RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
UBE2F-223ENST00000612130 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
UBE2F-223ENST00000612130 SDSP20132 328 aa16.85■□□□□ 0.29
UBE2F-223ENST00000612130 IL13P35225 146 aa16.85■□□□□ 0.29
UBE2F-223ENST00000612130 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
UBE2F-223ENST00000612130 C8orf58Q8NAV2 365 aa16.85■□□□□ 0.29
UBE2F-223ENST00000612130 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
UBE2F-223ENST00000612130 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
UBE2F-223ENST00000612130 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
UBE2F-223ENST00000612130 PRPF40AO75400 957 aaKnown RBP16.84■□□□□ 0.29
UBE2F-223ENST00000612130 MBD3O95983 291 aa16.84■□□□□ 0.29
UBE2F-223ENST00000612130 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
UBE2F-223ENST00000612130 RGS12O14924 1447 aa16.84■□□□□ 0.29
UBE2F-223ENST00000612130 CCDC39Q9UFE4 941 aa16.84■□□□□ 0.29
UBE2F-223ENST00000612130 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
UBE2F-223ENST00000612130 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
UBE2F-223ENST00000612130 R3HCC1Q9Y3T6 440 aaKnown RBP16.83■□□□□ 0.28
UBE2F-223ENST00000612130 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
UBE2F-223ENST00000612130 CEP85Q6P2H3 762 aa16.82■□□□□ 0.28
UBE2F-223ENST00000612130 MTERF4Q7Z6M4 381 aaKnown RBP16.82■□□□□ 0.28
UBE2F-223ENST00000612130 ERC2O15083 957 aa16.81■□□□□ 0.28
UBE2F-223ENST00000612130 C16orf71Q8IYS4 520 aaPredicted RBP16.81■□□□□ 0.28
UBE2F-223ENST00000612130 TMEM63CQ9P1W3 806 aa16.81■□□□□ 0.28
UBE2F-223ENST00000612130 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
UBE2F-223ENST00000612130 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
UBE2F-223ENST00000612130 MCM2P49736 904 aa16.81■□□□□ 0.28
UBE2F-223ENST00000612130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBE2F-223ENST00000612130 NEO1Q92859 1461 aa16.8■□□□□ 0.28
UBE2F-223ENST00000612130 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
UBE2F-223ENST00000612130 DYNC1I1O14576 645 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 XPCQ01831 940 aaPredicted RBP16.79■□□□□ 0.28
UBE2F-223ENST00000612130 MSH6P52701 1360 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 PTPRCP08575 1304 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 UQCRHLA0A096LP55 91 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 UQCRHP07919 91 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 OSBPL3Q9H4L5 887 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
UBE2F-223ENST00000612130 SYCE3A1L190 88 aa16.78■□□□□ 0.28
UBE2F-223ENST00000612130 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
UBE2F-223ENST00000612130 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.28
UBE2F-223ENST00000612130 BRD1O95696 1058 aa16.76■□□□□ 0.27
UBE2F-223ENST00000612130 FBLN1P23142 703 aa16.76■□□□□ 0.27
UBE2F-223ENST00000612130 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
UBE2F-223ENST00000612130 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
UBE2F-223ENST00000612130 HMMRO75330 724 aa16.76■□□□□ 0.27
UBE2F-223ENST00000612130 CUL4AQ13619 759 aa16.76■□□□□ 0.27
UBE2F-223ENST00000612130 INTS4Q96HW7 963 aaKnown RBP16.75■□□□□ 0.27
UBE2F-223ENST00000612130 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
UBE2F-223ENST00000612130 FAM13BQ9NYF5 915 aa16.75■□□□□ 0.27
UBE2F-223ENST00000612130 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
UBE2F-223ENST00000612130 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
UBE2F-223ENST00000612130 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
UBE2F-223ENST00000612130 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
UBE2F-223ENST00000612130 MON2Q7Z3U7 1717 aa16.74■□□□□ 0.27
UBE2F-223ENST00000612130 FAM83GA6ND36 823 aa16.74■□□□□ 0.27
UBE2F-223ENST00000612130 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
UBE2F-223ENST00000612130 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
UBE2F-223ENST00000612130 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
UBE2F-223ENST00000612130 PHF14O94880 888 aa16.73■□□□□ 0.27
UBE2F-223ENST00000612130 ANAPC15P60006 121 aa16.73■□□□□ 0.27
UBE2F-223ENST00000612130 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
UBE2F-223ENST00000612130 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
UBE2F-223ENST00000612130 MCCP23508 829 aa16.73■□□□□ 0.27
UBE2F-223ENST00000612130 NEK4P51957 841 aa16.73■□□□□ 0.27
UBE2F-223ENST00000612130 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE2F-223ENST00000612130 PDE1AP54750 535 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 IL17RAQ96F46 866 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 MEIS3Q99687 375 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 CHL1O00533 1208 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 KIAA2012Q0VF49 1180 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 NME9Q86XW9 330 aa16.72■□□□□ 0.27
UBE2F-223ENST00000612130 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
UBE2F-223ENST00000612130 COG3Q96JB2 828 aa16.71■□□□□ 0.27
UBE2F-223ENST00000612130 FAM184AQ8NB25 1140 aa16.7■□□□□ 0.26
UBE2F-223ENST00000612130 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
UBE2F-223ENST00000612130 C3P01024 1663 aa16.7■□□□□ 0.26
UBE2F-223ENST00000612130 APBB1O00213 710 aa16.7■□□□□ 0.26
UBE2F-223ENST00000612130 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
UBE2F-223ENST00000612130 UVSSAQ2YD98 709 aa16.69■□□□□ 0.26
UBE2F-223ENST00000612130 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
UBE2F-223ENST00000612130 CHAMP1Q96JM3 812 aa16.69■□□□□ 0.26
UBE2F-223ENST00000612130 SALL3Q9BXA9 1300 aa16.69■□□□□ 0.26
UBE2F-223ENST00000612130 CPS1P31327 1500 aa16.69■□□□□ 0.26
UBE2F-223ENST00000612130 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
UBE2F-223ENST00000612130 EPB41L2O43491 1005 aaKnown RBP16.68■□□□□ 0.26
UBE2F-223ENST00000612130 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
UBE2F-223ENST00000612130 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
UBE2F-223ENST00000612130 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
UBE2F-223ENST00000612130 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
UBE2F-223ENST00000612130 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBE2F-223ENST00000612130 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
UBE2F-223ENST00000612130 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
UBE2F-223ENST00000612130 FOXD4L5Q5VV16 416 aaPredicted RBP16.67■□□□□ 0.26
UBE2F-223ENST00000612130 FOXD4L4Q8WXT5 416 aaPredicted RBP16.67■□□□□ 0.26
UBE2F-223ENST00000612130 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
UBE2F-223ENST00000612130 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
UBE2F-223ENST00000612130 WASLO00401 505 aaPredicted RBP16.66■□□□□ 0.26
UBE2F-223ENST00000612130 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms