RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 ADD1P35611 737 aaKnown RBP8.35□□□□□ -1.07
CCDC144B-206ENST00000609959 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
CCDC144B-206ENST00000609959 H7C1W4 665 aa8.34□□□□□ -1.07
CCDC144B-206ENST00000609959 GPC1P35052 558 aa8.34□□□□□ -1.07
CCDC144B-206ENST00000609959 PODNQ7Z5L7 613 aa8.34□□□□□ -1.07
CCDC144B-206ENST00000609959 TRIM22Q8IYM9 498 aa8.34□□□□□ -1.07
CCDC144B-206ENST00000609959 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
CCDC144B-206ENST00000609959 ATP5J2-PTCD1G3V325 749 aa8.33□□□□□ -1.08
CCDC144B-206ENST00000609959 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
CCDC144B-206ENST00000609959 BEND7Q8N7W2 519 aaPredicted RBP8.33□□□□□ -1.08
CCDC144B-206ENST00000609959 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
CCDC144B-206ENST00000609959 RIPOR1Q6ZS17 1223 aa8.32□□□□□ -1.08
CCDC144B-206ENST00000609959 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
CCDC144B-206ENST00000609959 EPS8L1Q8TE68 723 aa8.32□□□□□ -1.08
CCDC144B-206ENST00000609959 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
CCDC144B-206ENST00000609959 KDM4CQ9H3R0 1056 aa8.32□□□□□ -1.08
CCDC144B-206ENST00000609959 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
CCDC144B-206ENST00000609959 GAS6Q14393 721 aa8.31□□□□□ -1.08
CCDC144B-206ENST00000609959 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
CCDC144B-206ENST00000609959 NEDD1Q8NHV4 660 aa8.31□□□□□ -1.08
CCDC144B-206ENST00000609959 ZNF592Q92610 1267 aa8.31□□□□□ -1.08
CCDC144B-206ENST00000609959 ZNF837Q96EG3 531 aaPredicted RBP8.31□□□□□ -1.08
CCDC144B-206ENST00000609959 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
CCDC144B-206ENST00000609959 MEN1O00255 615 aa8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 RHOQP17081 205 aa8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 SLC27A3Q5K4L6 730 aa8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 NLRP3Q96P20 1036 aa8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 FAM117AQ9C073 453 aa8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 HMX1Q9NP08 348 aaPredicted RBP8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 DYRK1BQ9Y463 629 aa8.3□□□□□ -1.08
CCDC144B-206ENST00000609959 MSTNO14793 375 aa8.29□□□□□ -1.08
CCDC144B-206ENST00000609959 BCRP11274 1271 aa8.29□□□□□ -1.08
CCDC144B-206ENST00000609959 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
CCDC144B-206ENST00000609959 IGF1RP08069 1367 aa8.29□□□□□ -1.08
CCDC144B-206ENST00000609959 ZBBXA8MT70 800 aa8.28□□□□□ -1.08
CCDC144B-206ENST00000609959 RFC5P40937 340 aa8.28□□□□□ -1.08
CCDC144B-206ENST00000609959 MCCD1P59942 119 aaPredicted RBP8.28□□□□□ -1.08
CCDC144B-206ENST00000609959 GAS2L1Q99501 681 aaPredicted RBP8.28□□□□□ -1.08
CCDC144B-206ENST00000609959 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
CCDC144B-206ENST00000609959 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
CCDC144B-206ENST00000609959 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
CCDC144B-206ENST00000609959 DBN1Q16643 649 aa8.27□□□□□ -1.09
CCDC144B-206ENST00000609959 TMEM259Q4ZIN3 620 aa8.27□□□□□ -1.09
CCDC144B-206ENST00000609959 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
CCDC144B-206ENST00000609959 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
CCDC144B-206ENST00000609959 GPR25O00155 361 aa8.26□□□□□ -1.09
CCDC144B-206ENST00000609959 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
CCDC144B-206ENST00000609959 WDR44Q5JSH3 913 aa8.26□□□□□ -1.09
CCDC144B-206ENST00000609959 CYP2U1Q7Z449 544 aa8.26□□□□□ -1.09
CCDC144B-206ENST00000609959 ZNF330Q9Y3S2 320 aaPredicted RBP8.26□□□□□ -1.09
CCDC144B-206ENST00000609959 CNTNAP5Q8WYK1 1306 aa8.26□□□□□ -1.09
CCDC144B-206ENST00000609959 MX2P20592 715 aa8.25□□□□□ -1.09
CCDC144B-206ENST00000609959 GTPBP3Q969Y2 492 aaKnown RBP8.25□□□□□ -1.09
CCDC144B-206ENST00000609959 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
CCDC144B-206ENST00000609959 ERVK-9P63128 1117 aa8.24□□□□□ -1.09
CCDC144B-206ENST00000609959 POU4F2Q12837 409 aa8.24□□□□□ -1.09
CCDC144B-206ENST00000609959 PLA2G4EQ3MJ16 856 aa8.24□□□□□ -1.09
CCDC144B-206ENST00000609959 CLN3Q13286 438 aa8.23□□□□□ -1.09
CCDC144B-206ENST00000609959 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
CCDC144B-206ENST00000609959 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
CCDC144B-206ENST00000609959 SPATA31C2B4DYI2 1134 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 MAP2K3P46734 347 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 TAS1R3Q7RTX0 852 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 NBPF15Q8N660 670 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 ACDQ96AP0 544 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 TRIM34Q9BYJ4 488 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 GOPCQ9HD26 462 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 TIMMDC1Q9NPL8 285 aa8.22□□□□□ -1.09
CCDC144B-206ENST00000609959 F11P03951 625 aa8.21□□□□□ -1.1
CCDC144B-206ENST00000609959 SPOCK3Q9BQ16 436 aa8.21□□□□□ -1.1
CCDC144B-206ENST00000609959 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
CCDC144B-206ENST00000609959 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
CCDC144B-206ENST00000609959 GTF2E1P29083 439 aaPredicted RBP8.2□□□□□ -1.1
CCDC144B-206ENST00000609959 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
CCDC144B-206ENST00000609959 WASLO00401 505 aaPredicted RBP8.19□□□□□ -1.1
CCDC144B-206ENST00000609959 OIP5O43482 229 aa8.19□□□□□ -1.1
CCDC144B-206ENST00000609959 ADAM23O75077 832 aa8.19□□□□□ -1.1
CCDC144B-206ENST00000609959 ALYREFQ86V81 257 aaKnown RBP8.19□□□□□ -1.1
CCDC144B-206ENST00000609959 OXCT2Q9BYC2 517 aaPredicted RBP8.19□□□□□ -1.1
CCDC144B-206ENST00000609959 PCDHB11Q9Y5F2 797 aa8.18□□□□□ -1.1
CCDC144B-206ENST00000609959 GNRH1P01148 92 aa8.17□□□□□ -1.1
CCDC144B-206ENST00000609959 NR1H3Q13133 447 aa8.17□□□□□ -1.1
CCDC144B-206ENST00000609959 ARHGEF10LQ9HCE6 1279 aa8.17□□□□□ -1.1
CCDC144B-206ENST00000609959 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
CCDC144B-206ENST00000609959 GDF2Q9UK05 429 aaPredicted RBP8.16□□□□□ -1.1
CCDC144B-206ENST00000609959 PIK3R2O00459 728 aa8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 TRAK2O60296 914 aa8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 MYCP01106 439 aaPredicted RBP8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 PGBD3Q8N328 593 aa8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 ESYT1Q9BSJ8 1104 aa8.15□□□□□ -1.1
CCDC144B-206ENST00000609959 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
CCDC144B-206ENST00000609959 APBB1O00213 710 aa8.14□□□□□ -1.11
CCDC144B-206ENST00000609959 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
CCDC144B-206ENST00000609959 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms