RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 GNAT3A8MTJ3 354 aa28.47■■■□□ 2.15
USF2-216ENST00000607959 CALD1Q05682 793 aaKnown RBP28.47■■■□□ 2.15
USF2-216ENST00000607959 HTATSF1O43719 755 aaKnown RBP28.46■■■□□ 2.15
USF2-216ENST00000607959 EXOSC9Q06265 439 aaKnown RBP28.46■■■□□ 2.15
USF2-216ENST00000607959 RRP1P56182 461 aaKnown RBP28.45■■■□□ 2.15
USF2-216ENST00000607959 CFAP44Q96MT7 982 aa28.45■■■□□ 2.15
USF2-216ENST00000607959 GNAI1P63096 354 aa28.45■■■□□ 2.14
USF2-216ENST00000607959 PLEKHO1Q53GL0 409 aaPredicted RBP28.45■■■□□ 2.14
USF2-216ENST00000607959 LARP1Q6PKG0 1096 aaKnown RBP28.45■■■□□ 2.14
USF2-216ENST00000607959 IL17REQ8NFR9 667 aa28.45■■■□□ 2.14
USF2-216ENST00000607959 MBIPQ9NS73 344 aa28.45■■■□□ 2.14
USF2-216ENST00000607959 BTG4Q9NY30 223 aa28.45■■■□□ 2.14
USF2-216ENST00000607959 LAS1LQ9Y4W2 734 aaKnown RBP28.45■■■□□ 2.14
USF2-216ENST00000607959 NEFLP07196 543 aa28.43■■■□□ 2.14
USF2-216ENST00000607959 AMOTQ4VCS5 1084 aa28.43■■■□□ 2.14
USF2-216ENST00000607959 STRN4Q9NRL3 753 aa28.43■■■□□ 2.14
USF2-216ENST00000607959 ZNF530Q6P9A1 599 aaPredicted RBP28.42■■■□□ 2.14
USF2-216ENST00000607959 TOM1L2Q6ZVM7 507 aa28.42■■■□□ 2.14
USF2-216ENST00000607959 RTF1Q92541 710 aaKnown RBP28.42■■■□□ 2.14
USF2-216ENST00000607959 RAPGEF4Q8WZA2 1011 aa28.41■■■□□ 2.14
USF2-216ENST00000607959 PLCH1Q4KWH8 1693 aa28.41■■■□□ 2.14
USF2-216ENST00000607959 CHL1O00533 1208 aa28.41■■■□□ 2.14
USF2-216ENST00000607959 CARD10Q9BWT7 1032 aa28.41■■■□□ 2.14
USF2-216ENST00000607959 PKD1L3Q7Z443 1732 aa28.4■■■□□ 2.14
USF2-216ENST00000607959 BCAR3O75815 825 aa28.4■■■□□ 2.14
USF2-216ENST00000607959 ADAMTS2O95450 1211 aa28.4■■■□□ 2.14
USF2-216ENST00000607959 CEMIPQ8WUJ3 1361 aa28.4■■■□□ 2.14
USF2-216ENST00000607959 AKAP4Q5JQC9 854 aa28.39■■■□□ 2.14
USF2-216ENST00000607959 PLIN1O60240 522 aa28.39■■■□□ 2.13
USF2-216ENST00000607959 TATP17735 454 aaPredicted RBP28.39■■■□□ 2.13
USF2-216ENST00000607959 NUTM2BA6NNL0 878 aaPredicted RBP28.38■■■□□ 2.13
USF2-216ENST00000607959 NUTM2EB1AL46 878 aaPredicted RBP28.38■■■□□ 2.13
USF2-216ENST00000607959 RARSP54136 660 aaKnown RBP28.38■■■□□ 2.13
USF2-216ENST00000607959 EVA1CP58658 441 aa28.38■■■□□ 2.13
USF2-216ENST00000607959 NUTM2AQ8IVF1 878 aaPredicted RBP28.38■■■□□ 2.13
USF2-216ENST00000607959 LGR6Q9HBX8 967 aa28.38■■■□□ 2.13
USF2-216ENST00000607959 PLEKHG2Q9H7P9 1386 aa28.38■■■□□ 2.13
USF2-216ENST00000607959 JCADQ9P266 1359 aa28.38■■■□□ 2.13
USF2-216ENST00000607959 VIRMAQ69YN4 1812 aaKnown RBP28.38■■■□□ 2.13
USF2-216ENST00000607959 OVOS2A0A0G2JMS6 1433 aa28.37■■■□□ 2.13
USF2-216ENST00000607959 NRAPQ86VF7 1730 aa28.36■■■□□ 2.13
USF2-216ENST00000607959 ADAMTS7Q9UKP4 1686 aa28.36■■■□□ 2.13
USF2-216ENST00000607959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.36■■■□□ 2.13
USF2-216ENST00000607959 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
USF2-216ENST00000607959 MIS18AQ9NYP9 233 aa28.35■■■□□ 2.13
USF2-216ENST00000607959 CT47B1P0C2W7 299 aaPredicted RBP28.34■■■□□ 2.13
USF2-216ENST00000607959 TSPYL6Q8N831 410 aa28.34■■■□□ 2.13
USF2-216ENST00000607959 HSPA1LP34931 641 aa28.33■■■□□ 2.13
USF2-216ENST00000607959 MPRIPQ6WCQ1 1025 aa28.33■■■□□ 2.13
USF2-216ENST00000607959 C8orf58Q8NAV2 365 aa28.33■■■□□ 2.13
USF2-216ENST00000607959 CYP27B1O15528 508 aa28.31■■■□□ 2.12
USF2-216ENST00000607959 RNMTO43148 476 aaKnown RBP28.31■■■□□ 2.12
USF2-216ENST00000607959 C1orf141Q5JVX7 400 aa28.31■■■□□ 2.12
USF2-216ENST00000607959 SPG7Q9UQ90 795 aa28.31■■■□□ 2.12
USF2-216ENST00000607959 SLIT2O94813 1529 aa28.31■■■□□ 2.12
USF2-216ENST00000607959 SHANK3Q9BYB0 1731 aa28.31■■■□□ 2.12
USF2-216ENST00000607959 PHKG2P15735 406 aa28.3■■■□□ 2.12
USF2-216ENST00000607959 KRT24Q2M2I5 525 aa28.3■■■□□ 2.12
USF2-216ENST00000607959 VAMP4O75379 141 aa28.3■■■□□ 2.12
USF2-216ENST00000607959 C20orf194Q5TEA3 1177 aa28.3■■■□□ 2.12
USF2-216ENST00000607959 KDM6AO15550 1401 aaPredicted RBP28.29■■■□□ 2.12
USF2-216ENST00000607959 LRP6O75581 1613 aa28.29■■■□□ 2.12
USF2-216ENST00000607959 BCL2L13Q9BXK5 485 aa28.29■■■□□ 2.12
USF2-216ENST00000607959 IL2RBP14784 551 aa28.28■■■□□ 2.12
USF2-216ENST00000607959 NWD2Q9ULI1 1742 aa28.28■■■□□ 2.12
USF2-216ENST00000607959 SCN11AQ9UI33 1791 aa28.28■■■□□ 2.12
USF2-216ENST00000607959 TAF7Q15545 349 aaPredicted RBP28.28■■■□□ 2.12
USF2-216ENST00000607959 SSH1Q8WYL5 1049 aa28.28■■■□□ 2.12
USF2-216ENST00000607959 USP35Q9P2H5 1018 aa28.28■■■□□ 2.12
USF2-216ENST00000607959 SIPA1L3O60292 1781 aaPredicted RBP28.27■■■□□ 2.12
USF2-216ENST00000607959 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
USF2-216ENST00000607959 TSPYL4Q9UJ04 414 aa28.27■■■□□ 2.12
USF2-216ENST00000607959 DISP2A7MBM2 1401 aa28.27■■■□□ 2.12
USF2-216ENST00000607959 TWISTNBQ3B726 338 aaPredicted RBP28.25■■■□□ 2.11
USF2-216ENST00000607959 IFNL2Q8IZJ0 200 aa28.25■■■□□ 2.11
USF2-216ENST00000607959 KDM3BQ7LBC6 1761 aa28.25■■■□□ 2.11
USF2-216ENST00000607959 ZCRB1Q8TBF4 217 aaKnown RBP28.24■■■□□ 2.11
USF2-216ENST00000607959 ERICH6BQ5W0A0 696 aa28.24■■■□□ 2.11
USF2-216ENST00000607959 BABAM1Q9NWV8 329 aa28.24■■■□□ 2.11
USF2-216ENST00000607959 SPATA31A6Q5VVP1 1343 aa28.23■■■□□ 2.11
USF2-216ENST00000607959 WNK3Q9BYP7 1800 aa28.23■■■□□ 2.11
USF2-216ENST00000607959 ALDH1L2Q3SY69 923 aa28.2■■■□□ 2.11
USF2-216ENST00000607959 EXOC6Q8TAG9 804 aa28.2■■■□□ 2.11
USF2-216ENST00000607959 BCL9LQ86UU0 1499 aa28.2■■■□□ 2.1
USF2-216ENST00000607959 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.2■■■□□ 2.1
USF2-216ENST00000607959 ZNF428Q96B54 188 aa28.2■■■□□ 2.1
USF2-216ENST00000607959 SMC4Q9NTJ3 1288 aa28.2■■■□□ 2.1
USF2-216ENST00000607959 TNNQ9UQP3 1299 aa28.2■■■□□ 2.1
USF2-216ENST00000607959 SPATA31A1Q5TZJ5 1347 aa28.19■■■□□ 2.1
USF2-216ENST00000607959 PCDH11XQ9BZA7 1347 aa28.19■■■□□ 2.1
USF2-216ENST00000607959 PCDH11YQ9BZA8 1340 aa28.19■■■□□ 2.1
USF2-216ENST00000607959 TEFQ10587 303 aa28.19■■■□□ 2.1
USF2-216ENST00000607959 KCNQ3O43525 872 aa28.18■■■□□ 2.1
USF2-216ENST00000607959 MRC1P22897 1456 aa28.18■■■□□ 2.1
USF2-216ENST00000607959 C8orf37Q96NL8 207 aa28.18■■■□□ 2.1
USF2-216ENST00000607959 FRAT1Q92837 279 aaPredicted RBP28.17■■■□□ 2.1
USF2-216ENST00000607959 DCAF5Q96JK2 942 aa28.17■■■□□ 2.1
USF2-216ENST00000607959 CRBNQ96SW2 442 aa28.17■■■□□ 2.1
USF2-216ENST00000607959 SPATA31A5Q5VU36 1347 aa28.16■■■□□ 2.1
USF2-216ENST00000607959 SPATA31A7Q8IWB4 1347 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms