RNA–Protein interactions for RNA: ENST00000610236.1

LINC00649-215, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 196 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-215ENST00000610236 PROM2Q8N271 834 aa18.11■□□□□ 0.49
LINC00649-215ENST00000610236 NUP188Q5SRE5 1749 aa18.11■□□□□ 0.49
LINC00649-215ENST00000610236 NHSQ6T4R5 1651 aa18.1■□□□□ 0.49
LINC00649-215ENST00000610236 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
LINC00649-215ENST00000610236 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
LINC00649-215ENST00000610236 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
LINC00649-215ENST00000610236 NCAPD2Q15021 1401 aa18.08■□□□□ 0.49
LINC00649-215ENST00000610236 MORC1Q86VD1 984 aa18.08■□□□□ 0.48
LINC00649-215ENST00000610236 RGPD2P0DJD1 1756 aa18.08■□□□□ 0.48
LINC00649-215ENST00000610236 LRP5O75197 1615 aa18.07■□□□□ 0.48
LINC00649-215ENST00000610236 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
LINC00649-215ENST00000610236 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
LINC00649-215ENST00000610236 EYA1Q99502 592 aa18.06■□□□□ 0.48
LINC00649-215ENST00000610236 EIF4A2Q14240 407 aaKnown RBP18.05■□□□□ 0.48
LINC00649-215ENST00000610236 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
LINC00649-215ENST00000610236 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
LINC00649-215ENST00000610236 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
LINC00649-215ENST00000610236 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
LINC00649-215ENST00000610236 SYTL4Q96C24 671 aaPredicted RBP18.03■□□□□ 0.48
LINC00649-215ENST00000610236 STK32BQ9NY57 414 aa18.03■□□□□ 0.48
LINC00649-215ENST00000610236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC00649-215ENST00000610236 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
LINC00649-215ENST00000610236 PER1O15534 1290 aaPredicted RBP18.02■□□□□ 0.48
LINC00649-215ENST00000610236 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.48
LINC00649-215ENST00000610236 SPG7Q9UQ90 795 aa18.02■□□□□ 0.48
LINC00649-215ENST00000610236 CYP27B1O15528 508 aa18.01■□□□□ 0.47
LINC00649-215ENST00000610236 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
LINC00649-215ENST00000610236 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
LINC00649-215ENST00000610236 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
LINC00649-215ENST00000610236 BTAF1O14981 1849 aa18■□□□□ 0.47
LINC00649-215ENST00000610236 SPON1Q9HCB6 807 aa17.99■□□□□ 0.47
LINC00649-215ENST00000610236 NKX1-1Q15270 411 aaPredicted RBP17.98■□□□□ 0.47
LINC00649-215ENST00000610236 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
LINC00649-215ENST00000610236 NPC1L1Q9UHC9 1359 aa17.98■□□□□ 0.47
LINC00649-215ENST00000610236 KAT6BQ8WYB5 2073 aa17.97■□□□□ 0.47
LINC00649-215ENST00000610236 DOT1LQ8TEK3 1739 aa17.97■□□□□ 0.47
LINC00649-215ENST00000610236 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
LINC00649-215ENST00000610236 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
LINC00649-215ENST00000610236 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
LINC00649-215ENST00000610236 PHKG2P15735 406 aa17.94■□□□□ 0.46
LINC00649-215ENST00000610236 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
LINC00649-215ENST00000610236 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
LINC00649-215ENST00000610236 IL13P35225 146 aa17.93■□□□□ 0.46
LINC00649-215ENST00000610236 MTHFSP49914 203 aa17.93■□□□□ 0.46
LINC00649-215ENST00000610236 ZNF827Q17R98 1081 aa17.93■□□□□ 0.46
LINC00649-215ENST00000610236 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
LINC00649-215ENST00000610236 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
LINC00649-215ENST00000610236 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
LINC00649-215ENST00000610236 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
LINC00649-215ENST00000610236 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
LINC00649-215ENST00000610236 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
LINC00649-215ENST00000610236 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
LINC00649-215ENST00000610236 SMARCC1Q92922 1105 aaPredicted RBP17.91■□□□□ 0.46
LINC00649-215ENST00000610236 PPP1R1BQ9UD71 204 aaPredicted RBP17.91■□□□□ 0.46
LINC00649-215ENST00000610236 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
LINC00649-215ENST00000610236 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
LINC00649-215ENST00000610236 MTFR1LQ9H019 292 aa17.9■□□□□ 0.46
LINC00649-215ENST00000610236 KDRP35968 1356 aa17.9■□□□□ 0.46
LINC00649-215ENST00000610236 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
LINC00649-215ENST00000610236 SULT6B1Q6IMI4 303 aa17.89■□□□□ 0.45
LINC00649-215ENST00000610236 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
LINC00649-215ENST00000610236 PIGBQ92521 554 aa17.89■□□□□ 0.45
LINC00649-215ENST00000610236 LY75O60449 1722 aa17.89■□□□□ 0.45
LINC00649-215ENST00000610236 KCNQ4P56696 695 aa17.88■□□□□ 0.45
LINC00649-215ENST00000610236 TMOD3Q9NYL9 352 aa17.88■□□□□ 0.45
LINC00649-215ENST00000610236 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
LINC00649-215ENST00000610236 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
LINC00649-215ENST00000610236 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
LINC00649-215ENST00000610236 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
LINC00649-215ENST00000610236 TOGARAM1Q9Y4F4 1720 aa17.86■□□□□ 0.45
LINC00649-215ENST00000610236 ERVV-2B6SEH9 535 aa17.86■□□□□ 0.45
LINC00649-215ENST00000610236 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
LINC00649-215ENST00000610236 PTGER2P43116 358 aa17.86■□□□□ 0.45
LINC00649-215ENST00000610236 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
LINC00649-215ENST00000610236 PNPLA7Q6ZV29 1317 aa17.85■□□□□ 0.45
LINC00649-215ENST00000610236 C1orf141Q5JVX7 400 aa17.84■□□□□ 0.45
LINC00649-215ENST00000610236 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
LINC00649-215ENST00000610236 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
LINC00649-215ENST00000610236 LOC102724428A0A0B4J2F2 783 aa17.82■□□□□ 0.44
LINC00649-215ENST00000610236 SIK1P57059 783 aa17.82■□□□□ 0.44
LINC00649-215ENST00000610236 ITGB4P16144 1822 aa17.82■□□□□ 0.44
LINC00649-215ENST00000610236 FLAD1Q8NFF5 587 aa17.81■□□□□ 0.44
LINC00649-215ENST00000610236 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
LINC00649-215ENST00000610236 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
LINC00649-215ENST00000610236 QSER1Q2KHR3 1735 aa17.81■□□□□ 0.44
LINC00649-215ENST00000610236 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
LINC00649-215ENST00000610236 HMOX1P09601 288 aa17.8■□□□□ 0.44
LINC00649-215ENST00000610236 CABP4P57796 275 aa17.8■□□□□ 0.44
LINC00649-215ENST00000610236 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
LINC00649-215ENST00000610236 COL3A1P02461 1466 aaPredicted RBP17.8■□□□□ 0.44
LINC00649-215ENST00000610236 CFAP53Q96M91 514 aa17.79■□□□□ 0.44
LINC00649-215ENST00000610236 COL23A1Q86Y22 540 aaPredicted RBP17.78■□□□□ 0.44
LINC00649-215ENST00000610236 AK7Q96M32 723 aa17.78■□□□□ 0.44
LINC00649-215ENST00000610236 ARXQ96QS3 562 aa17.78■□□□□ 0.44
LINC00649-215ENST00000610236 POLD1P28340 1107 aa17.77■□□□□ 0.44
LINC00649-215ENST00000610236 ATP6V1AP38606 617 aa17.77■□□□□ 0.44
LINC00649-215ENST00000610236 C5P01031 1676 aa17.77■□□□□ 0.43
LINC00649-215ENST00000610236 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
LINC00649-215ENST00000610236 MSH5O43196 834 aa17.76■□□□□ 0.43
LINC00649-215ENST00000610236 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms