RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 GCP02774 474 aa14.6□□□□□ -0.07
LINC01278-204ENST00000609143 CRB1P82279 1406 aa14.6□□□□□ -0.07
LINC01278-204ENST00000609143 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
LINC01278-204ENST00000609143 C8orf58Q8NAV2 365 aa14.6□□□□□ -0.07
LINC01278-204ENST00000609143 MSH6P52701 1360 aa14.6□□□□□ -0.07
LINC01278-204ENST00000609143 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
LINC01278-204ENST00000609143 ELL2O00472 640 aaPredicted RBP14.59□□□□□ -0.07
LINC01278-204ENST00000609143 ITPRIPQ8IWB1 547 aa14.59□□□□□ -0.07
LINC01278-204ENST00000609143 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
LINC01278-204ENST00000609143 IGHDP01880 384 aa14.59□□□□□ -0.07
LINC01278-204ENST00000609143 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
LINC01278-204ENST00000609143 KIAA0232Q92628 1395 aa14.58□□□□□ -0.07
LINC01278-204ENST00000609143 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
LINC01278-204ENST00000609143 ALS2Q96Q42 1657 aa14.58□□□□□ -0.08
LINC01278-204ENST00000609143 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
LINC01278-204ENST00000609143 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
LINC01278-204ENST00000609143 RWDD1Q9H446 243 aaPredicted RBP14.57□□□□□ -0.08
LINC01278-204ENST00000609143 PCDHB15Q9Y5E8 787 aa14.57□□□□□ -0.08
LINC01278-204ENST00000609143 STRCQ7RTU9 1775 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 LRRC37A3O60309 1634 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 SKAP1Q86WV1 359 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 NPHP3Q7Z494 1330 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 PDE4AP27815 886 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
LINC01278-204ENST00000609143 NBPF6Q5VWK0 638 aa14.55□□□□□ -0.08
LINC01278-204ENST00000609143 NBPF4Q96M43 638 aa14.55□□□□□ -0.08
LINC01278-204ENST00000609143 CHMP4BQ9H444 224 aaKnown RBP14.55□□□□□ -0.08
LINC01278-204ENST00000609143 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
LINC01278-204ENST00000609143 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
LINC01278-204ENST00000609143 BACH2Q9BYV9 841 aa14.54□□□□□ -0.08
LINC01278-204ENST00000609143 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
LINC01278-204ENST00000609143 XIRP1Q702N8 1843 aaKnown RBP14.54□□□□□ -0.08
LINC01278-204ENST00000609143 RGS3P49796 1198 aa14.53□□□□□ -0.08
LINC01278-204ENST00000609143 MED1Q15648 1581 aaPredicted RBP14.52□□□□□ -0.08
LINC01278-204ENST00000609143 RGPD2P0DJD1 1756 aa14.52□□□□□ -0.08
LINC01278-204ENST00000609143 TNS3Q68CZ2 1445 aa14.52□□□□□ -0.09
LINC01278-204ENST00000609143 ABCC4O15439 1325 aa14.52□□□□□ -0.09
LINC01278-204ENST00000609143 ANKRD24Q8TF21 1146 aa14.52□□□□□ -0.09
LINC01278-204ENST00000609143 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.09
LINC01278-204ENST00000609143 NCAPD2Q15021 1401 aa14.52□□□□□ -0.09
LINC01278-204ENST00000609143 KRT24Q2M2I5 525 aa14.51□□□□□ -0.09
LINC01278-204ENST00000609143 BABAM1Q9NWV8 329 aa14.51□□□□□ -0.09
LINC01278-204ENST00000609143 LRRC59Q96AG4 307 aaKnown RBP14.51□□□□□ -0.09
LINC01278-204ENST00000609143 MIS18AQ9NYP9 233 aa14.51□□□□□ -0.09
LINC01278-204ENST00000609143 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
LINC01278-204ENST00000609143 DDX17Q92841 729 aaKnown RBP14.51□□□□□ -0.09
LINC01278-204ENST00000609143 CAMTA1Q9Y6Y1 1673 aa14.5□□□□□ -0.09
LINC01278-204ENST00000609143 PXDNQ92626 1479 aa14.5□□□□□ -0.09
LINC01278-204ENST00000609143 ANP32AP39687 249 aaKnown RBP14.5□□□□□ -0.09
LINC01278-204ENST00000609143 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
LINC01278-204ENST00000609143 IL17REQ8NFR9 667 aa14.5□□□□□ -0.09
LINC01278-204ENST00000609143 AMOTQ4VCS5 1084 aa14.49□□□□□ -0.09
LINC01278-204ENST00000609143 ZC3H6P61129 1189 aaKnown RBP14.49□□□□□ -0.09
LINC01278-204ENST00000609143 TAF7Q15545 349 aaPredicted RBP14.49□□□□□ -0.09
LINC01278-204ENST00000609143 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
LINC01278-204ENST00000609143 PTPRCP08575 1304 aa14.48□□□□□ -0.09
LINC01278-204ENST00000609143 SOS1Q07889 1333 aaPredicted RBP14.48□□□□□ -0.09
LINC01278-204ENST00000609143 ZNF335Q9H4Z2 1342 aaPredicted RBP14.48□□□□□ -0.09
LINC01278-204ENST00000609143 LMO7Q8WWI1 1683 aa14.48□□□□□ -0.09
LINC01278-204ENST00000609143 AXIN2Q9Y2T1 843 aa14.48□□□□□ -0.09
LINC01278-204ENST00000609143 ERBB3P21860 1342 aa14.48□□□□□ -0.09
LINC01278-204ENST00000609143 SPATA31A3Q5VYP0 1347 aa14.48□□□□□ -0.09
LINC01278-204ENST00000609143 ZBTB7BO15156 539 aaPredicted RBP14.47□□□□□ -0.09
LINC01278-204ENST00000609143 ZNF530Q6P9A1 599 aaPredicted RBP14.47□□□□□ -0.09
LINC01278-204ENST00000609143 CEMIPQ8WUJ3 1361 aa14.47□□□□□ -0.09
LINC01278-204ENST00000609143 RGPD5Q99666 1765 aa14.47□□□□□ -0.09
LINC01278-204ENST00000609143 AKAP4Q5JQC9 854 aa14.47□□□□□ -0.09
LINC01278-204ENST00000609143 BRINP3Q76B58 766 aa14.47□□□□□ -0.09
LINC01278-204ENST00000609143 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
LINC01278-204ENST00000609143 ABCC6O95255 1503 aa14.47□□□□□ -0.09
LINC01278-204ENST00000609143 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
LINC01278-204ENST00000609143 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
LINC01278-204ENST00000609143 STK31Q9BXU1 1019 aa14.45□□□□□ -0.1
LINC01278-204ENST00000609143 CRYBG1Q9Y4K1 1723 aa14.45□□□□□ -0.1
LINC01278-204ENST00000609143 INTS3Q68E01 1043 aaKnown RBP14.45□□□□□ -0.1
LINC01278-204ENST00000609143 RGS12O14924 1447 aa14.44□□□□□ -0.1
LINC01278-204ENST00000609143 SLAIN2Q9P270 581 aa14.44□□□□□ -0.1
LINC01278-204ENST00000609143 OVOS2A0A0G2JMS6 1433 aa14.44□□□□□ -0.1
LINC01278-204ENST00000609143 CCDC30Q5VVM6 783 aa14.44□□□□□ -0.1
LINC01278-204ENST00000609143 SMC5Q8IY18 1101 aa14.44□□□□□ -0.1
LINC01278-204ENST00000609143 COL18A1P39060 1754 aa14.44□□□□□ -0.1
LINC01278-204ENST00000609143 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
LINC01278-204ENST00000609143 TEFQ10587 303 aa14.43□□□□□ -0.1
LINC01278-204ENST00000609143 C8orf34Q49A92 452 aa14.43□□□□□ -0.1
LINC01278-204ENST00000609143 CABLES1Q8TDN4 633 aa14.43□□□□□ -0.1
LINC01278-204ENST00000609143 CPDO75976 1380 aa14.43□□□□□ -0.1
LINC01278-204ENST00000609143 LGR6Q9HBX8 967 aa14.42□□□□□ -0.1
LINC01278-204ENST00000609143 NLRP2Q9NX02 1062 aa14.42□□□□□ -0.1
LINC01278-204ENST00000609143 RAPGEF4Q8WZA2 1011 aa14.42□□□□□ -0.1
LINC01278-204ENST00000609143 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
LINC01278-204ENST00000609143 KDM3BQ7LBC6 1761 aa14.41□□□□□ -0.1
LINC01278-204ENST00000609143 CACNA1FO60840 1977 aa14.41□□□□□ -0.1
LINC01278-204ENST00000609143 VIRMAQ69YN4 1812 aaKnown RBP14.41□□□□□ -0.1
LINC01278-204ENST00000609143 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
LINC01278-204ENST00000609143 MSH5O43196 834 aa14.41□□□□□ -0.1
LINC01278-204ENST00000609143 CSB-PGBD3P0DP91 1061 aa14.41□□□□□ -0.1
LINC01278-204ENST00000609143 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
LINC01278-204ENST00000609143 RNMTO43148 476 aaKnown RBP14.4□□□□□ -0.1
LINC01278-204ENST00000609143 MPRIPQ6WCQ1 1025 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms