RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 HTATSF1O43719 755 aaKnown RBP29.32■■■□□ 2.28
COMMD7-204ENST00000610160 CHRNA2Q15822 529 aa29.32■■■□□ 2.28
COMMD7-204ENST00000610160 C20orf194Q5TEA3 1177 aa29.32■■■□□ 2.28
COMMD7-204ENST00000610160 GNAT3A8MTJ3 354 aa29.3■■■□□ 2.28
COMMD7-204ENST00000610160 HAP1P54257 671 aaPredicted RBP29.29■■■□□ 2.28
COMMD7-204ENST00000610160 CRBNQ96SW2 442 aa29.28■■■□□ 2.28
COMMD7-204ENST00000610160 BCL2L13Q9BXK5 485 aa29.28■■■□□ 2.28
COMMD7-204ENST00000610160 PRDM11Q9NQV5 511 aa29.28■■■□□ 2.28
COMMD7-204ENST00000610160 B4GALNT3Q6L9W6 998 aa29.27■■■□□ 2.28
COMMD7-204ENST00000610160 CHL1O00533 1208 aa29.26■■■□□ 2.28
COMMD7-204ENST00000610160 COL22A1Q8NFW1 1626 aaPredicted RBP29.26■■■□□ 2.27
COMMD7-204ENST00000610160 CANXP27824 592 aaKnown RBP29.25■■■□□ 2.27
COMMD7-204ENST00000610160 ZNF428Q96B54 188 aa29.25■■■□□ 2.27
COMMD7-204ENST00000610160 PLEKHO1Q53GL0 409 aaPredicted RBP29.24■■■□□ 2.27
COMMD7-204ENST00000610160 NLRP2Q9NX02 1062 aa29.24■■■□□ 2.27
COMMD7-204ENST00000610160 CSB-PGBD3P0DP91 1061 aa29.24■■■□□ 2.27
COMMD7-204ENST00000610160 AMOTQ4VCS5 1084 aa29.24■■■□□ 2.27
COMMD7-204ENST00000610160 PDE3AQ14432 1141 aa29.23■■■□□ 2.27
COMMD7-204ENST00000610160 FRAT1Q92837 279 aaPredicted RBP29.23■■■□□ 2.27
COMMD7-204ENST00000610160 SMC4Q9NTJ3 1288 aa29.23■■■□□ 2.27
COMMD7-204ENST00000610160 SSH1Q8WYL5 1049 aa29.22■■■□□ 2.27
COMMD7-204ENST00000610160 PHLPP1O60346 1717 aa29.22■■■□□ 2.27
COMMD7-204ENST00000610160 ALDH1L2Q3SY69 923 aa29.21■■■□□ 2.27
COMMD7-204ENST00000610160 CCDC136Q96JN2 1154 aa29.21■■■□□ 2.27
COMMD7-204ENST00000610160 COL5A2P05997 1499 aaPredicted RBP29.21■■■□□ 2.27
COMMD7-204ENST00000610160 TSPYL6Q8N831 410 aa29.21■■■□□ 2.27
COMMD7-204ENST00000610160 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.27
COMMD7-204ENST00000610160 VAMP4O75379 141 aa29.2■■■□□ 2.26
COMMD7-204ENST00000610160 ZNF530Q6P9A1 599 aaPredicted RBP29.2■■■□□ 2.26
COMMD7-204ENST00000610160 IL17REQ8NFR9 667 aa29.2■■■□□ 2.26
COMMD7-204ENST00000610160 PLEKHG2Q9H7P9 1386 aa29.19■■■□□ 2.26
COMMD7-204ENST00000610160 CEMIPQ8WUJ3 1361 aa29.19■■■□□ 2.26
COMMD7-204ENST00000610160 TWISTNBQ3B726 338 aaPredicted RBP29.19■■■□□ 2.26
COMMD7-204ENST00000610160 PELP1Q8IZL8 1130 aaKnown RBP29.19■■■□□ 2.26
COMMD7-204ENST00000610160 VIRMAQ69YN4 1812 aaKnown RBP29.18■■■□□ 2.26
COMMD7-204ENST00000610160 AKAP4Q5JQC9 854 aa29.18■■■□□ 2.26
COMMD7-204ENST00000610160 C8orf58Q8NAV2 365 aa29.18■■■□□ 2.26
COMMD7-204ENST00000610160 MEGF6O75095 1541 aa29.18■■■□□ 2.26
COMMD7-204ENST00000610160 TOM1O60784 492 aa29.17■■■□□ 2.26
COMMD7-204ENST00000610160 RAPGEF4Q8WZA2 1011 aa29.17■■■□□ 2.26
COMMD7-204ENST00000610160 WDR17Q8IZU2 1322 aa29.17■■■□□ 2.26
COMMD7-204ENST00000610160 TSPYL4Q9UJ04 414 aa29.16■■■□□ 2.26
COMMD7-204ENST00000610160 KIF16BQ96L93 1317 aa29.15■■■□□ 2.26
COMMD7-204ENST00000610160 ZKSCAN2Q63HK3 967 aa29.15■■■□□ 2.26
COMMD7-204ENST00000610160 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.26
COMMD7-204ENST00000610160 ELL2O00472 640 aaPredicted RBP29.14■■■□□ 2.26
COMMD7-204ENST00000610160 C1orf141Q5JVX7 400 aa29.14■■■□□ 2.26
COMMD7-204ENST00000610160 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
COMMD7-204ENST00000610160 TATP17735 454 aaPredicted RBP29.13■■■□□ 2.25
COMMD7-204ENST00000610160 BRPF1P55201 1214 aaPredicted RBP29.13■■■□□ 2.25
COMMD7-204ENST00000610160 MIS18AQ9NYP9 233 aa29.13■■■□□ 2.25
COMMD7-204ENST00000610160 ADAMTS7Q9UKP4 1686 aa29.13■■■□□ 2.25
COMMD7-204ENST00000610160 PANK1Q8TE04 598 aa29.13■■■□□ 2.25
COMMD7-204ENST00000610160 BABAM1Q9NWV8 329 aa29.12■■■□□ 2.25
COMMD7-204ENST00000610160 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
COMMD7-204ENST00000610160 PARP4Q9UKK3 1724 aaKnown RBP29.12■■■□□ 2.25
COMMD7-204ENST00000610160 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
COMMD7-204ENST00000610160 TAF7Q15545 349 aaPredicted RBP29.1■■■□□ 2.25
COMMD7-204ENST00000610160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.1■■■□□ 2.25
COMMD7-204ENST00000610160 TNNQ9UQP3 1299 aa29.1■■■□□ 2.25
COMMD7-204ENST00000610160 KRT24Q2M2I5 525 aa29.1■■■□□ 2.25
COMMD7-204ENST00000610160 LGR6Q9HBX8 967 aa29.1■■■□□ 2.25
COMMD7-204ENST00000610160 PIP4K2BP78356 416 aa29.09■■■□□ 2.25
COMMD7-204ENST00000610160 NOB1Q9ULX3 412 aaKnown RBP29.09■■■□□ 2.25
COMMD7-204ENST00000610160 KDM3BQ7LBC6 1761 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 MS4A1P11836 297 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 RLBP1P12271 317 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 TOM1L2Q6ZVM7 507 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 TRIM27P14373 513 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 ATF7IPQ6VMQ6 1270 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 MRPL50Q8N5N7 158 aaKnown RBP29.08■■■□□ 2.25
COMMD7-204ENST00000610160 SPG7Q9UQ90 795 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 COG6Q9Y2V7 657 aa29.08■■■□□ 2.25
COMMD7-204ENST00000610160 MPRIPQ6WCQ1 1025 aa29.07■■■□□ 2.24
COMMD7-204ENST00000610160 IPO8O15397 1037 aaKnown RBP29.06■■■□□ 2.24
COMMD7-204ENST00000610160 CLUAP1Q96AJ1 413 aa29.06■■■□□ 2.24
COMMD7-204ENST00000610160 RNMTO43148 476 aaKnown RBP29.06■■■□□ 2.24
COMMD7-204ENST00000610160 FTSJ3Q8IY81 847 aaKnown RBP29.06■■■□□ 2.24
COMMD7-204ENST00000610160 DZIP1LQ8IYY4 767 aaKnown RBP29.06■■■□□ 2.24
COMMD7-204ENST00000610160 SIPA1L3O60292 1781 aaPredicted RBP29.06■■■□□ 2.24
COMMD7-204ENST00000610160 SCN11AQ9UI33 1791 aa29.05■■■□□ 2.24
COMMD7-204ENST00000610160 UBAP1LF5GYI3 381 aa29.04■■■□□ 2.24
COMMD7-204ENST00000610160 CARD10Q9BWT7 1032 aa29.04■■■□□ 2.24
COMMD7-204ENST00000610160 STRN4Q9NRL3 753 aa29.04■■■□□ 2.24
COMMD7-204ENST00000610160 TEFQ10587 303 aa29.03■■■□□ 2.24
COMMD7-204ENST00000610160 EVA1CP58658 441 aa29.02■■■□□ 2.24
COMMD7-204ENST00000610160 LARP1Q6PKG0 1096 aaKnown RBP29.02■■■□□ 2.24
COMMD7-204ENST00000610160 PHKG2P15735 406 aa29.01■■■□□ 2.23
COMMD7-204ENST00000610160 TCERG1O14776 1098 aaKnown RBP29.01■■■□□ 2.23
COMMD7-204ENST00000610160 ARHGAP45Q92619 1136 aa29.01■■■□□ 2.23
COMMD7-204ENST00000610160 BTG4Q9NY30 223 aa29.01■■■□□ 2.23
COMMD7-204ENST00000610160 KDM6AO15550 1401 aaPredicted RBP29■■■□□ 2.23
COMMD7-204ENST00000610160 MVPQ14764 893 aaKnown RBP29■■■□□ 2.23
COMMD7-204ENST00000610160 IFNL2Q8IZJ0 200 aa28.99■■■□□ 2.23
COMMD7-204ENST00000610160 SOS1Q07889 1333 aaPredicted RBP28.99■■■□□ 2.23
COMMD7-204ENST00000610160 PLCH1Q4KWH8 1693 aa28.99■■■□□ 2.23
COMMD7-204ENST00000610160 AAMPQ13685 434 aa28.99■■■□□ 2.23
COMMD7-204ENST00000610160 CYP27B1O15528 508 aa28.96■■■□□ 2.23
COMMD7-204ENST00000610160 SHANK3Q9BYB0 1731 aa28.95■■■□□ 2.23
COMMD7-204ENST00000610160 BTBD11A6QL63 1104 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms