RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 BTAF1O14981 1849 aa16.87■□□□□ 0.29
UBE3B-213ENST00000605142 ZNF827Q17R98 1081 aa16.87■□□□□ 0.29
UBE3B-213ENST00000605142 FAM208AQ9UK61 1670 aaKnown RBP16.87■□□□□ 0.29
UBE3B-213ENST00000605142 KAT6BQ8WYB5 2073 aa16.86■□□□□ 0.29
UBE3B-213ENST00000605142 IL2RBP14784 551 aa16.86■□□□□ 0.29
UBE3B-213ENST00000605142 IP6K1Q92551 441 aa16.86■□□□□ 0.29
UBE3B-213ENST00000605142 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
UBE3B-213ENST00000605142 LRRC4BQ9NT99 713 aa16.86■□□□□ 0.29
UBE3B-213ENST00000605142 MAP3K19Q56UN5 1328 aa16.86■□□□□ 0.29
UBE3B-213ENST00000605142 SHANK3Q9BYB0 1731 aa16.85■□□□□ 0.29
UBE3B-213ENST00000605142 KIF20BQ96Q89 1820 aa16.85■□□□□ 0.29
UBE3B-213ENST00000605142 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
UBE3B-213ENST00000605142 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
UBE3B-213ENST00000605142 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
UBE3B-213ENST00000605142 HOXC9P31274 260 aa16.82■□□□□ 0.28
UBE3B-213ENST00000605142 LTV1Q96GA3 475 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-213ENST00000605142 FYB1O15117 783 aa16.8■□□□□ 0.28
UBE3B-213ENST00000605142 COG3Q96JB2 828 aa16.8■□□□□ 0.28
UBE3B-213ENST00000605142 MEGF6O75095 1541 aa16.8■□□□□ 0.28
UBE3B-213ENST00000605142 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
UBE3B-213ENST00000605142 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
UBE3B-213ENST00000605142 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
UBE3B-213ENST00000605142 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
UBE3B-213ENST00000605142 DOT1LQ8TEK3 1739 aa16.77■□□□□ 0.28
UBE3B-213ENST00000605142 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
UBE3B-213ENST00000605142 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
UBE3B-213ENST00000605142 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
UBE3B-213ENST00000605142 NLGN2Q8NFZ4 835 aa16.77■□□□□ 0.28
UBE3B-213ENST00000605142 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
UBE3B-213ENST00000605142 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
UBE3B-213ENST00000605142 NSD2O96028 1365 aa16.77■□□□□ 0.27
UBE3B-213ENST00000605142 YBX3P16989 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBE3B-213ENST00000605142 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
UBE3B-213ENST00000605142 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
UBE3B-213ENST00000605142 AMPHP49418 695 aa16.75■□□□□ 0.27
UBE3B-213ENST00000605142 NBPF6Q5VWK0 638 aa16.75■□□□□ 0.27
UBE3B-213ENST00000605142 NBPF4Q96M43 638 aa16.75■□□□□ 0.27
UBE3B-213ENST00000605142 LY75O60449 1722 aa16.75■□□□□ 0.27
UBE3B-213ENST00000605142 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
UBE3B-213ENST00000605142 TUBGCP6Q96RT7 1819 aa16.75■□□□□ 0.27
UBE3B-213ENST00000605142 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
UBE3B-213ENST00000605142 HSPA6P17066 643 aa16.73■□□□□ 0.27
UBE3B-213ENST00000605142 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
UBE3B-213ENST00000605142 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
UBE3B-213ENST00000605142 KCNQ4P56696 695 aa16.72■□□□□ 0.27
UBE3B-213ENST00000605142 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
UBE3B-213ENST00000605142 GPBP1L1Q9HC44 474 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-213ENST00000605142 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
UBE3B-213ENST00000605142 ADCY9O60503 1353 aa16.72■□□□□ 0.27
UBE3B-213ENST00000605142 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
UBE3B-213ENST00000605142 INSRP06213 1382 aa16.7■□□□□ 0.26
UBE3B-213ENST00000605142 ZCRB1Q8TBF4 217 aaKnown RBP16.7■□□□□ 0.26
UBE3B-213ENST00000605142 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
UBE3B-213ENST00000605142 COL23A1Q86Y22 540 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-213ENST00000605142 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
UBE3B-213ENST00000605142 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-213ENST00000605142 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
UBE3B-213ENST00000605142 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
UBE3B-213ENST00000605142 FLT4P35916 1363 aa16.67■□□□□ 0.26
UBE3B-213ENST00000605142 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-213ENST00000605142 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
UBE3B-213ENST00000605142 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
UBE3B-213ENST00000605142 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
UBE3B-213ENST00000605142 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
UBE3B-213ENST00000605142 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
UBE3B-213ENST00000605142 CYP27B1O15528 508 aa16.64■□□□□ 0.25
UBE3B-213ENST00000605142 ITGB4P16144 1822 aa16.63■□□□□ 0.25
UBE3B-213ENST00000605142 MSH5O43196 834 aa16.62■□□□□ 0.25
UBE3B-213ENST00000605142 RAPGEF4Q8WZA2 1011 aa16.62■□□□□ 0.25
UBE3B-213ENST00000605142 KIF7Q2M1P5 1343 aa16.62■□□□□ 0.25
UBE3B-213ENST00000605142 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
UBE3B-213ENST00000605142 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-213ENST00000605142 PANK3Q9H999 370 aa16.61■□□□□ 0.25
UBE3B-213ENST00000605142 C5P01031 1676 aa16.6■□□□□ 0.25
UBE3B-213ENST00000605142 KIF3CO14782 793 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 APLP1P51693 650 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 PCDH11YQ9BZA8 1340 aa16.59■□□□□ 0.25
UBE3B-213ENST00000605142 EYA1Q99502 592 aa16.58■□□□□ 0.24
UBE3B-213ENST00000605142 AMIGO3Q86WK7 504 aa16.57■□□□□ 0.24
UBE3B-213ENST00000605142 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
UBE3B-213ENST00000605142 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
UBE3B-213ENST00000605142 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
UBE3B-213ENST00000605142 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-213ENST00000605142 NKX1-1Q15270 411 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-213ENST00000605142 MPRIPQ6WCQ1 1025 aa16.55■□□□□ 0.24
UBE3B-213ENST00000605142 DNAJC5GQ8N7S2 189 aa16.55■□□□□ 0.24
UBE3B-213ENST00000605142 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-213ENST00000605142 CICQ96RK0 1608 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-213ENST00000605142 TOMM70O94826 608 aa16.54■□□□□ 0.24
UBE3B-213ENST00000605142 PIGBQ92521 554 aa16.54■□□□□ 0.24
UBE3B-213ENST00000605142 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-213ENST00000605142 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
UBE3B-213ENST00000605142 UBR3Q6ZT12 1888 aa16.53■□□□□ 0.24
UBE3B-213ENST00000605142 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-213ENST00000605142 EIF4A2Q14240 407 aaKnown RBP16.53■□□□□ 0.24
UBE3B-213ENST00000605142 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms