RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 NCAPD2Q15021 1401 aa20.67■□□□□ 0.9
LMBR1-220ENST00000609081 LRP5O75197 1615 aa20.67■□□□□ 0.9
LMBR1-220ENST00000609081 PSDA5PKW4 1024 aaPredicted RBP20.66■□□□□ 0.9
LMBR1-220ENST00000609081 R3HDM1Q15032 1099 aaKnown RBP20.66■□□□□ 0.9
LMBR1-220ENST00000609081 SHANK3Q9BYB0 1731 aa20.65■□□□□ 0.9
LMBR1-220ENST00000609081 PLEKHG2Q9H7P9 1386 aa20.64■□□□□ 0.89
LMBR1-220ENST00000609081 PTF1AQ7RTS3 328 aa20.64■□□□□ 0.89
LMBR1-220ENST00000609081 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
LMBR1-220ENST00000609081 BTAF1O14981 1849 aa20.64■□□□□ 0.89
LMBR1-220ENST00000609081 PCDH11XQ9BZA7 1347 aa20.63■□□□□ 0.89
LMBR1-220ENST00000609081 PCDH11YQ9BZA8 1340 aa20.63■□□□□ 0.89
LMBR1-220ENST00000609081 KCNQ2O43526 872 aa20.63■□□□□ 0.89
LMBR1-220ENST00000609081 USHBP1Q8N6Y0 703 aa20.63■□□□□ 0.89
LMBR1-220ENST00000609081 TNNT2P45379 298 aaPredicted RBP20.62■□□□□ 0.89
LMBR1-220ENST00000609081 ACSBG1Q96GR2 724 aa20.62■□□□□ 0.89
LMBR1-220ENST00000609081 TXNRD1Q16881 649 aa20.61■□□□□ 0.89
LMBR1-220ENST00000609081 PKD1L3Q7Z443 1732 aa20.61■□□□□ 0.89
LMBR1-220ENST00000609081 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
LMBR1-220ENST00000609081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.6■□□□□ 0.89
LMBR1-220ENST00000609081 DOT1LQ8TEK3 1739 aa20.59■□□□□ 0.89
LMBR1-220ENST00000609081 PROM2Q8N271 834 aa20.59■□□□□ 0.89
LMBR1-220ENST00000609081 EYA1Q99502 592 aa20.59■□□□□ 0.89
LMBR1-220ENST00000609081 PER1O15534 1290 aaPredicted RBP20.58■□□□□ 0.89
LMBR1-220ENST00000609081 EIF4A2Q14240 407 aaKnown RBP20.58■□□□□ 0.89
LMBR1-220ENST00000609081 SPG7Q9UQ90 795 aa20.58■□□□□ 0.89
LMBR1-220ENST00000609081 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.88
LMBR1-220ENST00000609081 SLC27A3Q5K4L6 730 aa20.56■□□□□ 0.88
LMBR1-220ENST00000609081 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
LMBR1-220ENST00000609081 PRIM1P49642 420 aaKnown RBP20.55■□□□□ 0.88
LMBR1-220ENST00000609081 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
LMBR1-220ENST00000609081 SYTL4Q96C24 671 aaPredicted RBP20.54■□□□□ 0.88
LMBR1-220ENST00000609081 STK32BQ9NY57 414 aa20.54■□□□□ 0.88
LMBR1-220ENST00000609081 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
LMBR1-220ENST00000609081 LY75O60449 1722 aa20.51■□□□□ 0.87
LMBR1-220ENST00000609081 CYP27B1O15528 508 aa20.51■□□□□ 0.87
LMBR1-220ENST00000609081 NKX1-1Q15270 411 aaPredicted RBP20.51■□□□□ 0.87
LMBR1-220ENST00000609081 SLC15A2Q16348 729 aa20.51■□□□□ 0.87
LMBR1-220ENST00000609081 PAPPAQ13219 1627 aa20.51■□□□□ 0.87
LMBR1-220ENST00000609081 IFNL2Q8IZJ0 200 aa20.49■□□□□ 0.87
LMBR1-220ENST00000609081 SPON1Q9HCB6 807 aa20.49■□□□□ 0.87
LMBR1-220ENST00000609081 CASZ1Q86V15 1759 aa20.49■□□□□ 0.87
LMBR1-220ENST00000609081 ITGB4P16144 1822 aa20.48■□□□□ 0.87
LMBR1-220ENST00000609081 AMOTQ4VCS5 1084 aa20.47■□□□□ 0.87
LMBR1-220ENST00000609081 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
LMBR1-220ENST00000609081 MTHFSP49914 203 aa20.46■□□□□ 0.87
LMBR1-220ENST00000609081 PLEKHO1Q53GL0 409 aaPredicted RBP20.46■□□□□ 0.87
LMBR1-220ENST00000609081 KDRP35968 1356 aa20.46■□□□□ 0.87
LMBR1-220ENST00000609081 QSER1Q2KHR3 1735 aa20.45■□□□□ 0.86
LMBR1-220ENST00000609081 TOGARAM1Q9Y4F4 1720 aa20.45■□□□□ 0.86
LMBR1-220ENST00000609081 HSP90AB1P08238 724 aaKnown RBP20.45■□□□□ 0.86
LMBR1-220ENST00000609081 PHKG2P15735 406 aa20.45■□□□□ 0.86
LMBR1-220ENST00000609081 IL13P35225 146 aa20.45■□□□□ 0.86
LMBR1-220ENST00000609081 SMARCC1Q92922 1105 aaPredicted RBP20.45■□□□□ 0.86
LMBR1-220ENST00000609081 LRRC4BQ9NT99 713 aa20.45■□□□□ 0.86
LMBR1-220ENST00000609081 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
LMBR1-220ENST00000609081 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
LMBR1-220ENST00000609081 SULT6B1Q6IMI4 303 aa20.41■□□□□ 0.86
LMBR1-220ENST00000609081 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
LMBR1-220ENST00000609081 PALLDQ8WX93 1383 aa20.41■□□□□ 0.86
LMBR1-220ENST00000609081 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
LMBR1-220ENST00000609081 DCAF5Q96JK2 942 aa20.4■□□□□ 0.86
LMBR1-220ENST00000609081 MTFR1LQ9H019 292 aa20.4■□□□□ 0.86
LMBR1-220ENST00000609081 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
LMBR1-220ENST00000609081 ERVV-2B6SEH9 535 aa20.39■□□□□ 0.85
LMBR1-220ENST00000609081 SLC16A10Q8TF71 515 aa20.39■□□□□ 0.85
LMBR1-220ENST00000609081 PIGBQ92521 554 aa20.39■□□□□ 0.85
LMBR1-220ENST00000609081 PPP1R1BQ9UD71 204 aaPredicted RBP20.39■□□□□ 0.85
LMBR1-220ENST00000609081 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
LMBR1-220ENST00000609081 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
LMBR1-220ENST00000609081 ZNF530Q6P9A1 599 aaPredicted RBP20.38■□□□□ 0.85
LMBR1-220ENST00000609081 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
LMBR1-220ENST00000609081 C5P01031 1676 aa20.38■□□□□ 0.85
LMBR1-220ENST00000609081 TFCP2L1Q9NZI6 479 aa20.37■□□□□ 0.85
LMBR1-220ENST00000609081 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
LMBR1-220ENST00000609081 PDGFDQ9GZP0 370 aaPredicted RBP20.36■□□□□ 0.85
LMBR1-220ENST00000609081 ZBTB7AO95365 584 aa20.35■□□□□ 0.85
LMBR1-220ENST00000609081 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
LMBR1-220ENST00000609081 COL3A1P02461 1466 aaPredicted RBP20.34■□□□□ 0.85
LMBR1-220ENST00000609081 TUBGCP6Q96RT7 1819 aa20.34■□□□□ 0.85
LMBR1-220ENST00000609081 KCNQ4P56696 695 aa20.33■□□□□ 0.85
LMBR1-220ENST00000609081 FLAD1Q8NFF5 587 aa20.33■□□□□ 0.85
LMBR1-220ENST00000609081 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
LMBR1-220ENST00000609081 PNPLA7Q6ZV29 1317 aa20.32■□□□□ 0.84
LMBR1-220ENST00000609081 PTGER2P43116 358 aa20.32■□□□□ 0.84
LMBR1-220ENST00000609081 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
LMBR1-220ENST00000609081 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
LMBR1-220ENST00000609081 LOC102724428A0A0B4J2F2 783 aa20.31■□□□□ 0.84
LMBR1-220ENST00000609081 SIK1P57059 783 aa20.31■□□□□ 0.84
LMBR1-220ENST00000609081 ATF5Q9Y2D1 282 aaPredicted RBP20.31■□□□□ 0.84
LMBR1-220ENST00000609081 SCN11AQ9UI33 1791 aa20.31■□□□□ 0.84
LMBR1-220ENST00000609081 CABP4P57796 275 aa20.3■□□□□ 0.84
LMBR1-220ENST00000609081 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
LMBR1-220ENST00000609081 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
LMBR1-220ENST00000609081 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
LMBR1-220ENST00000609081 HMOX1P09601 288 aa20.29■□□□□ 0.84
LMBR1-220ENST00000609081 SGIP1Q9BQI5 828 aa20.29■□□□□ 0.84
LMBR1-220ENST00000609081 ATG3Q9NT62 314 aa20.29■□□□□ 0.84
LMBR1-220ENST00000609081 ASAP1Q9ULH1 1129 aa20.29■□□□□ 0.84
LMBR1-220ENST00000609081 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
LMBR1-220ENST00000609081 AK7Q96M32 723 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms