RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 ABCC2Q92887 1545 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 ADCY10Q96PN6 1610 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 E9PSI1 815 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 PTMSP20962 102 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 CALD1Q05682 793 aaKnown RBP8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 PDE3AQ14432 1141 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 SHANK2Q9UPX8 1470 aa8.11□□□□□ -1.11
SRGAP2-211ENST00000604423 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 TLL1O43897 1013 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 BCAR3O75815 825 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 MSNP26038 577 aaKnown RBP8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 KIAA0556O60303 1618 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 URB2Q14146 1524 aaKnown RBP8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 TROQ12816 1431 aaPredicted RBP8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 NUP153P49790 1475 aaKnown RBP8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 CDC42BPAQ5VT25 1732 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 PPP2R1AP30153 589 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 GBP4Q96PP9 640 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 C9orf84Q5VXU9 1444 aa8.1□□□□□ -1.11
SRGAP2-211ENST00000604423 GPRASP1Q5JY77 1395 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 ZMYND10O75800 440 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 CCDC173Q0VFZ6 552 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 AAMPQ13685 434 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 SYNMO15061 1565 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 ADAMTS12P58397 1594 aa8.09□□□□□ -1.11
SRGAP2-211ENST00000604423 GPATCH8Q9UKJ3 1502 aaKnown RBP8.09□□□□□ -1.12
SRGAP2-211ENST00000604423 ZPR1O75312 459 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 CCDC146Q8IYE0 955 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 PIK3C2GO75747 1445 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 FAM135AQ9P2D6 1515 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 FUT2Q10981 343 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 SKOR2Q2VWA4 1001 aaPredicted RBP8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 C22orf23Q9BZE7 217 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 ASXL1Q8IXJ9 1541 aa8.08□□□□□ -1.12
SRGAP2-211ENST00000604423 MFAP1P55081 439 aaKnown RBP8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 PPP1R18Q6NYC8 613 aa8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 BARGINQ6ZT62 677 aa8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 RNF17Q9BXT8 1623 aaKnown RBP8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 PRG4Q92954 1404 aaPredicted RBP8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 TRMT2AQ8IZ69 625 aaKnown RBP8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 NGEFQ8N5V2 710 aa8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 PANK1Q8TE04 598 aa8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 TESK2Q96S53 571 aa8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 RWDD1Q9H446 243 aaPredicted RBP8.07□□□□□ -1.12
SRGAP2-211ENST00000604423 PTPRGP23470 1445 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 APAF1O14727 1248 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 NBPF1Q3BBV0 1214 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 RGL3Q3MIN7 710 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 ZSCAN30Q86W11 494 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 NUP160Q12769 1436 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 SCAPERQ9BY12 1400 aa8.06□□□□□ -1.12
SRGAP2-211ENST00000604423 A2MP01023 1474 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 CCDC141Q6ZP82 1450 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 GOLGA6L22H0YM25 854 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 HSP90AB1P08238 724 aaKnown RBP8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 NASPP49321 788 aaPredicted RBP8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 TSPY4P0CV99 314 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 TSPY10P0CW01 314 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 TERF1P54274 439 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 CDCA8Q53HL2 280 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 MTERF4Q7Z6M4 381 aaKnown RBP8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 REPIN1Q9BWE0 567 aaKnown RBP8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 GPCPD1Q9NPB8 672 aa8.05□□□□□ -1.12
SRGAP2-211ENST00000604423 MAGI2Q86UL8 1455 aa8.04□□□□□ -1.12
SRGAP2-211ENST00000604423 TARBP1Q13395 1621 aaKnown RBP8.04□□□□□ -1.12
SRGAP2-211ENST00000604423 GCGRP47871 477 aa8.04□□□□□ -1.12
SRGAP2-211ENST00000604423 RBM10P98175 930 aaKnown RBP8.04□□□□□ -1.12
SRGAP2-211ENST00000604423 RTEL1-TNFRSF6BF6WH68 1400 aa8.04□□□□□ -1.12
SRGAP2-211ENST00000604423 WDR7Q9Y4E6 1490 aa8.04□□□□□ -1.12
SRGAP2-211ENST00000604423 OFD1O75665 1012 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 FAM13BQ9NYF5 915 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 CD46P15529 392 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 KDM5AP29375 1690 aaKnown RBP8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 IQGAP1P46940 1657 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 SHROOM2Q13796 1616 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 TNPO1Q92973 898 aaKnown RBP8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 NCOA3Q9Y6Q9 1424 aa8.03□□□□□ -1.12
SRGAP2-211ENST00000604423 MYOM1P52179 1685 aa8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 DISP1Q96F81 1524 aa8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 NR1I2O75469 434 aa8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 PPP1R9BQ96SB3 815 aa8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 R3HCC1Q9Y3T6 440 aaKnown RBP8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 S1PR4O95977 384 aa8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 FTSJ3Q8IY81 847 aaKnown RBP8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 HLA-CQ95604 372 aa8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
SRGAP2-211ENST00000604423 ARHGEF5Q12774 1597 aa8.01□□□□□ -1.13
SRGAP2-211ENST00000604423 UQCRHLA0A096LP55 91 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms