RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 BCL9LQ86UU0 1499 aa15.17■□□□□ 0.02
CTCFL-221ENST00000608903 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
CTCFL-221ENST00000608903 NWD2Q9ULI1 1742 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 WDR63Q8IWG1 891 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 USP35Q9P2H5 1018 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 MCM10Q7L590 875 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 FNBP4Q8N3X1 1017 aaPredicted RBP15.16■□□□□ 0.02
CTCFL-221ENST00000608903 NGLY1Q96IV0 654 aa15.16■□□□□ 0.02
CTCFL-221ENST00000608903 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
CTCFL-221ENST00000608903 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
CTCFL-221ENST00000608903 PLEKHO1Q53GL0 409 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-221ENST00000608903 IL17REQ8NFR9 667 aa15.14■□□□□ 0.01
CTCFL-221ENST00000608903 TATP17735 454 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-221ENST00000608903 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 ZNF530Q6P9A1 599 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-221ENST00000608903 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 DISP2A7MBM2 1401 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 AMOTQ4VCS5 1084 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 LGR6Q9HBX8 967 aa15.13■□□□□ 0.01
CTCFL-221ENST00000608903 MAP3K5Q99683 1374 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 SPATA31A5Q5VU36 1347 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 SPATA31A7Q8IWB4 1347 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 CYP27B1O15528 508 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 IL2RBP14784 551 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 SHANK3Q9BYB0 1731 aa15.12■□□□□ 0.01
CTCFL-221ENST00000608903 PARP4Q9UKK3 1724 aaKnown RBP15.11■□□□□ 0.01
CTCFL-221ENST00000608903 E9PSI1 815 aa15.11■□□□□ 0.01
CTCFL-221ENST00000608903 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
CTCFL-221ENST00000608903 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
CTCFL-221ENST00000608903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.01
CTCFL-221ENST00000608903 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
CTCFL-221ENST00000608903 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
CTCFL-221ENST00000608903 USP21Q9UK80 565 aa15.1■□□□□ 0.01
CTCFL-221ENST00000608903 IL16Q14005 1332 aa15.1■□□□□ 0.01
CTCFL-221ENST00000608903 HTATSF1O43719 755 aaKnown RBP15.1■□□□□ 0.01
CTCFL-221ENST00000608903 LMOD3Q0VAK6 560 aa15.1■□□□□ 0.01
CTCFL-221ENST00000608903 MEX3CQ5U5Q3 659 aaKnown RBP15.1■□□□□ 0.01
CTCFL-221ENST00000608903 WNK3Q9BYP7 1800 aa15.09■□□□□ 0.01
CTCFL-221ENST00000608903 AFF2P51816 1311 aa15.09■□□□□ 0.01
CTCFL-221ENST00000608903 VIRMAQ69YN4 1812 aaKnown RBP15.09■□□□□ 0.01
CTCFL-221ENST00000608903 PHKG2P15735 406 aa15.09■□□□□ 0.01
CTCFL-221ENST00000608903 VPS72Q15906 364 aa15.09■□□□□ 0.01
CTCFL-221ENST00000608903 ZCRB1Q8TBF4 217 aaKnown RBP15.09■□□□□ 0.01
CTCFL-221ENST00000608903 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
CTCFL-221ENST00000608903 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
CTCFL-221ENST00000608903 CEMIPQ8WUJ3 1361 aa15.08■□□□□ 0.01
CTCFL-221ENST00000608903 FANCIQ9NVI1 1328 aa15.08■□□□□ 0
CTCFL-221ENST00000608903 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
CTCFL-221ENST00000608903 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
CTCFL-221ENST00000608903 LAS1LQ9Y4W2 734 aaKnown RBP15.08■□□□□ 0
CTCFL-221ENST00000608903 PLEKHG2Q9H7P9 1386 aa15.08■□□□□ 0
CTCFL-221ENST00000608903 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
CTCFL-221ENST00000608903 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
CTCFL-221ENST00000608903 RNMTO43148 476 aaKnown RBP15.07■□□□□ 0
CTCFL-221ENST00000608903 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
CTCFL-221ENST00000608903 C1orf141Q5JVX7 400 aa15.07■□□□□ 0
CTCFL-221ENST00000608903 MBIPQ9NS73 344 aa15.07■□□□□ 0
CTCFL-221ENST00000608903 IFT57Q9NWB7 429 aa15.07■□□□□ 0
CTCFL-221ENST00000608903 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
CTCFL-221ENST00000608903 CHL1O00533 1208 aa15.06■□□□□ 0
CTCFL-221ENST00000608903 CFAP44Q96MT7 982 aa15.06■□□□□ 0
CTCFL-221ENST00000608903 IFNL2Q8IZJ0 200 aa15.05■□□□□ 0
CTCFL-221ENST00000608903 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ 0
CTCFL-221ENST00000608903 FKBP8Q14318 412 aa15.05■□□□□ -0
CTCFL-221ENST00000608903 BARGINQ6ZT62 677 aa15.05■□□□□ -0
CTCFL-221ENST00000608903 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
CTCFL-221ENST00000608903 SCN11AQ9UI33 1791 aa15.05■□□□□ -0
CTCFL-221ENST00000608903 GLI3P10071 1580 aa15.04■□□□□ -0
CTCFL-221ENST00000608903 ATRNO75882 1429 aa15.04■□□□□ -0
CTCFL-221ENST00000608903 GNAI1P63096 354 aa15.04■□□□□ -0
CTCFL-221ENST00000608903 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
CTCFL-221ENST00000608903 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
CTCFL-221ENST00000608903 FAM98CQ17RN3 349 aaKnown RBP15.04■□□□□ -0
CTCFL-221ENST00000608903 CALD1Q05682 793 aaKnown RBP15.03■□□□□ -0
CTCFL-221ENST00000608903 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
CTCFL-221ENST00000608903 KRT24Q2M2I5 525 aa15.03■□□□□ -0
CTCFL-221ENST00000608903 PCDH11XQ9BZA7 1347 aa15.03■□□□□ -0
CTCFL-221ENST00000608903 PCDH11YQ9BZA8 1340 aa15.03■□□□□ -0
CTCFL-221ENST00000608903 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
CTCFL-221ENST00000608903 TSPYL6Q8N831 410 aa15.02■□□□□ -0
CTCFL-221ENST00000608903 KCNQ3O43525 872 aa15.02□□□□□ -0.01
CTCFL-221ENST00000608903 TAF7Q15545 349 aaPredicted RBP15.02□□□□□ -0.01
CTCFL-221ENST00000608903 GJD4Q96KN9 370 aaPredicted RBP15.02□□□□□ -0.01
CTCFL-221ENST00000608903 EXOC5O00471 708 aa15.01□□□□□ -0.01
CTCFL-221ENST00000608903 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
CTCFL-221ENST00000608903 RCAN3Q9UKA8 241 aa15.01□□□□□ -0.01
CTCFL-221ENST00000608903 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
CTCFL-221ENST00000608903 DCAF5Q96JK2 942 aa15.01□□□□□ -0.01
CTCFL-221ENST00000608903 TNS2Q63HR2 1409 aa15□□□□□ -0.01
CTCFL-221ENST00000608903 CDCA7Q9BWT1 371 aaPredicted RBP15□□□□□ -0.01
CTCFL-221ENST00000608903 QTRT2Q9H974 415 aaKnown RBP15□□□□□ -0.01
CTCFL-221ENST00000608903 MARCH10Q8NA82 808 aaPredicted RBP14.99□□□□□ -0.01
CTCFL-221ENST00000608903 NFATC2IPQ8NCF5 419 aa14.99□□□□□ -0.01
CTCFL-221ENST00000608903 TSPYL4Q9UJ04 414 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms