RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.78
MUC1-221ENST00000610359 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
MUC1-221ENST00000610359 NSD2O96028 1365 aa10.14□□□□□ -0.79
MUC1-221ENST00000610359 N4BP2Q86UW6 1770 aaPredicted RBP10.14□□□□□ -0.79
MUC1-221ENST00000610359 IGSF1Q8N6C5 1336 aa10.14□□□□□ -0.79
MUC1-221ENST00000610359 KIAA1551Q9HCM1 1747 aa10.14□□□□□ -0.79
MUC1-221ENST00000610359 KIAA1210Q9ULL0 1709 aa10.14□□□□□ -0.79
MUC1-221ENST00000610359 SRPK2P78362 688 aaKnown RBP10.14□□□□□ -0.79
MUC1-221ENST00000610359 TOGARAM1Q9Y4F4 1720 aa10.13□□□□□ -0.79
MUC1-221ENST00000610359 KCNH5Q8NCM2 988 aa10.13□□□□□ -0.79
MUC1-221ENST00000610359 NMRK2Q9NPI5 230 aa10.13□□□□□ -0.79
MUC1-221ENST00000610359 UBR3Q6ZT12 1888 aa10.13□□□□□ -0.79
MUC1-221ENST00000610359 KIF13BQ9NQT8 1826 aa10.12□□□□□ -0.79
MUC1-221ENST00000610359 ERBB3P21860 1342 aa10.12□□□□□ -0.79
MUC1-221ENST00000610359 RGPD2P0DJD1 1756 aa10.12□□□□□ -0.79
MUC1-221ENST00000610359 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
MUC1-221ENST00000610359 TTC21BQ7Z4L5 1316 aa10.11□□□□□ -0.79
MUC1-221ENST00000610359 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
MUC1-221ENST00000610359 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
MUC1-221ENST00000610359 RBM46Q8TBY0 533 aaKnown RBP10.11□□□□□ -0.79
MUC1-221ENST00000610359 CCNL1Q9UK58 526 aaPredicted RBP10.11□□□□□ -0.79
MUC1-221ENST00000610359 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
MUC1-221ENST00000610359 ANKRD36BQ8N2N9 1353 aa10.1□□□□□ -0.79
MUC1-221ENST00000610359 PKD1L3Q7Z443 1732 aa10.1□□□□□ -0.79
MUC1-221ENST00000610359 SBF1O95248 1867 aa10.09□□□□□ -0.79
MUC1-221ENST00000610359 AMIGO3Q86WK7 504 aa10.09□□□□□ -0.79
MUC1-221ENST00000610359 SYTL4Q96C24 671 aaPredicted RBP10.09□□□□□ -0.79
MUC1-221ENST00000610359 STAC3Q96MF2 364 aa10.09□□□□□ -0.79
MUC1-221ENST00000610359 MON2Q7Z3U7 1717 aa10.09□□□□□ -0.79
MUC1-221ENST00000610359 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
MUC1-221ENST00000610359 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
MUC1-221ENST00000610359 NBPF1Q3BBV0 1214 aa10.08□□□□□ -0.8
MUC1-221ENST00000610359 ANKRD24Q8TF21 1146 aa10.08□□□□□ -0.8
MUC1-221ENST00000610359 FAM208AQ9UK61 1670 aaKnown RBP10.08□□□□□ -0.8
MUC1-221ENST00000610359 C4BP0C0L5 1744 aa10.07□□□□□ -0.8
MUC1-221ENST00000610359 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
MUC1-221ENST00000610359 FSTL1Q12841 308 aa10.07□□□□□ -0.8
MUC1-221ENST00000610359 SMIM5Q71RC9 77 aa10.07□□□□□ -0.8
MUC1-221ENST00000610359 ITGB4P16144 1822 aa10.07□□□□□ -0.8
MUC1-221ENST00000610359 TTC21AQ8NDW8 1320 aa10.07□□□□□ -0.8
MUC1-221ENST00000610359 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
MUC1-221ENST00000610359 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
MUC1-221ENST00000610359 PXDNLA1KZ92 1463 aa10.05□□□□□ -0.8
MUC1-221ENST00000610359 ZNF692Q9BU19 519 aaPredicted RBP10.05□□□□□ -0.8
MUC1-221ENST00000610359 USP47Q96K76 1375 aa10.04□□□□□ -0.8
MUC1-221ENST00000610359 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
MUC1-221ENST00000610359 FLAD1Q8NFF5 587 aa10.04□□□□□ -0.8
MUC1-221ENST00000610359 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
MUC1-221ENST00000610359 MAP2P11137 1827 aaKnown RBP10.04□□□□□ -0.8
MUC1-221ENST00000610359 USP31Q70CQ4 1352 aa10.03□□□□□ -0.8
MUC1-221ENST00000610359 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
MUC1-221ENST00000610359 CCDC88AQ3V6T2 1871 aa10.02□□□□□ -0.8
MUC1-221ENST00000610359 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
MUC1-221ENST00000610359 ARHGAP27Q6ZUM4 889 aa10.02□□□□□ -0.81
MUC1-221ENST00000610359 MEGF6O75095 1541 aa10.02□□□□□ -0.81
MUC1-221ENST00000610359 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
MUC1-221ENST00000610359 PHF14O94880 888 aa10.01□□□□□ -0.81
MUC1-221ENST00000610359 C9orf131Q5VYM1 1079 aa10.01□□□□□ -0.81
MUC1-221ENST00000610359 NME9Q86XW9 330 aa10.01□□□□□ -0.81
MUC1-221ENST00000610359 RRAGCQ9HB90 399 aa10.01□□□□□ -0.81
MUC1-221ENST00000610359 BCS1LQ9Y276 419 aa10.01□□□□□ -0.81
MUC1-221ENST00000610359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
MUC1-221ENST00000610359 A0A0G2JLW4 131 aa10□□□□□ -0.81
MUC1-221ENST00000610359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10□□□□□ -0.81
MUC1-221ENST00000610359 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
MUC1-221ENST00000610359 LTV1Q96GA3 475 aaPredicted RBP10□□□□□ -0.81
MUC1-221ENST00000610359 PALLDQ8WX93 1383 aa10□□□□□ -0.81
MUC1-221ENST00000610359 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
MUC1-221ENST00000610359 AK7Q96M32 723 aa9.99□□□□□ -0.81
MUC1-221ENST00000610359 EVC2Q86UK5 1308 aa9.99□□□□□ -0.81
MUC1-221ENST00000610359 PLEKHG2Q9H7P9 1386 aa9.99□□□□□ -0.81
MUC1-221ENST00000610359 CD163L1Q9NR16 1453 aa9.98□□□□□ -0.81
MUC1-221ENST00000610359 TGFB2P61812 414 aa9.98□□□□□ -0.81
MUC1-221ENST00000610359 IP6K1Q92551 441 aa9.98□□□□□ -0.81
MUC1-221ENST00000610359 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
MUC1-221ENST00000610359 SBNO2Q9Y2G9 1366 aa9.98□□□□□ -0.81
MUC1-221ENST00000610359 C4AP0C0L4 1744 aa9.97□□□□□ -0.81
MUC1-221ENST00000610359 FCHSD2O94868 740 aa9.97□□□□□ -0.81
MUC1-221ENST00000610359 MMP10P09238 476 aa9.97□□□□□ -0.81
MUC1-221ENST00000610359 DPEP1P16444 411 aa9.97□□□□□ -0.81
MUC1-221ENST00000610359 KDM2BQ8NHM5 1336 aa9.97□□□□□ -0.81
MUC1-221ENST00000610359 KCNA3P22001 575 aa9.96□□□□□ -0.82
MUC1-221ENST00000610359 SSFA2P28290 1259 aa9.96□□□□□ -0.82
MUC1-221ENST00000610359 FAM161AQ3B820 660 aa9.96□□□□□ -0.82
MUC1-221ENST00000610359 LINC00116Q8NCU8 138 aa9.96□□□□□ -0.82
MUC1-221ENST00000610359 VIRMAQ69YN4 1812 aaKnown RBP9.96□□□□□ -0.82
MUC1-221ENST00000610359 FOXN1O15353 648 aa9.95□□□□□ -0.82
MUC1-221ENST00000610359 MPRIPQ6WCQ1 1025 aa9.95□□□□□ -0.82
MUC1-221ENST00000610359 RNF181Q9P0P0 153 aa9.95□□□□□ -0.82
MUC1-221ENST00000610359 NSD3Q9BZ95 1437 aa9.95□□□□□ -0.82
MUC1-221ENST00000610359 PDE4DIPQ5VU43 2346 aa9.94□□□□□ -0.82
MUC1-221ENST00000610359 MYH14Q7Z406 1995 aaKnown RBP9.94□□□□□ -0.82
MUC1-221ENST00000610359 TIAM2Q8IVF5 1701 aa9.93□□□□□ -0.82
MUC1-221ENST00000610359 FBLN1P23142 703 aa9.93□□□□□ -0.82
MUC1-221ENST00000610359 HMGB2P26583 209 aaKnown RBP9.93□□□□□ -0.82
MUC1-221ENST00000610359 HOXC9P31274 260 aa9.93□□□□□ -0.82
MUC1-221ENST00000610359 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
MUC1-221ENST00000610359 DCAF5Q96JK2 942 aa9.93□□□□□ -0.82
MUC1-221ENST00000610359 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
MUC1-221ENST00000610359 PRDM10Q9NQV6 1147 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms