RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 MAGI3Q5TCQ9 1506 aa12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 NUP62CLQ9H1M0 184 aa12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 JAKMIP1Q96N16 626 aaKnown RBP12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 PKNOX2Q96KN3 472 aa12.99□□□□□ -0.33
CDC42EP3-206ENST00000611976 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 KIF1BPQ96EK5 621 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 WASHC4Q2M389 1173 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 ERICH2A1L162 156 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 MCM10Q7L590 875 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 SPATA32Q96LK8 384 aa12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 DNAJC2Q99543 621 aaKnown RBP12.98□□□□□ -0.33
CDC42EP3-206ENST00000611976 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 KRT32Q14532 448 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 CFAP45Q9UL16 551 aa12.97□□□□□ -0.33
CDC42EP3-206ENST00000611976 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 AACSQ86V21 672 aa12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 NME9Q86XW9 330 aa12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 SMC2O95347 1197 aa12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
CDC42EP3-206ENST00000611976 RLBP1P12271 317 aa12.96□□□□□ -0.34
CDC42EP3-206ENST00000611976 STK38Q15208 465 aa12.96□□□□□ -0.34
CDC42EP3-206ENST00000611976 CCDC47Q96A33 483 aaKnown RBP12.96□□□□□ -0.34
CDC42EP3-206ENST00000611976 KDM5CP41229 1560 aa12.96□□□□□ -0.34
CDC42EP3-206ENST00000611976 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
CDC42EP3-206ENST00000611976 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
CDC42EP3-206ENST00000611976 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
CDC42EP3-206ENST00000611976 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
CDC42EP3-206ENST00000611976 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
CDC42EP3-206ENST00000611976 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
CDC42EP3-206ENST00000611976 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 STK3Q13188 491 aa12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 IDI1Q13907 227 aa12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
CDC42EP3-206ENST00000611976 SEC24BO95487 1268 aa12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 MPNDQ8N594 471 aa12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 CEBPZQ03701 1054 aaKnown RBP12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
CDC42EP3-206ENST00000611976 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 ME1P48163 572 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 ZBTB40Q9NUA8 1239 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 FYB1O15117 783 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 LRSAM1Q6UWE0 723 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 CCDC83Q8IWF9 413 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 XBP1P17861 261 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 KDM6BO15054 1643 aa12.92□□□□□ -0.34
CDC42EP3-206ENST00000611976 TRAPPC8Q9Y2L5 1435 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 ZMYM3Q14202 1370 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 PDILTQ8N807 584 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 PANK2Q9BZ23 570 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 SIL1Q9H173 461 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 MARCH6O60337 910 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 EVA1CP58658 441 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
CDC42EP3-206ENST00000611976 F6X3S4 739 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 SETQ01105 290 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 HSP90B2PQ58FF3 399 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 PDCL2Q8N4E4 241 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 SDSP20132 328 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms