RNA–Protein interactions for RNA: ENST00000610023.1

PDE4C-217, Transcript of phosphodiesterase 4C, humanhuman

TSL 4

Gene PDE4C, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-217ENST00000610023 TATP17735 454 aaPredicted RBP29.1■■■□□ 2.25
PDE4C-217ENST00000610023 ZCRB1Q8TBF4 217 aaKnown RBP29.1■■■□□ 2.25
PDE4C-217ENST00000610023 PKD1L3Q7Z443 1732 aa29.1■■■□□ 2.25
PDE4C-217ENST00000610023 PTF1AQ7RTS3 328 aa29.09■■■□□ 2.25
PDE4C-217ENST00000610023 DDX54Q8TDD1 881 aaKnown RBP29.09■■■□□ 2.25
PDE4C-217ENST00000610023 PER1O15534 1290 aaPredicted RBP29.08■■■□□ 2.25
PDE4C-217ENST00000610023 ACSBG1Q96GR2 724 aa29.08■■■□□ 2.25
PDE4C-217ENST00000610023 BTAF1O14981 1849 aa29.08■■■□□ 2.25
PDE4C-217ENST00000610023 PLSCR1O15162 318 aa29.07■■■□□ 2.24
PDE4C-217ENST00000610023 EIF4A2Q14240 407 aaKnown RBP29.06■■■□□ 2.24
PDE4C-217ENST00000610023 KCNQ2O43526 872 aa29.05■■■□□ 2.24
PDE4C-217ENST00000610023 EYA1Q99502 592 aa29.05■■■□□ 2.24
PDE4C-217ENST00000610023 KAT6BQ8WYB5 2073 aa29.05■■■□□ 2.24
PDE4C-217ENST00000610023 NPC1L1Q9UHC9 1359 aa29.04■■■□□ 2.24
PDE4C-217ENST00000610023 PCDH11XQ9BZA7 1347 aa29.03■■■□□ 2.24
PDE4C-217ENST00000610023 PCDH11YQ9BZA8 1340 aa29.03■■■□□ 2.24
PDE4C-217ENST00000610023 PSDA5PKW4 1024 aaPredicted RBP29.02■■■□□ 2.24
PDE4C-217ENST00000610023 CC2D1BQ5T0F9 858 aaKnown RBP29.01■■■□□ 2.23
PDE4C-217ENST00000610023 IGSF1Q8N6C5 1336 aa28.99■■■□□ 2.23
PDE4C-217ENST00000610023 R3HDM1Q15032 1099 aaKnown RBP28.98■■■□□ 2.23
PDE4C-217ENST00000610023 PLEKHG2Q9H7P9 1386 aa28.98■■■□□ 2.23
PDE4C-217ENST00000610023 NBPF14Q5TI25 921 aa28.97■■■□□ 2.23
PDE4C-217ENST00000610023 LRP5O75197 1615 aa28.95■■■□□ 2.23
PDE4C-217ENST00000610023 TOGARAM1Q9Y4F4 1720 aa28.94■■■□□ 2.22
PDE4C-217ENST00000610023 SRCAPQ6ZRS2 3230 aa28.94■■■□□ 2.22
PDE4C-217ENST00000610023 TXNRD1Q16881 649 aa28.94■■■□□ 2.22
PDE4C-217ENST00000610023 SYTL4Q96C24 671 aaPredicted RBP28.94■■■□□ 2.22
PDE4C-217ENST00000610023 SPG7Q9UQ90 795 aa28.94■■■□□ 2.22
PDE4C-217ENST00000610023 CYP27B1O15528 508 aa28.92■■■□□ 2.22
PDE4C-217ENST00000610023 PRIM1P49642 420 aaKnown RBP28.91■■■□□ 2.22
PDE4C-217ENST00000610023 MTHFSP49914 203 aa28.91■■■□□ 2.22
PDE4C-217ENST00000610023 CNGB1Q14028 1251 aaPredicted RBP28.91■■■□□ 2.22
PDE4C-217ENST00000610023 PROM2Q8N271 834 aa28.91■■■□□ 2.22
PDE4C-217ENST00000610023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.91■■■□□ 2.22
PDE4C-217ENST00000610023 PAPPAQ13219 1627 aa28.9■■■□□ 2.22
PDE4C-217ENST00000610023 ANO8Q9HCE9 1232 aaPredicted RBP28.89■■■□□ 2.22
PDE4C-217ENST00000610023 LY75O60449 1722 aa28.88■■■□□ 2.21
PDE4C-217ENST00000610023 IL13P35225 146 aa28.87■■■□□ 2.21
PDE4C-217ENST00000610023 ITGB4P16144 1822 aa28.87■■■□□ 2.21
PDE4C-217ENST00000610023 KDRP35968 1356 aa28.85■■■□□ 2.21
PDE4C-217ENST00000610023 COL3A1P02461 1466 aaPredicted RBP28.85■■■□□ 2.21
PDE4C-217ENST00000610023 AEBP1Q8IUX7 1158 aa28.83■■■□□ 2.21
PDE4C-217ENST00000610023 PHKG2P15735 406 aa28.82■■■□□ 2.2
PDE4C-217ENST00000610023 NKX1-1Q15270 411 aaPredicted RBP28.82■■■□□ 2.2
PDE4C-217ENST00000610023 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
PDE4C-217ENST00000610023 STK32BQ9NY57 414 aa28.82■■■□□ 2.2
PDE4C-217ENST00000610023 CASZ1Q86V15 1759 aa28.82■■■□□ 2.2
PDE4C-217ENST00000610023 SULT6B1Q6IMI4 303 aa28.81■■■□□ 2.2
PDE4C-217ENST00000610023 DIAPH1O60610 1272 aaKnown RBP28.79■■■□□ 2.2
PDE4C-217ENST00000610023 PLEKHO1Q53GL0 409 aaPredicted RBP28.79■■■□□ 2.2
PDE4C-217ENST00000610023 SLC27A3Q5K4L6 730 aa28.79■■■□□ 2.2
PDE4C-217ENST00000610023 AMOTQ4VCS5 1084 aa28.78■■■□□ 2.2
PDE4C-217ENST00000610023 SLC15A2Q16348 729 aa28.77■■■□□ 2.2
PDE4C-217ENST00000610023 MPRIPQ6WCQ1 1025 aa28.77■■■□□ 2.2
PDE4C-217ENST00000610023 LRRC4BQ9NT99 713 aa28.77■■■□□ 2.2
PDE4C-217ENST00000610023 ZNF530Q6P9A1 599 aaPredicted RBP28.76■■■□□ 2.19
PDE4C-217ENST00000610023 PALLDQ8WX93 1383 aa28.75■■■□□ 2.19
PDE4C-217ENST00000610023 QSER1Q2KHR3 1735 aa28.74■■■□□ 2.19
PDE4C-217ENST00000610023 HSP90AB1P08238 724 aaKnown RBP28.73■■■□□ 2.19
PDE4C-217ENST00000610023 C5P01031 1676 aa28.73■■■□□ 2.19
PDE4C-217ENST00000610023 HMOX1P09601 288 aa28.72■■■□□ 2.19
PDE4C-217ENST00000610023 CFAP53Q96M91 514 aa28.72■■■□□ 2.19
PDE4C-217ENST00000610023 TMOD3Q9NYL9 352 aa28.72■■■□□ 2.19
PDE4C-217ENST00000610023 CCNL1Q9UK58 526 aaPredicted RBP28.72■■■□□ 2.19
PDE4C-217ENST00000610023 KDM6AO15550 1401 aaPredicted RBP28.71■■■□□ 2.19
PDE4C-217ENST00000610023 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
PDE4C-217ENST00000610023 ZNF827Q17R98 1081 aa28.71■■■□□ 2.19
PDE4C-217ENST00000610023 C1orf141Q5JVX7 400 aa28.71■■■□□ 2.19
PDE4C-217ENST00000610023 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
PDE4C-217ENST00000610023 PPP2R1AP30153 589 aa28.7■■■□□ 2.18
PDE4C-217ENST00000610023 PIGBQ92521 554 aa28.7■■■□□ 2.18
PDE4C-217ENST00000610023 SMARCC1Q92922 1105 aaPredicted RBP28.7■■■□□ 2.18
PDE4C-217ENST00000610023 DCAF5Q96JK2 942 aa28.69■■■□□ 2.18
PDE4C-217ENST00000610023 TAF1LQ8IZX4 1826 aa28.69■■■□□ 2.18
PDE4C-217ENST00000610023 U2SURPO15042 1029 aaKnown RBP28.68■■■□□ 2.18
PDE4C-217ENST00000610023 KCNQ4P56696 695 aa28.68■■■□□ 2.18
PDE4C-217ENST00000610023 SCN11AQ9UI33 1791 aa28.67■■■□□ 2.18
PDE4C-217ENST00000610023 AKT1S1Q96B36 256 aa28.66■■■□□ 2.18
PDE4C-217ENST00000610023 SPON1Q9HCB6 807 aa28.66■■■□□ 2.18
PDE4C-217ENST00000610023 ERVV-2B6SEH9 535 aa28.65■■■□□ 2.18
PDE4C-217ENST00000610023 PDGFDQ9GZP0 370 aaPredicted RBP28.65■■■□□ 2.18
PDE4C-217ENST00000610023 VIRMAQ69YN4 1812 aaKnown RBP28.64■■■□□ 2.17
PDE4C-217ENST00000610023 AKAP4Q5JQC9 854 aa28.62■■■□□ 2.17
PDE4C-217ENST00000610023 C4BP0C0L5 1744 aa28.61■■■□□ 2.17
PDE4C-217ENST00000610023 HMGB2P26583 209 aaKnown RBP28.61■■■□□ 2.17
PDE4C-217ENST00000610023 ZBTB7AO95365 584 aa28.6■■■□□ 2.17
PDE4C-217ENST00000610023 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
PDE4C-217ENST00000610023 ASAP1Q9ULH1 1129 aa28.6■■■□□ 2.17
PDE4C-217ENST00000610023 NUDCQ9Y266 331 aa28.6■■■□□ 2.17
PDE4C-217ENST00000610023 ADAMTS7Q9UKP4 1686 aa28.59■■■□□ 2.17
PDE4C-217ENST00000610023 CABP4P57796 275 aa28.59■■■□□ 2.17
PDE4C-217ENST00000610023 TFCP2L1Q9NZI6 479 aa28.59■■■□□ 2.17
PDE4C-217ENST00000610023 MRC1P22897 1456 aa28.59■■■□□ 2.17
PDE4C-217ENST00000610023 PNPLA7Q6ZV29 1317 aa28.58■■■□□ 2.17
PDE4C-217ENST00000610023 ZNF831Q5JPB2 1677 aa28.58■■■□□ 2.16
PDE4C-217ENST00000610023 LOC102724428A0A0B4J2F2 783 aa28.57■■■□□ 2.16
PDE4C-217ENST00000610023 SIK1P57059 783 aa28.57■■■□□ 2.16
PDE4C-217ENST00000610023 MTHFSDQ2M296 383 aaKnown RBP28.57■■■□□ 2.16
PDE4C-217ENST00000610023 ATG3Q9NT62 314 aa28.57■■■□□ 2.16
PDE4C-217ENST00000610023 MTFR1LQ9H019 292 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms