642 420 aaKnown RBP24.39■■□□□ 1.49
SEMA3B-211ENST00000612509 PAPPAQ13219 1627 aa24.38■■□□□ 1.49
SEMA3B-211ENST00000612509 LY75O60449 1722 aa24.38■■□□□ 1.49
SEMA3B-211ENST00000612509 PHKG2P15735 406 aa24.37■■□□□ 1.49
SEMA3B-211ENST00000612509 DDX10Q13206 875 aaKnown RBP24.37■■□□□ 1.49
SEMA3B-211ENST00000612509 TXNRD1Q16881 649 aa24.37■■□□□ 1.49
SEMA3B-211ENST00000612509 PSDA5PKW4 1024 aaPredicted RBP24.36■■□□□ 1.49
SEMA3B-211ENST00000612509 NKX1-1Q15270 411 aaPredicted RBP24.36■■□□□ 1.49
SEMA3B-211ENST00000612509 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
SEMA3B-211ENST00000612509 PROM2Q8N271 834 aa24.36■■□□□ 1.49
SEMA3B-211ENST00000612509 PLEKHO1Q53GL0 409 aaPredicted RBP24.35■■□□□ 1.49
SEMA3B-211ENST00000612509 CFAP53Q96M91 514 aa24.35■■□□□ 1.49
SEMA3B-211ENST00000612509 HMOX1P09601 288 aa24.34■■□□□ 1.49
SEMA3B-211ENST00000612509 R3HDM1Q15032 1099 aaKnown RBP24.34■■□□□ 1.49
SEMA3B-211ENST00000612509 AMOTQ4VCS5 1084 aa24.34■■□□□ 1.49
SEMA3B-211ENST00000612509 NBPF14Q5TI25 921 aa24.33■■□□□ 1.49
SEMA3B-211ENST00000612509 ZNF530Q6P9A1 599 aaPredicted RBP24.32■■□□□ 1.48
SEMA3B-211ENST00000612509 ANO8Q9HCE9 1232 aaPredicted RBP24.32■■□□□ 1.48
SEMA3B-211ENST00000612509 KDM6AO15550 1401 aaPredicted RBP24.31■■□□□ 1.48
SEMA3B-211ENST00000612509 U2SURPO15042 1029 aaKnown RBP24.3■■□□□ 1.48
SEMA3B-211ENST00000612509 LRP5O75197 1615 aa24.29■■□□□ 1.48
SEMA3B-211ENST00000612509 HSP90AB1P08238 724 aaKnown RBP24.28■■□□□ 1.48
SEMA3B-211ENST00000612509 MPRIPQ6WCQ1 1025 aa24.28■■□□□ 1.48
SEMA3B-211ENST00000612509 SCN11AQ9UI33 1791 aa24.27■■□□□ 1.48
SEMA3B-211ENST00000612509 C1orf141Q5JVX7 400 aa24.27■■□□□ 1.48
SEMA3B-211ENST00000612509 PALLDQ8WX93 1383 aa24.27■■□□□ 1.48
SEMA3B-211ENST00000612509 CASZ1Q86V15 1759 aa24.26■■□□□ 1.47
SEMA3B-211ENST00000612509 VIRMAQ69YN4 1812 aaKnown RBP24.26■■□□□ 1.47
SEMA3B-211ENST00000612509 RALBP1Q15311 655 aa24.26■■□□□ 1.47
SEMA3B-211ENST00000612509 SLC27A3Q5K4L6 730 aa24.26■■□□□ 1.47
SEMA3B-211ENST00000612509 DCAF5Q96JK2 942 aa24.25■■□□□ 1.47
SEMA3B-211ENST00000612509 LRRC4BQ9NT99 713 aa24.25■■□□□ 1.47
SEMA3B-211ENST00000612509 TMOD3Q9NYL9 352 aa24.25■■□□□ 1.47
SEMA3B-211ENST00000612509 C5P01031 1676 aa24.24■■□□□ 1.47
SEMA3B-211ENST00000612509 PIGBQ92521 554 aa24.24■■□□□ 1.47
SEMA3B-211ENST00000612509 STK32BQ9NY57 414 aa24.24■■□□□ 1.47
SEMA3B-211ENST00000612509 NUDCQ9Y266 331 aa24.24■■□□□ 1.47
SEMA3B-211ENST00000612509 ADAMTS7Q9UKP4 1686 aa24.23■■□□□ 1.47
SEMA3B-211ENST00000612509 CCNL1Q9UK58 526 aaPredicted RBP24.22■■□□□ 1.47
SEMA3B-211ENST00000612509 TAF1LQ8IZX4 1826 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 TUBGCP6Q96RT7 1819 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 QSER1Q2KHR3 1735 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 MRC1P22897 1456 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 ERVV-2B6SEH9 535 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 MTHFSDQ2M296 383 aaKnown RBP24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 AKAP4Q5JQC9 854 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 RSPH6AQ9H0K4 717 aa24.21■■□□□ 1.47
SEMA3B-211ENST00000612509 KCNQ4P56696 695 aa24.2■■□□□ 1.46
SEMA3B-211ENST00000612509 SLC15A2Q16348 729 aa24.2■■□□□ 1.46
SEMA3B-211ENST00000612509 ZNF827Q17R98 1081 aa24.2■■□□□ 1.46
SEMA3B-211ENST00000612509 SMARCC1Q92922 1105 aaPredicted RBP24.2■■□□□ 1.46
SEMA3B-211ENST00000612509 U2AF1L5P0DN76 240 aaPredicted RBP24.19■■□□□ 1.46
SEMA3B-211ENST00000612509 U2AF1Q01081 240 aaKnown RBP eCLIP24.19■■□□□ 1.46
SEMA3B-211ENST00000612509 MYBBP1AQ9BQG0 1328 aaKnown RBP24.18■■□□□ 1.46
SEMA3B-211ENST00000612509 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
SEMA3B-211ENST00000612509 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
SEMA3B-211ENST00000612509 CABP4P57796 275 aa24.16■■□□□ 1.46
SEMA3B-211ENST00000612509 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
SEMA3B-211ENST00000612509 AKT1S1Q96B36 256 aa24.16■■□□□ 1.46
SEMA3B-211ENST00000612509 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
SEMA3B-211ENST00000612509 ASAP1Q9ULH1 1129 aa24.15■■□□□ 1.46
SEMA3B-211ENST00000612509 C4BP0C0L5 1744 aa24.15■■□□□ 1.46
SEMA3B-211ENST00000612509 SRCAPQ6ZRS2 3230 aa24.14■■□□□ 1.46
SEMA3B-211ENST00000612509 ATG3Q9NT62 314 aa24.14■■□□□ 1.45
SEMA3B-211ENST00000612509 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms