RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
CBWD3-208ENST00000612050 PLSCR1O15162 318 aa16.77■□□□□ 0.27
CBWD3-208ENST00000612050 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.27
CBWD3-208ENST00000612050 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
CBWD3-208ENST00000612050 ACSBG1Q96GR2 724 aa16.75■□□□□ 0.27
CBWD3-208ENST00000612050 PCDH11XQ9BZA7 1347 aa16.75■□□□□ 0.27
CBWD3-208ENST00000612050 PCDH11YQ9BZA8 1340 aa16.75■□□□□ 0.27
CBWD3-208ENST00000612050 RREB1Q92766 1687 aa16.74■□□□□ 0.27
CBWD3-208ENST00000612050 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
CBWD3-208ENST00000612050 MEGF6O75095 1541 aa16.73■□□□□ 0.27
CBWD3-208ENST00000612050 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-208ENST00000612050 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-208ENST00000612050 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-208ENST00000612050 R3HDM1Q15032 1099 aaKnown RBP16.71■□□□□ 0.27
CBWD3-208ENST00000612050 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-208ENST00000612050 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
CBWD3-208ENST00000612050 HMGB2P26583 209 aaKnown RBP16.7■□□□□ 0.26
CBWD3-208ENST00000612050 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
CBWD3-208ENST00000612050 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
CBWD3-208ENST00000612050 EYA1Q99502 592 aa16.7■□□□□ 0.26
CBWD3-208ENST00000612050 BTAF1O14981 1849 aa16.69■□□□□ 0.26
CBWD3-208ENST00000612050 KCNQ2O43526 872 aa16.69■□□□□ 0.26
CBWD3-208ENST00000612050 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
CBWD3-208ENST00000612050 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
CBWD3-208ENST00000612050 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
CBWD3-208ENST00000612050 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-208ENST00000612050 TXNRD1Q16881 649 aa16.68■□□□□ 0.26
CBWD3-208ENST00000612050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
CBWD3-208ENST00000612050 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
CBWD3-208ENST00000612050 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-208ENST00000612050 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
CBWD3-208ENST00000612050 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
CBWD3-208ENST00000612050 PRIM1P49642 420 aaKnown RBP16.66■□□□□ 0.26
CBWD3-208ENST00000612050 NCAPD2Q15021 1401 aa16.66■□□□□ 0.26
CBWD3-208ENST00000612050 IGSF1Q8N6C5 1336 aa16.65■□□□□ 0.26
CBWD3-208ENST00000612050 PTF1AQ7RTS3 328 aa16.65■□□□□ 0.26
CBWD3-208ENST00000612050 MTHFSP49914 203 aa16.64■□□□□ 0.25
CBWD3-208ENST00000612050 AMOTQ4VCS5 1084 aa16.64■□□□□ 0.25
CBWD3-208ENST00000612050 PLEKHO1Q53GL0 409 aaPredicted RBP16.64■□□□□ 0.25
CBWD3-208ENST00000612050 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
CBWD3-208ENST00000612050 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.25
CBWD3-208ENST00000612050 HSP90AB1P08238 724 aaKnown RBP16.63■□□□□ 0.25
CBWD3-208ENST00000612050 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
CBWD3-208ENST00000612050 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
CBWD3-208ENST00000612050 LRP5O75197 1615 aa16.62■□□□□ 0.25
CBWD3-208ENST00000612050 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
CBWD3-208ENST00000612050 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
CBWD3-208ENST00000612050 CYP27B1O15528 508 aa16.61■□□□□ 0.25
CBWD3-208ENST00000612050 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
CBWD3-208ENST00000612050 MPRIPQ6WCQ1 1025 aa16.61■□□□□ 0.25
CBWD3-208ENST00000612050 SMARCC1Q92922 1105 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-208ENST00000612050 PHKG2P15735 406 aa16.59■□□□□ 0.25
CBWD3-208ENST00000612050 IL13P35225 146 aa16.59■□□□□ 0.25
CBWD3-208ENST00000612050 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
CBWD3-208ENST00000612050 PROM2Q8N271 834 aa16.59■□□□□ 0.25
CBWD3-208ENST00000612050 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
CBWD3-208ENST00000612050 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-208ENST00000612050 ZNF530Q6P9A1 599 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-208ENST00000612050 SPON1Q9HCB6 807 aa16.58■□□□□ 0.24
CBWD3-208ENST00000612050 PPP1R1BQ9UD71 204 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-208ENST00000612050 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-208ENST00000612050 NUDCQ9Y266 331 aa16.57■□□□□ 0.24
CBWD3-208ENST00000612050 ITGB4P16144 1822 aa16.56■□□□□ 0.24
CBWD3-208ENST00000612050 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
CBWD3-208ENST00000612050 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
CBWD3-208ENST00000612050 LY75O60449 1722 aa16.56■□□□□ 0.24
CBWD3-208ENST00000612050 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-208ENST00000612050 KDRP35968 1356 aa16.55■□□□□ 0.24
CBWD3-208ENST00000612050 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
CBWD3-208ENST00000612050 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
CBWD3-208ENST00000612050 HMOX1P09601 288 aa16.53■□□□□ 0.24
CBWD3-208ENST00000612050 AEBP1Q8IUX7 1158 aa16.53■□□□□ 0.24
CBWD3-208ENST00000612050 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
CBWD3-208ENST00000612050 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
CBWD3-208ENST00000612050 CABP4P57796 275 aa16.53■□□□□ 0.24
CBWD3-208ENST00000612050 LRRC4BQ9NT99 713 aa16.52■□□□□ 0.23
CBWD3-208ENST00000612050 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
CBWD3-208ENST00000612050 NEFMP07197 916 aa16.51■□□□□ 0.23
CBWD3-208ENST00000612050 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
CBWD3-208ENST00000612050 PIGBQ92521 554 aa16.51■□□□□ 0.23
CBWD3-208ENST00000612050 KCNA4P22459 653 aa16.5■□□□□ 0.23
CBWD3-208ENST00000612050 PPP2R1AP30153 589 aa16.5■□□□□ 0.23
CBWD3-208ENST00000612050 MTFR1LQ9H019 292 aa16.5■□□□□ 0.23
CBWD3-208ENST00000612050 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
CBWD3-208ENST00000612050 C5P01031 1676 aa16.5■□□□□ 0.23
CBWD3-208ENST00000612050 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
CBWD3-208ENST00000612050 FLAD1Q8NFF5 587 aa16.49■□□□□ 0.23
CBWD3-208ENST00000612050 SLC16A10Q8TF71 515 aa16.49■□□□□ 0.23
CBWD3-208ENST00000612050 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
CBWD3-208ENST00000612050 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
CBWD3-208ENST00000612050 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
CBWD3-208ENST00000612050 AK7Q96M32 723 aa16.48■□□□□ 0.23
CBWD3-208ENST00000612050 KCNQ4P56696 695 aa16.47■□□□□ 0.23
CBWD3-208ENST00000612050 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
CBWD3-208ENST00000612050 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
CBWD3-208ENST00000612050 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
CBWD3-208ENST00000612050 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
CBWD3-208ENST00000612050 POLD1P28340 1107 aa16.46■□□□□ 0.23
CBWD3-208ENST00000612050 SIK1P57059 783 aa16.46■□□□□ 0.23
CBWD3-208ENST00000612050 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms