RNA–Protein interactions for RNA: ENST00000611255.4

LRMDA-215, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-215ENST00000611255 ZCRB1Q8TBF4 217 aaKnown RBP31.75■■■□□ 2.67
LRMDA-215ENST00000611255 NSD2O96028 1365 aa31.74■■■□□ 2.67
LRMDA-215ENST00000611255 SHANK3Q9BYB0 1731 aa31.73■■■□□ 2.67
LRMDA-215ENST00000611255 COL24A1Q17RW2 1714 aa31.72■■■□□ 2.67
LRMDA-215ENST00000611255 DOT1LQ8TEK3 1739 aa31.72■■■□□ 2.67
LRMDA-215ENST00000611255 MEGF6O75095 1541 aa31.72■■■□□ 2.67
LRMDA-215ENST00000611255 SLC24A1O60721 1099 aa31.71■■■□□ 2.67
LRMDA-215ENST00000611255 TFCP2L1Q9NZI6 479 aa31.71■■■□□ 2.67
LRMDA-215ENST00000611255 LY75O60449 1722 aa31.71■■■□□ 2.67
LRMDA-215ENST00000611255 TUBGCP6Q96RT7 1819 aa31.7■■■□□ 2.67
LRMDA-215ENST00000611255 POLD1P28340 1107 aa31.69■■■□□ 2.66
LRMDA-215ENST00000611255 RRS1Q15050 365 aaKnown RBP31.69■■■□□ 2.66
LRMDA-215ENST00000611255 NBPF6Q5VWK0 638 aa31.69■■■□□ 2.66
LRMDA-215ENST00000611255 NBPF4Q96M43 638 aa31.69■■■□□ 2.66
LRMDA-215ENST00000611255 RTL1A6NKG5 1358 aa31.68■■■□□ 2.66
LRMDA-215ENST00000611255 FYB1O15117 783 aa31.67■■■□□ 2.66
LRMDA-215ENST00000611255 GPR162Q16538 588 aa31.67■■■□□ 2.66
LRMDA-215ENST00000611255 KLHL34Q8N239 644 aa31.65■■■□□ 2.66
LRMDA-215ENST00000611255 GGNBP2Q9H3C7 697 aa31.65■■■□□ 2.66
LRMDA-215ENST00000611255 CCNL1Q9UK58 526 aaPredicted RBP31.64■■■□□ 2.66
LRMDA-215ENST00000611255 GOLGB1Q14789 3259 aaKnown RBP31.64■■■□□ 2.65
LRMDA-215ENST00000611255 USHBP1Q8N6Y0 703 aa31.63■■■□□ 2.65
LRMDA-215ENST00000611255 CGNL1Q0VF96 1302 aa31.62■■■□□ 2.65
LRMDA-215ENST00000611255 NLGN2Q8NFZ4 835 aa31.6■■■□□ 2.65
LRMDA-215ENST00000611255 USP47Q96K76 1375 aa31.59■■■□□ 2.65
LRMDA-215ENST00000611255 TMF1P82094 1093 aa31.58■■■□□ 2.65
LRMDA-215ENST00000611255 COL23A1Q86Y22 540 aaPredicted RBP31.58■■■□□ 2.65
LRMDA-215ENST00000611255 RAPGEF4Q8WZA2 1011 aa31.58■■■□□ 2.65
LRMDA-215ENST00000611255 HSP90AB2PQ58FF8 381 aa31.57■■■□□ 2.64
LRMDA-215ENST00000611255 SMG6Q86US8 1419 aaKnown RBP31.56■■■□□ 2.64
LRMDA-215ENST00000611255 TATP17735 454 aaPredicted RBP31.55■■■□□ 2.64
LRMDA-215ENST00000611255 C1QTNF8P60827 252 aa31.55■■■□□ 2.64
LRMDA-215ENST00000611255 PELP1Q8IZL8 1130 aaKnown RBP31.55■■■□□ 2.64
LRMDA-215ENST00000611255 INSRP06213 1382 aa31.55■■■□□ 2.64
LRMDA-215ENST00000611255 MSH5O43196 834 aa31.53■■■□□ 2.64
LRMDA-215ENST00000611255 PCDH11XQ9BZA7 1347 aa31.5■■■□□ 2.63
LRMDA-215ENST00000611255 PCDH11YQ9BZA8 1340 aa31.5■■■□□ 2.63
LRMDA-215ENST00000611255 FLT4P35916 1363 aa31.5■■■□□ 2.63
LRMDA-215ENST00000611255 KIF24Q5T7B8 1368 aa31.49■■■□□ 2.63
LRMDA-215ENST00000611255 KIF20BQ96Q89 1820 aa31.49■■■□□ 2.63
LRMDA-215ENST00000611255 CYP27B1O15528 508 aa31.48■■■□□ 2.63
LRMDA-215ENST00000611255 MSL1Q68DK7 614 aa31.48■■■□□ 2.63
LRMDA-215ENST00000611255 C5P01031 1676 aa31.48■■■□□ 2.63
LRMDA-215ENST00000611255 SENP3-EIF4A1A0A087X0R7 540 aa31.47■■■□□ 2.63
LRMDA-215ENST00000611255 YBX3P16989 372 aaKnown RBP eCLIP31.47■■■□□ 2.63
LRMDA-215ENST00000611255 MPRIPQ6WCQ1 1025 aa31.46■■■□□ 2.63
LRMDA-215ENST00000611255 CARD14Q9BXL6 1004 aa31.46■■■□□ 2.63
LRMDA-215ENST00000611255 PALLDQ8WX93 1383 aa31.45■■■□□ 2.63
LRMDA-215ENST00000611255 CDCA8Q53HL2 280 aa31.44■■■□□ 2.62
LRMDA-215ENST00000611255 EMILIN1Q9Y6C2 1016 aa31.44■■■□□ 2.62
LRMDA-215ENST00000611255 TAF1LQ8IZX4 1826 aa31.44■■■□□ 2.62
LRMDA-215ENST00000611255 GRIN3BO60391 1043 aa31.43■■■□□ 2.62
LRMDA-215ENST00000611255 FLAD1Q8NFF5 587 aa31.42■■■□□ 2.62
LRMDA-215ENST00000611255 TOGARAM1Q9Y4F4 1720 aa31.41■■■□□ 2.62
LRMDA-215ENST00000611255 HMGB2P26583 209 aaKnown RBP31.41■■■□□ 2.62
LRMDA-215ENST00000611255 ITGB4P16144 1822 aa31.4■■■□□ 2.62
LRMDA-215ENST00000611255 GIGYF1O75420 1035 aaPredicted RBP31.4■■■□□ 2.62
LRMDA-215ENST00000611255 PKD1L3Q7Z443 1732 aa31.38■■■□□ 2.61
LRMDA-215ENST00000611255 SMARCC1Q92922 1105 aaPredicted RBP31.38■■■□□ 2.61
LRMDA-215ENST00000611255 CD2APQ9Y5K6 639 aa31.38■■■□□ 2.61
LRMDA-215ENST00000611255 NCAPD2Q15021 1401 aa31.38■■■□□ 2.61
LRMDA-215ENST00000611255 NKX1-1Q15270 411 aaPredicted RBP31.37■■■□□ 2.61
LRMDA-215ENST00000611255 AMIGO3Q86WK7 504 aa31.37■■■□□ 2.61
LRMDA-215ENST00000611255 PIGBQ92521 554 aa31.37■■■□□ 2.61
LRMDA-215ENST00000611255 NSD3Q9BZ95 1437 aa31.37■■■□□ 2.61
LRMDA-215ENST00000611255 C4BP0C0L5 1744 aa31.36■■■□□ 2.61
LRMDA-215ENST00000611255 PPM1GO15355 546 aaPredicted RBP31.32■■■□□ 2.6
LRMDA-215ENST00000611255 SMIM5Q71RC9 77 aa31.32■■■□□ 2.6
LRMDA-215ENST00000611255 AK7Q96M32 723 aa31.32■■■□□ 2.6
LRMDA-215ENST00000611255 WASHC2AQ641Q2 1341 aa31.31■■■□□ 2.6
LRMDA-215ENST00000611255 SPG7Q9UQ90 795 aa31.31■■■□□ 2.6
LRMDA-215ENST00000611255 ANKRD26Q9UPS8 1709 aa31.31■■■□□ 2.6
LRMDA-215ENST00000611255 UBR3Q6ZT12 1888 aa31.3■■■□□ 2.6
LRMDA-215ENST00000611255 EYA1Q99502 592 aa31.3■■■□□ 2.6
LRMDA-215ENST00000611255 MAP2P11137 1827 aaKnown RBP31.3■■■□□ 2.6
LRMDA-215ENST00000611255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.28■■■□□ 2.6
LRMDA-215ENST00000611255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.28■■■□□ 2.64e-6■□□□□ 10.7
LRMDA-215ENST00000611255 LOC102724428A0A0B4J2F2 783 aa31.27■■■□□ 2.6
LRMDA-215ENST00000611255 PHF14O94880 888 aa31.27■■■□□ 2.6
LRMDA-215ENST00000611255 SIK1P57059 783 aa31.27■■■□□ 2.6
LRMDA-215ENST00000611255 LINC00116Q8NCU8 138 aa31.27■■■□□ 2.6
LRMDA-215ENST00000611255 POLKQ9UBT6 870 aa31.25■■■□□ 2.59
LRMDA-215ENST00000611255 ATP10DQ9P241 1426 aa31.24■■■□□ 2.59
LRMDA-215ENST00000611255 SSFA2P28290 1259 aa31.24■■■□□ 2.59
LRMDA-215ENST00000611255 ASAP1Q9ULH1 1129 aa31.24■■■□□ 2.59
LRMDA-215ENST00000611255 TMOD3Q9NYL9 352 aa31.23■■■□□ 2.59
LRMDA-215ENST00000611255 CEP350Q5VT06 3117 aa31.22■■■□□ 2.59
LRMDA-215ENST00000611255 PHKG2P15735 406 aa31.22■■■□□ 2.59
LRMDA-215ENST00000611255 TRIM26Q12899 539 aaPredicted RBP31.22■■■□□ 2.59
LRMDA-215ENST00000611255 ITPK1Q13572 414 aa31.22■■■□□ 2.59
LRMDA-215ENST00000611255 IFNL2Q8IZJ0 200 aa31.22■■■□□ 2.59
LRMDA-215ENST00000611255 IGSF1Q8N6C5 1336 aa31.2■■■□□ 2.58
LRMDA-215ENST00000611255 ADCY9O60503 1353 aa31.18■■■□□ 2.58
LRMDA-215ENST00000611255 ATP6V1AP38606 617 aa31.18■■■□□ 2.58
LRMDA-215ENST00000611255 ATG3Q9NT62 314 aa31.18■■■□□ 2.58
LRMDA-215ENST00000611255 EIF4A2Q14240 407 aaKnown RBP31.17■■■□□ 2.58
LRMDA-215ENST00000611255 GNPATO15228 680 aa31.16■■■□□ 2.58
LRMDA-215ENST00000611255 TIMELESSQ9UNS1 1208 aa31.16■■■□□ 2.58
LRMDA-215ENST00000611255 WWC3Q9ULE0 1092 aa31.15■■■□□ 2.58
LRMDA-215ENST00000611255 GPBP1L1Q9HC44 474 aaPredicted RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms