RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, human

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM8-208	ENST00000608535	LCA5	Q86VQ0	697 aa		11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	FAM43A	Q8N2R8	423 aa		11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	SNRK	Q9NRH2	765 aa		11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	NOL7	Q9UMY1	257 aa	Known RBP	11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	MSH5	O43196	834 aa		11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	ATP2B1	P20020	1258 aa		11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	NOM1	Q5C9Z4	860 aa	Known RBP	11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	OGFOD1	Q8N543	542 aa		11.5	□□□□□ -0.57
SMIM8-208	ENST00000608535	IGHD	P01880	384 aa		11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	MLLT3	P42568	568 aa	Predicted RBP	11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	C22orf23	Q9BZE7	217 aa		11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	EVL	Q9UI08	416 aa	Predicted RBP	11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	SCIN	Q9Y6U3	715 aa		11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	HDLBP	Q00341	1268 aa	Known RBP	11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	KANK3	Q6NY19	840 aa		11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	USP25	Q9UHP3	1055 aa		11.49	□□□□□ -0.57
SMIM8-208	ENST00000608535	ANKRD33B	A6NCL7	494 aa		11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	CCT2	P78371	535 aa	Known RBP	11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	YY1AP1	Q9H869	796 aa		11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	POLR3E	Q9NVU0	708 aa		11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	ABCF2	Q9UG63	623 aa		11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	TIMM44	O43615	452 aa		11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	MKRN4P	Q13434	485 aa	Predicted RBP	11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	STAG1	Q8WVM7	1258 aa		11.48	□□□□□ -0.57
SMIM8-208	ENST00000608535	TRIM29	Q14134	588 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	CAPN10	Q9HC96	672 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	C1QTNF12	Q5T7M4	302 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	FLCN	Q8NFG4	579 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	MKL1	Q969V6	931 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	TBX22	Q9Y458	520 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	HTATSF1	O43719	755 aa	Known RBP	11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	TSC1	Q92574	1164 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	ITFG2	Q969R8	447 aa		11.47	□□□□□ -0.57
SMIM8-208	ENST00000608535	BICDL2	A1A5D9	508 aa		11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	C11orf95	C9JLR9	678 aa	Predicted RBP	11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	KCNA2	P16389	499 aa		11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	MARS	P56192	900 aa	Known RBP	11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	SEZ6L	Q9BYH1	1024 aa		11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	AGBL1	Q96MI9	1066 aa		11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	CWC25	Q9NXE8	425 aa	Predicted RBP	11.46	□□□□□ -0.57
SMIM8-208	ENST00000608535	DDX56	Q9NY93	547 aa	Known RBP	11.46	□□□□□ -0.58
SMIM8-208	ENST00000608535	CEP83	Q9Y592	693 aa		11.46	□□□□□ -0.58
SMIM8-208	ENST00000608535	GJA3	Q9Y6H8	435 aa		11.46	□□□□□ -0.58
SMIM8-208	ENST00000608535	CUX2	O14529	1486 aa		11.45	□□□□□ -0.58
SMIM8-208	ENST00000608535	SEPT2	Q15019	361 aa		11.45	□□□□□ -0.58
SMIM8-208	ENST00000608535	CEP164	Q9UPV0	1460 aa		11.45	□□□□□ -0.58
SMIM8-208	ENST00000608535	TBC1D12	O60347	775 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	CCDC88B	A6NC98	1476 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	CCDC89	Q8N998	374 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	BACH2	Q9BYV9	841 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	NBPF3	Q9H094	633 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	IFT122	Q9HBG6	1241 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	CAPN15	O75808	1086 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	TPM3	P06753	285 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	PAX7	P23759	505 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	ALDH1L2	Q3SY69	923 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	UBE2Q1	Q7Z7E8	422 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	RAVER1	Q8IY67	606 aa	Known RBP	11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	MUC3B	Q9H195	1237 aa		11.44	□□□□□ -0.58
SMIM8-208	ENST00000608535	FAM161A	Q3B820	660 aa		11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	ZBTB9	Q96C00	473 aa		11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	MICALL1	Q8N3F8	863 aa		11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	FANCD2	Q9BXW9	1451 aa		11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	RPUSD2	Q8IZ73	545 aa	Known RBP	11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	GAS2L2	Q8NHY3	880 aa		11.43	□□□□□ -0.58
SMIM8-208	ENST00000608535	DNAJC21	Q5F1R6	531 aa	Known RBP	11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	RABGAP1	Q9Y3P9	1069 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	CFTR	P13569	1480 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	CCDC102A	Q96A19	550 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	SLC26A4	O43511	780 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	ZNF131	P52739	623 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	NFE2L2	Q16236	605 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	LARP1B	Q659C4	914 aa	Known RBP	11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	MPP4	Q96JB8	637 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	CD248	Q9HCU0	757 aa		11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	RYDEN	Q9NUL5	291 aa	Known RBP	11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	TTF2	Q9UNY4	1162 aa	Known RBP	11.42	□□□□□ -0.58
SMIM8-208	ENST00000608535	TNNT1	P13805	278 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	TNNI2	P48788	182 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	XPC	Q01831	940 aa	Predicted RBP	11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	ALKBH2	Q6NS38	261 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	MRGBP	Q9NV56	204 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	SERPINB4	P48594	390 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	UVSSA	Q2YD98	709 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	LZTS1	Q9Y250	596 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	IPO7	O95373	1038 aa	Known RBP	11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	LMOD1	P29536	600 aa	Predicted RBP	11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	ABCD1	P33897	745 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	SRPK2	P78362	688 aa	Known RBP	11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	ZBED6	P86452	979 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	UHMK1	Q8TAS1	419 aa	Known RBP	11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	FAM210A	Q96ND0	272 aa		11.41	□□□□□ -0.58
SMIM8-208	ENST00000608535	TMCC3	Q9ULS5	477 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms