RNA–Protein interactions for RNA: ENST00000610435.4

KHDC1-207, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KHDC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-207ENST00000610435 COL24A1Q17RW2 1714 aa25.92■■□□□ 1.74
KHDC1-207ENST00000610435 AKT1S1Q96B36 256 aa25.92■■□□□ 1.74
KHDC1-207ENST00000610435 SYTL4Q96C24 671 aaPredicted RBP25.92■■□□□ 1.74
KHDC1-207ENST00000610435 PRIM1P49642 420 aaKnown RBP25.9■■□□□ 1.74
KHDC1-207ENST00000610435 TMF1P82094 1093 aa25.9■■□□□ 1.74
KHDC1-207ENST00000610435 ZCRB1Q8TBF4 217 aaKnown RBP25.9■■□□□ 1.74
KHDC1-207ENST00000610435 NSD2O96028 1365 aa25.9■■□□□ 1.74
KHDC1-207ENST00000610435 USP47Q96K76 1375 aa25.9■■□□□ 1.74
KHDC1-207ENST00000610435 SMG6Q86US8 1419 aaKnown RBP25.89■■□□□ 1.74
KHDC1-207ENST00000610435 RRS1Q15050 365 aaKnown RBP25.88■■□□□ 1.73
KHDC1-207ENST00000610435 SLC16A10Q8TF71 515 aa25.88■■□□□ 1.73
KHDC1-207ENST00000610435 GGNBP2Q9H3C7 697 aa25.88■■□□□ 1.73
KHDC1-207ENST00000610435 FYB1O15117 783 aa25.87■■□□□ 1.73
KHDC1-207ENST00000610435 PNPLA7Q6ZV29 1317 aa25.87■■□□□ 1.73
KHDC1-207ENST00000610435 NBPF6Q5VWK0 638 aa25.85■■□□□ 1.73
KHDC1-207ENST00000610435 NBPF4Q96M43 638 aa25.85■■□□□ 1.73
KHDC1-207ENST00000610435 TFCP2L1Q9NZI6 479 aa25.85■■□□□ 1.73
KHDC1-207ENST00000610435 CGNL1Q0VF96 1302 aa25.85■■□□□ 1.73
KHDC1-207ENST00000610435 KCNQ4P56696 695 aa25.84■■□□□ 1.73
KHDC1-207ENST00000610435 UTRNP46939 3433 aa25.84■■□□□ 1.73
KHDC1-207ENST00000610435 POLD1P28340 1107 aa25.83■■□□□ 1.73
KHDC1-207ENST00000610435 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
KHDC1-207ENST00000610435 ZNF784Q8NCA9 323 aaPredicted RBP25.82■■□□□ 1.72
KHDC1-207ENST00000610435 RAPGEF4Q8WZA2 1011 aa25.82■■□□□ 1.72
KHDC1-207ENST00000610435 CCNL1Q9UK58 526 aaPredicted RBP25.81■■□□□ 1.72
KHDC1-207ENST00000610435 INSRP06213 1382 aa25.81■■□□□ 1.72
KHDC1-207ENST00000610435 FLT4P35916 1363 aa25.81■■□□□ 1.72
KHDC1-207ENST00000610435 CDCA8Q53HL2 280 aa25.8■■□□□ 1.72
KHDC1-207ENST00000610435 KLHL34Q8N239 644 aa25.8■■□□□ 1.72
KHDC1-207ENST00000610435 C5P01031 1676 aa25.8■■□□□ 1.72
KHDC1-207ENST00000610435 KIF24Q5T7B8 1368 aa25.8■■□□□ 1.72
KHDC1-207ENST00000610435 TATP17735 454 aaPredicted RBP25.79■■□□□ 1.72
KHDC1-207ENST00000610435 HSP90AB2PQ58FF8 381 aa25.77■■□□□ 1.72
KHDC1-207ENST00000610435 PCDH11XQ9BZA7 1347 aa25.77■■□□□ 1.72
KHDC1-207ENST00000610435 PCDH11YQ9BZA8 1340 aa25.77■■□□□ 1.72
KHDC1-207ENST00000610435 GPR162Q16538 588 aa25.76■■□□□ 1.71
KHDC1-207ENST00000610435 PKD1L3Q7Z443 1732 aa25.76■■□□□ 1.71
KHDC1-207ENST00000610435 TAF1LQ8IZX4 1826 aa25.76■■□□□ 1.71
KHDC1-207ENST00000610435 TOGARAM1Q9Y4F4 1720 aa25.75■■□□□ 1.71
KHDC1-207ENST00000610435 ANKRD26Q9UPS8 1709 aa25.74■■□□□ 1.71
KHDC1-207ENST00000610435 NSD3Q9BZ95 1437 aa25.74■■□□□ 1.71
KHDC1-207ENST00000610435 ITGB4P16144 1822 aa25.74■■□□□ 1.71
KHDC1-207ENST00000610435 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
KHDC1-207ENST00000610435 MSH5O43196 834 aa25.71■■□□□ 1.71
KHDC1-207ENST00000610435 PALLDQ8WX93 1383 aa25.7■■□□□ 1.71
KHDC1-207ENST00000610435 COL23A1Q86Y22 540 aaPredicted RBP25.7■■□□□ 1.7
KHDC1-207ENST00000610435 PELP1Q8IZL8 1130 aaKnown RBP25.7■■□□□ 1.7
KHDC1-207ENST00000610435 NLGN2Q8NFZ4 835 aa25.69■■□□□ 1.7
KHDC1-207ENST00000610435 CARD14Q9BXL6 1004 aa25.69■■□□□ 1.7
KHDC1-207ENST00000610435 EMILIN1Q9Y6C2 1016 aa25.69■■□□□ 1.7
KHDC1-207ENST00000610435 NCAPD2Q15021 1401 aa25.69■■□□□ 1.7
KHDC1-207ENST00000610435 MAP2P11137 1827 aaKnown RBP25.68■■□□□ 1.7
KHDC1-207ENST00000610435 HMGB2P26583 209 aaKnown RBP25.68■■□□□ 1.7
KHDC1-207ENST00000610435 CYP27B1O15528 508 aa25.67■■□□□ 1.7
KHDC1-207ENST00000610435 C4BP0C0L5 1744 aa25.67■■□□□ 1.7
KHDC1-207ENST00000610435 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
KHDC1-207ENST00000610435 MSL1Q68DK7 614 aa25.64■■□□□ 1.7
KHDC1-207ENST00000610435 PPM1GO15355 546 aaPredicted RBP25.63■■□□□ 1.69
KHDC1-207ENST00000610435 FLAD1Q8NFF5 587 aa25.63■■□□□ 1.69
KHDC1-207ENST00000610435 SMARCC1Q92922 1105 aaPredicted RBP25.63■■□□□ 1.69
KHDC1-207ENST00000610435 UBR3Q6ZT12 1888 aa25.63■■□□□ 1.69
KHDC1-207ENST00000610435 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
KHDC1-207ENST00000610435 SPG7Q9UQ90 795 aa25.6■■□□□ 1.69
KHDC1-207ENST00000610435 WASHC2AQ641Q2 1341 aa25.6■■□□□ 1.69
KHDC1-207ENST00000610435 GOLGB1Q14789 3259 aaKnown RBP25.59■■□□□ 1.69
KHDC1-207ENST00000610435 AK7Q96M32 723 aa25.59■■□□□ 1.69
KHDC1-207ENST00000610435 YBX3P16989 372 aaKnown RBP eCLIP25.58■■□□□ 1.69
KHDC1-207ENST00000610435 C1QTNF8P60827 252 aa25.58■■□□□ 1.69
KHDC1-207ENST00000610435 NKX1-1Q15270 411 aaPredicted RBP25.58■■□□□ 1.69
KHDC1-207ENST00000610435 GRIN3BO60391 1043 aa25.57■■□□□ 1.68
KHDC1-207ENST00000610435 PIGBQ92521 554 aa25.57■■□□□ 1.68
KHDC1-207ENST00000610435 EYA1Q99502 592 aa25.56■■□□□ 1.68
KHDC1-207ENST00000610435 SENP3-EIF4A1A0A087X0R7 540 aa25.55■■□□□ 1.68
KHDC1-207ENST00000610435 CD2APQ9Y5K6 639 aa25.55■■□□□ 1.68
KHDC1-207ENST00000610435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.54■■□□□ 1.68
KHDC1-207ENST00000610435 GIGYF1O75420 1035 aaPredicted RBP25.53■■□□□ 1.68
KHDC1-207ENST00000610435 POLKQ9UBT6 870 aa25.53■■□□□ 1.68
KHDC1-207ENST00000610435 PHF14O94880 888 aa25.52■■□□□ 1.68
KHDC1-207ENST00000610435 AMIGO3Q86WK7 504 aa25.52■■□□□ 1.68
KHDC1-207ENST00000610435 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
KHDC1-207ENST00000610435 TMOD3Q9NYL9 352 aa25.52■■□□□ 1.68
KHDC1-207ENST00000610435 LOC102724428A0A0B4J2F2 783 aa25.51■■□□□ 1.67
KHDC1-207ENST00000610435 SIK1P57059 783 aa25.51■■□□□ 1.67
KHDC1-207ENST00000610435 CLSPNQ9HAW4 1339 aa25.51■■□□□ 1.67
KHDC1-207ENST00000610435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.5■■□□□ 1.67
KHDC1-207ENST00000610435 PHKG2P15735 406 aa25.5■■□□□ 1.67
KHDC1-207ENST00000610435 IFNL2Q8IZJ0 200 aa25.5■■□□□ 1.67
KHDC1-207ENST00000610435 PLEKHG2Q9H7P9 1386 aa25.49■■□□□ 1.67
KHDC1-207ENST00000610435 SSFA2P28290 1259 aa25.49■■□□□ 1.67
KHDC1-207ENST00000610435 LINC00116Q8NCU8 138 aa25.49■■□□□ 1.67
KHDC1-207ENST00000610435 EIF4A2Q14240 407 aaKnown RBP25.48■■□□□ 1.67
KHDC1-207ENST00000610435 TNNT2P45379 298 aaPredicted RBP25.47■■□□□ 1.67
KHDC1-207ENST00000610435 SMIM5Q71RC9 77 aa25.47■■□□□ 1.67
KHDC1-207ENST00000610435 ASAP1Q9ULH1 1129 aa25.46■■□□□ 1.67
KHDC1-207ENST00000610435 GNPATO15228 680 aa25.44■■□□□ 1.66
KHDC1-207ENST00000610435 ATP6V1AP38606 617 aa25.44■■□□□ 1.66
KHDC1-207ENST00000610435 ITPK1Q13572 414 aa25.44■■□□□ 1.66
KHDC1-207ENST00000610435 ZNF831Q5JPB2 1677 aa25.44■■□□□ 1.66
KHDC1-207ENST00000610435 ATP10DQ9P241 1426 aa25.44■■□□□ 1.66
KHDC1-207ENST00000610435 IGSF1Q8N6C5 1336 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms