RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TMF1P82094 1093 aa19.03■□□□□ 0.64
CTSA-218ENST00000607814 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
CTSA-218ENST00000607814 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
CTSA-218ENST00000607814 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
CTSA-218ENST00000607814 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
CTSA-218ENST00000607814 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
CTSA-218ENST00000607814 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
CTSA-218ENST00000607814 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
CTSA-218ENST00000607814 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
CTSA-218ENST00000607814 IP6K1Q92551 441 aa19■□□□□ 0.63
CTSA-218ENST00000607814 TERF2IPQ9NYB0 399 aa19■□□□□ 0.63
CTSA-218ENST00000607814 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
CTSA-218ENST00000607814 LY75O60449 1722 aa19■□□□□ 0.63
CTSA-218ENST00000607814 HMGB2P26583 209 aaKnown RBP18.99■□□□□ 0.63
CTSA-218ENST00000607814 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
CTSA-218ENST00000607814 POLR3GLQ9BT43 218 aa18.99■□□□□ 0.63
CTSA-218ENST00000607814 PRIM1P49642 420 aaKnown RBP18.98■□□□□ 0.63
CTSA-218ENST00000607814 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
CTSA-218ENST00000607814 YBX3P16989 372 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTSA-218ENST00000607814 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
CTSA-218ENST00000607814 NSD2O96028 1365 aa18.96■□□□□ 0.63
CTSA-218ENST00000607814 FBLN1P23142 703 aa18.96■□□□□ 0.63
CTSA-218ENST00000607814 CCNL1Q9UK58 526 aaPredicted RBP18.95■□□□□ 0.62
CTSA-218ENST00000607814 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
CTSA-218ENST00000607814 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
CTSA-218ENST00000607814 KCNQ4P56696 695 aa18.94■□□□□ 0.62
CTSA-218ENST00000607814 ATP10DQ9P241 1426 aa18.93■□□□□ 0.62
CTSA-218ENST00000607814 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
CTSA-218ENST00000607814 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
CTSA-218ENST00000607814 CD2APQ9Y5K6 639 aa18.93■□□□□ 0.62
CTSA-218ENST00000607814 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
CTSA-218ENST00000607814 FLAD1Q8NFF5 587 aa18.92■□□□□ 0.62
CTSA-218ENST00000607814 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
CTSA-218ENST00000607814 MSH5O43196 834 aa18.91■□□□□ 0.62
CTSA-218ENST00000607814 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
CTSA-218ENST00000607814 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
CTSA-218ENST00000607814 GPBP1L1Q9HC44 474 aaPredicted RBP18.9■□□□□ 0.62
CTSA-218ENST00000607814 HOXC9P31274 260 aa18.89■□□□□ 0.61
CTSA-218ENST00000607814 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
CTSA-218ENST00000607814 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
CTSA-218ENST00000607814 ADCY9O60503 1353 aa18.89■□□□□ 0.61
CTSA-218ENST00000607814 HSPA6P17066 643 aa18.88■□□□□ 0.61
CTSA-218ENST00000607814 COG3Q96JB2 828 aa18.88■□□□□ 0.61
CTSA-218ENST00000607814 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
CTSA-218ENST00000607814 FYB1O15117 783 aa18.87■□□□□ 0.61
CTSA-218ENST00000607814 MEGF6O75095 1541 aa18.87■□□□□ 0.61
CTSA-218ENST00000607814 AMPHP49418 695 aa18.87■□□□□ 0.61
CTSA-218ENST00000607814 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
CTSA-218ENST00000607814 MSL1Q68DK7 614 aa18.85■□□□□ 0.61
CTSA-218ENST00000607814 C5P01031 1676 aa18.85■□□□□ 0.61
CTSA-218ENST00000607814 RRS1Q15050 365 aaKnown RBP18.83■□□□□ 0.6
CTSA-218ENST00000607814 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
CTSA-218ENST00000607814 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
CTSA-218ENST00000607814 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
CTSA-218ENST00000607814 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
CTSA-218ENST00000607814 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
CTSA-218ENST00000607814 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
CTSA-218ENST00000607814 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
CTSA-218ENST00000607814 PALLDQ8WX93 1383 aa18.81■□□□□ 0.6
CTSA-218ENST00000607814 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
CTSA-218ENST00000607814 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
CTSA-218ENST00000607814 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
CTSA-218ENST00000607814 SMARCC1Q92922 1105 aaPredicted RBP18.79■□□□□ 0.6
CTSA-218ENST00000607814 PANK3Q9H999 370 aa18.78■□□□□ 0.6
CTSA-218ENST00000607814 C4BP0C0L5 1744 aa18.77■□□□□ 0.6
CTSA-218ENST00000607814 IGSF1Q8N6C5 1336 aa18.77■□□□□ 0.6
CTSA-218ENST00000607814 ZNF526Q8TF50 670 aaPredicted RBP18.77■□□□□ 0.6
CTSA-218ENST00000607814 AK7Q96M32 723 aa18.77■□□□□ 0.6
CTSA-218ENST00000607814 SSFA2P28290 1259 aa18.75■□□□□ 0.59
CTSA-218ENST00000607814 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
CTSA-218ENST00000607814 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
CTSA-218ENST00000607814 INSRP06213 1382 aa18.74■□□□□ 0.59
CTSA-218ENST00000607814 KIF3CO14782 793 aa18.74■□□□□ 0.59
CTSA-218ENST00000607814 TNNT2P45379 298 aaPredicted RBP18.74■□□□□ 0.59
CTSA-218ENST00000607814 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
CTSA-218ENST00000607814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.73■□□□□ 0.59
CTSA-218ENST00000607814 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
CTSA-218ENST00000607814 APLP1P51693 650 aa18.73■□□□□ 0.59
CTSA-218ENST00000607814 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
CTSA-218ENST00000607814 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
CTSA-218ENST00000607814 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
CTSA-218ENST00000607814 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
CTSA-218ENST00000607814 CYP27B1O15528 508 aa18.72■□□□□ 0.59
CTSA-218ENST00000607814 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
CTSA-218ENST00000607814 EMILIN1Q9Y6C2 1016 aa18.72■□□□□ 0.59
CTSA-218ENST00000607814 FLT4P35916 1363 aa18.71■□□□□ 0.59
CTSA-218ENST00000607814 KIF20BQ96Q89 1820 aa18.71■□□□□ 0.59
CTSA-218ENST00000607814 ITGB4P16144 1822 aa18.7■□□□□ 0.58
CTSA-218ENST00000607814 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
CTSA-218ENST00000607814 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
CTSA-218ENST00000607814 PHF14O94880 888 aa18.69■□□□□ 0.58
CTSA-218ENST00000607814 PIGBQ92521 554 aa18.69■□□□□ 0.58
CTSA-218ENST00000607814 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
CTSA-218ENST00000607814 TOMM70O94826 608 aa18.68■□□□□ 0.58
CTSA-218ENST00000607814 SIK1P57059 783 aa18.68■□□□□ 0.58
CTSA-218ENST00000607814 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
CTSA-218ENST00000607814 PKD1L3Q7Z443 1732 aa18.68■□□□□ 0.58
CTSA-218ENST00000607814 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
CTSA-218ENST00000607814 TGFB2P61812 414 aa18.66■□□□□ 0.58
CTSA-218ENST00000607814 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms