RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 CCDC8Q9H0W5 538 aaPredicted RBP16.54■□□□□ 0.24
MUC1-223ENST00000611571 RRAGDQ9NQL2 400 aaPredicted RBP16.54■□□□□ 0.24
MUC1-223ENST00000611571 KINO60870 393 aaKnown RBP16.54■□□□□ 0.24
MUC1-223ENST00000611571 BLOC1S2Q6QNY1 142 aa16.54■□□□□ 0.24
MUC1-223ENST00000611571 PKNOX2Q96KN3 472 aa16.54■□□□□ 0.24
MUC1-223ENST00000611571 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
MUC1-223ENST00000611571 AKAP17AQ02040 695 aaKnown RBP16.53■□□□□ 0.24
MUC1-223ENST00000611571 TRIM29Q14134 588 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 CKAP2LQ8IYA6 745 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 PDILTQ8N807 584 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
MUC1-223ENST00000611571 CLSTN1O94985 981 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 SMC2O95347 1197 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 ME1P48163 572 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 KRT85P78386 507 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
MUC1-223ENST00000611571 JARID2Q92833 1246 aaPredicted RBP16.53■□□□□ 0.24
MUC1-223ENST00000611571 CCDC34Q96HJ3 373 aa16.53■□□□□ 0.24
MUC1-223ENST00000611571 PDCP20941 246 aa16.52■□□□□ 0.24
MUC1-223ENST00000611571 FAM177A1Q8N128 213 aaPredicted RBP16.52■□□□□ 0.24
MUC1-223ENST00000611571 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
MUC1-223ENST00000611571 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.24
MUC1-223ENST00000611571 KIF14Q15058 1648 aa16.52■□□□□ 0.24
MUC1-223ENST00000611571 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.23
MUC1-223ENST00000611571 TTC22Q5TAA0 569 aa16.52■□□□□ 0.23
MUC1-223ENST00000611571 TPM3P06753 285 aa16.51■□□□□ 0.23
MUC1-223ENST00000611571 FLIIQ13045 1269 aa16.51■□□□□ 0.23
MUC1-223ENST00000611571 MPRIPQ6WCQ1 1025 aa16.51■□□□□ 0.23
MUC1-223ENST00000611571 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
MUC1-223ENST00000611571 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
MUC1-223ENST00000611571 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
MUC1-223ENST00000611571 PLEKHO1Q53GL0 409 aaPredicted RBP16.5■□□□□ 0.23
MUC1-223ENST00000611571 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 GNAT3A8MTJ3 354 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 VAMP4O75379 141 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 CEBPAP49715 358 aaPredicted RBP16.5■□□□□ 0.23
MUC1-223ENST00000611571 GUCY1B3Q02153 619 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 ABCC11Q96J66 1382 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
MUC1-223ENST00000611571 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
MUC1-223ENST00000611571 FOXO3O43524 673 aa16.49■□□□□ 0.23
MUC1-223ENST00000611571 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
MUC1-223ENST00000611571 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
MUC1-223ENST00000611571 FKBP4Q02790 459 aaKnown RBP eCLIP16.49■□□□□ 0.23
MUC1-223ENST00000611571 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
MUC1-223ENST00000611571 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
MUC1-223ENST00000611571 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
MUC1-223ENST00000611571 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
MUC1-223ENST00000611571 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
MUC1-223ENST00000611571 PRIM1P49642 420 aaKnown RBP16.48■□□□□ 0.23
MUC1-223ENST00000611571 KLHL40Q2TBA0 621 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 STK38Q15208 465 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 NUP62CLQ9H1M0 184 aa16.48■□□□□ 0.23
MUC1-223ENST00000611571 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
MUC1-223ENST00000611571 MAGI3Q5TCQ9 1506 aa16.47■□□□□ 0.23
MUC1-223ENST00000611571 HMGN5P82970 282 aaKnown RBP16.47■□□□□ 0.23
MUC1-223ENST00000611571 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
MUC1-223ENST00000611571 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
MUC1-223ENST00000611571 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
MUC1-223ENST00000611571 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
MUC1-223ENST00000611571 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
MUC1-223ENST00000611571 RAD21O60216 631 aa16.46■□□□□ 0.23
MUC1-223ENST00000611571 CBX1P83916 185 aa16.46■□□□□ 0.23
MUC1-223ENST00000611571 A0A0U1RQG5 324 aaPredicted RBP16.46■□□□□ 0.23
MUC1-223ENST00000611571 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
MUC1-223ENST00000611571 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
MUC1-223ENST00000611571 SYCP2Q9BX26 1530 aa16.46■□□□□ 0.22
MUC1-223ENST00000611571 LETM1O95202 739 aaPredicted RBP16.45■□□□□ 0.22
MUC1-223ENST00000611571 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 KDM6BO15054 1643 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 CLCN1P35523 988 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 PDE1AP54750 535 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 MAP7D2Q96T17 732 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
MUC1-223ENST00000611571 SKIDA1Q1XH10 827 aa16.45■□□□□ 0.22
MUC1-223ENST00000611571 LRRFIP1Q32MZ4 808 aaKnown RBP16.45■□□□□ 0.22
MUC1-223ENST00000611571 PCMTD1Q96MG8 357 aaPredicted RBP16.45■□□□□ 0.22
MUC1-223ENST00000611571 MARCH6O60337 910 aa16.44■□□□□ 0.22
MUC1-223ENST00000611571 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
MUC1-223ENST00000611571 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
MUC1-223ENST00000611571 A2MP01023 1474 aa16.44■□□□□ 0.22
MUC1-223ENST00000611571 GLRX3O76003 335 aaKnown RBP16.43■□□□□ 0.22
MUC1-223ENST00000611571 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
MUC1-223ENST00000611571 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
MUC1-223ENST00000611571 NOC3LQ8WTT2 800 aaKnown RBP16.43■□□□□ 0.22
MUC1-223ENST00000611571 CCDC112Q8NEF3 446 aa16.43■□□□□ 0.22
MUC1-223ENST00000611571 TTC12Q9H892 705 aaPredicted RBP16.43■□□□□ 0.22
MUC1-223ENST00000611571 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
MUC1-223ENST00000611571 CD109Q6YHK3 1445 aa16.43■□□□□ 0.22
MUC1-223ENST00000611571 CPA1P15085 419 aa16.43■□□□□ 0.22
MUC1-223ENST00000611571 ADCY5O95622 1261 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 MAP3K11Q16584 847 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms