RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PPM1GO15355 546 aaPredicted RBP14.73□□□□□ -0.05
TUBE1-210ENST00000604967 DDX54Q8TDD1 881 aaKnown RBP14.73□□□□□ -0.05
TUBE1-210ENST00000604967 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
TUBE1-210ENST00000604967 RGPD3A6NKT7 1758 aaPredicted RBP14.73□□□□□ -0.05
TUBE1-210ENST00000604967 RGPD4Q7Z3J3 1758 aa14.73□□□□□ -0.05
TUBE1-210ENST00000604967 NSD2O96028 1365 aa14.73□□□□□ -0.05
TUBE1-210ENST00000604967 PLSCR1O15162 318 aa14.72□□□□□ -0.05
TUBE1-210ENST00000604967 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.05
TUBE1-210ENST00000604967 EYA1Q99502 592 aa14.71□□□□□ -0.05
TUBE1-210ENST00000604967 PDGFDQ9GZP0 370 aaPredicted RBP14.71□□□□□ -0.05
TUBE1-210ENST00000604967 BTAF1O14981 1849 aa14.71□□□□□ -0.06
TUBE1-210ENST00000604967 ZCRB1Q8TBF4 217 aaKnown RBP14.7□□□□□ -0.06
TUBE1-210ENST00000604967 CYP27B1O15528 508 aa14.69□□□□□ -0.06
TUBE1-210ENST00000604967 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
TUBE1-210ENST00000604967 TXNRD1Q16881 649 aa14.68□□□□□ -0.06
TUBE1-210ENST00000604967 LRRC4BQ9NT99 713 aa14.68□□□□□ -0.06
TUBE1-210ENST00000604967 TOGARAM1Q9Y4F4 1720 aa14.68□□□□□ -0.06
TUBE1-210ENST00000604967 LRP5O75197 1615 aa14.67□□□□□ -0.06
TUBE1-210ENST00000604967 PAPPAQ13219 1627 aa14.67□□□□□ -0.06
TUBE1-210ENST00000604967 PKD1L3Q7Z443 1732 aa14.67□□□□□ -0.06
TUBE1-210ENST00000604967 PRIM1P49642 420 aaKnown RBP14.67□□□□□ -0.06
TUBE1-210ENST00000604967 KCNQ4P56696 695 aa14.66□□□□□ -0.06
TUBE1-210ENST00000604967 MORC1Q86VD1 984 aa14.66□□□□□ -0.06
TUBE1-210ENST00000604967 KNSTRNQ9Y448 316 aa14.66□□□□□ -0.06
TUBE1-210ENST00000604967 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
TUBE1-210ENST00000604967 AEBP1Q8IUX7 1158 aa14.65□□□□□ -0.06
TUBE1-210ENST00000604967 CASZ1Q86V15 1759 aa14.65□□□□□ -0.06
TUBE1-210ENST00000604967 IGSF1Q8N6C5 1336 aa14.65□□□□□ -0.06
TUBE1-210ENST00000604967 RAPGEF4Q8WZA2 1011 aa14.64□□□□□ -0.07
TUBE1-210ENST00000604967 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
TUBE1-210ENST00000604967 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
TUBE1-210ENST00000604967 IL13P35225 146 aa14.62□□□□□ -0.07
TUBE1-210ENST00000604967 SYTL4Q96C24 671 aaPredicted RBP14.61□□□□□ -0.07
TUBE1-210ENST00000604967 MTHFSP49914 203 aa14.6□□□□□ -0.07
TUBE1-210ENST00000604967 NKX1-1Q15270 411 aaPredicted RBP14.6□□□□□ -0.07
TUBE1-210ENST00000604967 COL3A1P02461 1466 aaPredicted RBP14.6□□□□□ -0.07
TUBE1-210ENST00000604967 LY75O60449 1722 aa14.6□□□□□ -0.07
TUBE1-210ENST00000604967 PCDH11XQ9BZA7 1347 aa14.6□□□□□ -0.07
TUBE1-210ENST00000604967 PCDH11YQ9BZA8 1340 aa14.6□□□□□ -0.07
TUBE1-210ENST00000604967 KAT6BQ8WYB5 2073 aa14.59□□□□□ -0.07
TUBE1-210ENST00000604967 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
TUBE1-210ENST00000604967 SLC15A2Q16348 729 aa14.59□□□□□ -0.07
TUBE1-210ENST00000604967 NBPF14Q5TI25 921 aa14.59□□□□□ -0.07
TUBE1-210ENST00000604967 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
TUBE1-210ENST00000604967 PHKG2P15735 406 aa14.58□□□□□ -0.08
TUBE1-210ENST00000604967 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
TUBE1-210ENST00000604967 KDRP35968 1356 aa14.58□□□□□ -0.08
TUBE1-210ENST00000604967 ITGB4P16144 1822 aa14.57□□□□□ -0.08
TUBE1-210ENST00000604967 PIGBQ92521 554 aa14.57□□□□□ -0.08
TUBE1-210ENST00000604967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.08
TUBE1-210ENST00000604967 PTGER2P43116 358 aa14.56□□□□□ -0.08
TUBE1-210ENST00000604967 TUBGCP6Q96RT7 1819 aa14.56□□□□□ -0.08
TUBE1-210ENST00000604967 KDM6AO15550 1401 aaPredicted RBP14.56□□□□□ -0.08
TUBE1-210ENST00000604967 ZBTB7AO95365 584 aa14.55□□□□□ -0.08
TUBE1-210ENST00000604967 SULT6B1Q6IMI4 303 aa14.55□□□□□ -0.08
TUBE1-210ENST00000604967 MPRIPQ6WCQ1 1025 aa14.55□□□□□ -0.08
TUBE1-210ENST00000604967 AMIGO3Q86WK7 504 aa14.55□□□□□ -0.08
TUBE1-210ENST00000604967 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
TUBE1-210ENST00000604967 STK32BQ9NY57 414 aa14.54□□□□□ -0.08
TUBE1-210ENST00000604967 PALLDQ8WX93 1383 aa14.53□□□□□ -0.08
TUBE1-210ENST00000604967 PNPLA7Q6ZV29 1317 aa14.53□□□□□ -0.08
TUBE1-210ENST00000604967 SGIP1Q9BQI5 828 aa14.53□□□□□ -0.08
TUBE1-210ENST00000604967 HMOX1P09601 288 aa14.52□□□□□ -0.09
TUBE1-210ENST00000604967 SLC27A3Q5K4L6 730 aa14.52□□□□□ -0.09
TUBE1-210ENST00000604967 SMIM5Q71RC9 77 aa14.52□□□□□ -0.09
TUBE1-210ENST00000604967 SLC4A9Q96Q91 983 aa14.52□□□□□ -0.09
TUBE1-210ENST00000604967 ASAP1Q9ULH1 1129 aa14.52□□□□□ -0.09
TUBE1-210ENST00000604967 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
TUBE1-210ENST00000604967 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
TUBE1-210ENST00000604967 IFNL2Q8IZJ0 200 aa14.51□□□□□ -0.09
TUBE1-210ENST00000604967 CCNL1Q9UK58 526 aaPredicted RBP14.51□□□□□ -0.09
TUBE1-210ENST00000604967 ITPK1Q13572 414 aa14.5□□□□□ -0.09
TUBE1-210ENST00000604967 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-210ENST00000604967 SPON1Q9HCB6 807 aa14.5□□□□□ -0.09
TUBE1-210ENST00000604967 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
TUBE1-210ENST00000604967 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
TUBE1-210ENST00000604967 QSER1Q2KHR3 1735 aa14.49□□□□□ -0.09
TUBE1-210ENST00000604967 C5P01031 1676 aa14.49□□□□□ -0.09
TUBE1-210ENST00000604967 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
TUBE1-210ENST00000604967 PPP2R1AP30153 589 aa14.48□□□□□ -0.09
TUBE1-210ENST00000604967 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
TUBE1-210ENST00000604967 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
TUBE1-210ENST00000604967 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
TUBE1-210ENST00000604967 LGR6Q9HBX8 967 aa14.47□□□□□ -0.09
TUBE1-210ENST00000604967 TMOD3Q9NYL9 352 aa14.47□□□□□ -0.09
TUBE1-210ENST00000604967 COL24A1Q17RW2 1714 aa14.46□□□□□ -0.09
TUBE1-210ENST00000604967 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
TUBE1-210ENST00000604967 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.09
TUBE1-210ENST00000604967 DCAF5Q96JK2 942 aa14.46□□□□□ -0.09
TUBE1-210ENST00000604967 MTFR1LQ9H019 292 aa14.46□□□□□ -0.09
TUBE1-210ENST00000604967 C4BP0C0L5 1744 aa14.46□□□□□ -0.1
TUBE1-210ENST00000604967 LOC102724428A0A0B4J2F2 783 aa14.45□□□□□ -0.1
TUBE1-210ENST00000604967 ERVV-2B6SEH9 535 aa14.45□□□□□ -0.1
TUBE1-210ENST00000604967 SIK1P57059 783 aa14.45□□□□□ -0.1
TUBE1-210ENST00000604967 ADAMTS7Q9UKP4 1686 aa14.45□□□□□ -0.1
TUBE1-210ENST00000604967 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
TUBE1-210ENST00000604967 TFCP2L1Q9NZI6 479 aa14.44□□□□□ -0.1
TUBE1-210ENST00000604967 SCN11AQ9UI33 1791 aa14.44□□□□□ -0.1
TUBE1-210ENST00000604967 NFATC2IPQ8NCF5 419 aa14.43□□□□□ -0.1
TUBE1-210ENST00000604967 SMARCC1Q92922 1105 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms