RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 ANKRD36BQ8N2N9 1353 aa29.35■■■□□ 2.29
VIM-AS1-202ENST00000605833 PRIM1P49642 420 aaKnown RBP29.34■■■□□ 2.29
VIM-AS1-202ENST00000605833 COL24A1Q17RW2 1714 aa29.34■■■□□ 2.29
VIM-AS1-202ENST00000605833 SLC27A3Q5K4L6 730 aa29.33■■■□□ 2.29
VIM-AS1-202ENST00000605833 ZNF784Q8NCA9 323 aaPredicted RBP29.33■■■□□ 2.29
VIM-AS1-202ENST00000605833 PNPLA7Q6ZV29 1317 aa29.33■■■□□ 2.29
VIM-AS1-202ENST00000605833 KIF20BQ96Q89 1820 aa29.32■■■□□ 2.28
VIM-AS1-202ENST00000605833 MAP3K5Q99683 1374 aa29.32■■■□□ 2.28
VIM-AS1-202ENST00000605833 RRS1Q15050 365 aaKnown RBP29.32■■■□□ 2.28
VIM-AS1-202ENST00000605833 RTL1A6NKG5 1358 aa29.31■■■□□ 2.28
VIM-AS1-202ENST00000605833 KLHL34Q8N239 644 aa29.31■■■□□ 2.28
VIM-AS1-202ENST00000605833 USHBP1Q8N6Y0 703 aa29.3■■■□□ 2.28
VIM-AS1-202ENST00000605833 ZCRB1Q8TBF4 217 aaKnown RBP29.3■■■□□ 2.28
VIM-AS1-202ENST00000605833 GGNBP2Q9H3C7 697 aa29.29■■■□□ 2.28
VIM-AS1-202ENST00000605833 TFCP2L1Q9NZI6 479 aa29.28■■■□□ 2.28
VIM-AS1-202ENST00000605833 NBPF6Q5VWK0 638 aa29.27■■■□□ 2.28
VIM-AS1-202ENST00000605833 NBPF4Q96M43 638 aa29.27■■■□□ 2.28
VIM-AS1-202ENST00000605833 FYB1O15117 783 aa29.25■■■□□ 2.27
VIM-AS1-202ENST00000605833 USP47Q96K76 1375 aa29.25■■■□□ 2.27
VIM-AS1-202ENST00000605833 POLD1P28340 1107 aa29.24■■■□□ 2.27
VIM-AS1-202ENST00000605833 SMG6Q86US8 1419 aaKnown RBP29.24■■■□□ 2.27
VIM-AS1-202ENST00000605833 SLC16A10Q8TF71 515 aa29.24■■■□□ 2.27
VIM-AS1-202ENST00000605833 GOLGB1Q14789 3259 aaKnown RBP29.24■■■□□ 2.27
VIM-AS1-202ENST00000605833 CCNL1Q9UK58 526 aaPredicted RBP29.23■■■□□ 2.27
VIM-AS1-202ENST00000605833 C5P01031 1676 aa29.21■■■□□ 2.27
VIM-AS1-202ENST00000605833 SLC24A1O60721 1099 aa29.21■■■□□ 2.27
VIM-AS1-202ENST00000605833 TMF1P82094 1093 aa29.21■■■□□ 2.27
VIM-AS1-202ENST00000605833 GPR162Q16538 588 aa29.21■■■□□ 2.27
VIM-AS1-202ENST00000605833 PELP1Q8IZL8 1130 aaKnown RBP29.19■■■□□ 2.26
VIM-AS1-202ENST00000605833 RAPGEF4Q8WZA2 1011 aa29.19■■■□□ 2.26
VIM-AS1-202ENST00000605833 TOGARAM1Q9Y4F4 1720 aa29.19■■■□□ 2.26
VIM-AS1-202ENST00000605833 HSP90AB2PQ58FF8 381 aa29.18■■■□□ 2.26
VIM-AS1-202ENST00000605833 NLGN2Q8NFZ4 835 aa29.18■■■□□ 2.26
VIM-AS1-202ENST00000605833 INSRP06213 1382 aa29.16■■■□□ 2.26
VIM-AS1-202ENST00000605833 TAF1LQ8IZX4 1826 aa29.16■■■□□ 2.26
VIM-AS1-202ENST00000605833 MSH5O43196 834 aa29.16■■■□□ 2.26
VIM-AS1-202ENST00000605833 TATP17735 454 aaPredicted RBP29.16■■■□□ 2.26
VIM-AS1-202ENST00000605833 CGNL1Q0VF96 1302 aa29.16■■■□□ 2.26
VIM-AS1-202ENST00000605833 FLT4P35916 1363 aa29.15■■■□□ 2.26
VIM-AS1-202ENST00000605833 ITGB4P16144 1822 aa29.14■■■□□ 2.26
VIM-AS1-202ENST00000605833 COL23A1Q86Y22 540 aaPredicted RBP29.13■■■□□ 2.25
VIM-AS1-202ENST00000605833 PKD1L3Q7Z443 1732 aa29.13■■■□□ 2.25
VIM-AS1-202ENST00000605833 PCDH11XQ9BZA7 1347 aa29.13■■■□□ 2.25
VIM-AS1-202ENST00000605833 PCDH11YQ9BZA8 1340 aa29.13■■■□□ 2.25
VIM-AS1-202ENST00000605833 MSL1Q68DK7 614 aa29.12■■■□□ 2.25
VIM-AS1-202ENST00000605833 NSD3Q9BZ95 1437 aa29.11■■■□□ 2.25
VIM-AS1-202ENST00000605833 PCGF6Q9BYE7 350 aa29.1■■■□□ 2.25
VIM-AS1-202ENST00000605833 PALLDQ8WX93 1383 aa29.1■■■□□ 2.25
VIM-AS1-202ENST00000605833 ANKRD26Q9UPS8 1709 aa29.09■■■□□ 2.25
VIM-AS1-202ENST00000605833 EMILIN1Q9Y6C2 1016 aa29.09■■■□□ 2.25
VIM-AS1-202ENST00000605833 CARD14Q9BXL6 1004 aa29.08■■■□□ 2.25
VIM-AS1-202ENST00000605833 CYP27B1O15528 508 aa29.07■■■□□ 2.24
VIM-AS1-202ENST00000605833 C4BP0C0L5 1744 aa29.07■■■□□ 2.24
VIM-AS1-202ENST00000605833 KIF24Q5T7B8 1368 aa29.07■■■□□ 2.24
VIM-AS1-202ENST00000605833 MPRIPQ6WCQ1 1025 aa29.07■■■□□ 2.24
VIM-AS1-202ENST00000605833 YBX3P16989 372 aaKnown RBP eCLIP29.05■■■□□ 2.24
VIM-AS1-202ENST00000605833 CDCA8Q53HL2 280 aa29.05■■■□□ 2.24
VIM-AS1-202ENST00000605833 SENP3-EIF4A1A0A087X0R7 540 aa29.04■■■□□ 2.24
VIM-AS1-202ENST00000605833 C1QTNF8P60827 252 aa29.04■■■□□ 2.24
VIM-AS1-202ENST00000605833 PPM1GO15355 546 aaPredicted RBP29.02■■■□□ 2.24
VIM-AS1-202ENST00000605833 NCAPD2Q15021 1401 aa29.02■■■□□ 2.24
VIM-AS1-202ENST00000605833 UBR3Q6ZT12 1888 aa29.02■■■□□ 2.24
VIM-AS1-202ENST00000605833 MAP2P11137 1827 aaKnown RBP29.01■■■□□ 2.24
VIM-AS1-202ENST00000605833 AMIGO3Q86WK7 504 aa28.99■■■□□ 2.23
VIM-AS1-202ENST00000605833 SMIM5Q71RC9 77 aa28.97■■■□□ 2.23
VIM-AS1-202ENST00000605833 GIGYF1O75420 1035 aaPredicted RBP28.96■■■□□ 2.23
VIM-AS1-202ENST00000605833 PIGBQ92521 554 aa28.96■■■□□ 2.23
VIM-AS1-202ENST00000605833 AK7Q96M32 723 aa28.96■■■□□ 2.23
VIM-AS1-202ENST00000605833 PHF14O94880 888 aa28.95■■■□□ 2.22
VIM-AS1-202ENST00000605833 SMARCC1Q92922 1105 aaPredicted RBP28.95■■■□□ 2.22
VIM-AS1-202ENST00000605833 FLAD1Q8NFF5 587 aa28.94■■■□□ 2.22
VIM-AS1-202ENST00000605833 GRIN3BO60391 1043 aa28.93■■■□□ 2.22
VIM-AS1-202ENST00000605833 SPG7Q9UQ90 795 aa28.92■■■□□ 2.22
VIM-AS1-202ENST00000605833 WASHC2AQ641Q2 1341 aa28.92■■■□□ 2.22
VIM-AS1-202ENST00000605833 EYA1Q99502 592 aa28.91■■■□□ 2.22
VIM-AS1-202ENST00000605833 NKX1-1Q15270 411 aaPredicted RBP28.9■■■□□ 2.22
VIM-AS1-202ENST00000605833 CD2APQ9Y5K6 639 aa28.9■■■□□ 2.22
VIM-AS1-202ENST00000605833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.89■■■□□ 2.22
VIM-AS1-202ENST00000605833 LINC00116Q8NCU8 138 aa28.89■■■□□ 2.22
VIM-AS1-202ENST00000605833 POLR3GLQ9BT43 218 aa28.89■■■□□ 2.22
VIM-AS1-202ENST00000605833 ATP10DQ9P241 1426 aa28.87■■■□□ 2.21
VIM-AS1-202ENST00000605833 LOC102724428A0A0B4J2F2 783 aa28.87■■■□□ 2.21
VIM-AS1-202ENST00000605833 SIK1P57059 783 aa28.87■■■□□ 2.21
VIM-AS1-202ENST00000605833 TMOD3Q9NYL9 352 aa28.87■■■□□ 2.21
VIM-AS1-202ENST00000605833 POLKQ9UBT6 870 aa28.87■■■□□ 2.21
VIM-AS1-202ENST00000605833 WWC3Q9ULE0 1092 aa28.87■■■□□ 2.21
VIM-AS1-202ENST00000605833 HMGB2P26583 209 aaKnown RBP28.86■■■□□ 2.21
VIM-AS1-202ENST00000605833 TNNT2P45379 298 aaPredicted RBP28.86■■■□□ 2.21
VIM-AS1-202ENST00000605833 ASAP1Q9ULH1 1129 aa28.86■■■□□ 2.21
VIM-AS1-202ENST00000605833 PHKG2P15735 406 aa28.84■■■□□ 2.21
VIM-AS1-202ENST00000605833 ITPK1Q13572 414 aa28.84■■■□□ 2.21
VIM-AS1-202ENST00000605833 SSFA2P28290 1259 aa28.82■■■□□ 2.2
VIM-AS1-202ENST00000605833 EIF4A2Q14240 407 aaKnown RBP28.82■■■□□ 2.2
VIM-AS1-202ENST00000605833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.82■■■□□ 2.2
VIM-AS1-202ENST00000605833 IGSF1Q8N6C5 1336 aa28.82■■■□□ 2.2
VIM-AS1-202ENST00000605833 GNPATO15228 680 aa28.81■■■□□ 2.2
VIM-AS1-202ENST00000605833 IFNL2Q8IZJ0 200 aa28.81■■■□□ 2.2
VIM-AS1-202ENST00000605833 ATP6V1AP38606 617 aa28.8■■■□□ 2.2
VIM-AS1-202ENST00000605833 CEP350Q5VT06 3117 aa28.79■■■□□ 2.2
VIM-AS1-202ENST00000605833 ADCY9O60503 1353 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms