RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.9□□□□□ -1.47
LINC01109-201ENST00000603837 CUL7Q14999 1698 aa5.9□□□□□ -1.47
LINC01109-201ENST00000603837 CREB3O43889 395 aa5.89□□□□□ -1.47
LINC01109-201ENST00000603837 HDGFP51858 240 aaKnown RBP5.89□□□□□ -1.47
LINC01109-201ENST00000603837 NLRP7Q8WX94 980 aa5.89□□□□□ -1.47
LINC01109-201ENST00000603837 TRIM44Q96DX7 344 aaPredicted RBP5.89□□□□□ -1.47
LINC01109-201ENST00000603837 ATP1B4Q9UN42 357 aaPredicted RBP5.89□□□□□ -1.47
LINC01109-201ENST00000603837 TRIM66O15016 1216 aa5.89□□□□□ -1.47
LINC01109-201ENST00000603837 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
LINC01109-201ENST00000603837 ZNF280DQ6N043 979 aa5.89□□□□□ -1.47
LINC01109-201ENST00000603837 SPOCK3Q9BQ16 436 aa5.89□□□□□ -1.47
LINC01109-201ENST00000603837 CARD10Q9BWT7 1032 aa5.89□□□□□ -1.47
LINC01109-201ENST00000603837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.88□□□□□ -1.47
LINC01109-201ENST00000603837 MS4A1P11836 297 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 SCP2P22307 547 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 TERF1P54274 439 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 SPNS2Q8IVW8 549 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 PANK2Q9BZ23 570 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 AQRO60306 1485 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC01109-201ENST00000603837 ERBB4Q15303 1308 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 LMOD3Q0VAK6 560 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 LONRF3Q496Y0 759 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 MRRFQ96E11 262 aaKnown RBP5.88□□□□□ -1.47
LINC01109-201ENST00000603837 CTDP1Q9Y5B0 961 aaPredicted RBP5.88□□□□□ -1.47
LINC01109-201ENST00000603837 IGF1RP08069 1367 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 STK26Q9P289 416 aa5.88□□□□□ -1.47
LINC01109-201ENST00000603837 KIF13AQ9H1H9 1805 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 CASC1Q6TDU7 716 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 SAMD7Q7Z3H4 446 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 ANKK1Q8NFD2 765 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 WNT2BQ93097 391 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 TMEM134Q9H6X4 195 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 ARHGAP35Q9NRY4 1499 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 MDM2Q00987 491 aaPredicted RBP5.87□□□□□ -1.47
LINC01109-201ENST00000603837 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.87□□□□□ -1.47
LINC01109-201ENST00000603837 CHMP4CQ96CF2 233 aa5.87□□□□□ -1.47
LINC01109-201ENST00000603837 CCDC94Q9BW85 323 aaPredicted RBP5.87□□□□□ -1.47
LINC01109-201ENST00000603837 CGNQ9P2M7 1197 aaKnown RBP5.87□□□□□ -1.47
LINC01109-201ENST00000603837 CARMIL1Q5VZK9 1371 aa5.86□□□□□ -1.47
LINC01109-201ENST00000603837 TTLL12Q14166 644 aaPredicted RBP5.86□□□□□ -1.47
LINC01109-201ENST00000603837 SWT1Q5T5J6 900 aaKnown RBP5.86□□□□□ -1.47
LINC01109-201ENST00000603837 KCTD12Q96CX2 325 aaKnown RBP5.86□□□□□ -1.47
LINC01109-201ENST00000603837 AMHR2Q16671 573 aa5.86□□□□□ -1.47
LINC01109-201ENST00000603837 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
LINC01109-201ENST00000603837 LRCH3Q96II8 777 aa5.86□□□□□ -1.47
LINC01109-201ENST00000603837 TIAM1Q13009 1591 aa5.86□□□□□ -1.47
LINC01109-201ENST00000603837 FSD2A1L4K1 749 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 RNF40O75150 1001 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 OFD1O75665 1012 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 CSB-PGBD3P0DP91 1061 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 PDE4DQ08499 809 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 SKIV2LQ15477 1246 aaKnown RBP5.85□□□□□ -1.47
LINC01109-201ENST00000603837 NBPF20Q3BBV1 942 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 ZKSCAN2Q63HK3 967 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 TMC1Q8TDI8 760 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 CCDC97Q96F63 343 aaPredicted RBP5.85□□□□□ -1.47
LINC01109-201ENST00000603837 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.85□□□□□ -1.47
LINC01109-201ENST00000603837 ZNF608Q9ULD9 1512 aaPredicted RBP5.85□□□□□ -1.47
LINC01109-201ENST00000603837 ZNF500O60304 480 aaPredicted RBP5.85□□□□□ -1.47
LINC01109-201ENST00000603837 SLC20A2Q08357 652 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 PROCA1Q8NCQ7 364 aaPredicted RBP5.85□□□□□ -1.47
LINC01109-201ENST00000603837 GPCPD1Q9NPB8 672 aa5.85□□□□□ -1.47
LINC01109-201ENST00000603837 SOWAHBA6NEL2 793 aa5.84□□□□□ -1.47
LINC01109-201ENST00000603837 MRE11P49959 708 aa5.84□□□□□ -1.47
LINC01109-201ENST00000603837 TTC30BQ8N4P2 665 aa5.84□□□□□ -1.47
LINC01109-201ENST00000603837 BCAMP50895 628 aa5.84□□□□□ -1.47
LINC01109-201ENST00000603837 OTUD6BQ8N6M0 293 aa5.84□□□□□ -1.47
LINC01109-201ENST00000603837 IVNS1ABPQ9Y6Y0 642 aa5.84□□□□□ -1.47
LINC01109-201ENST00000603837 UHRF1BP1LA0JNW5 1464 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 KIAA0586Q9BVV6 1533 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 UQCRHLA0A096LP55 91 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 WDHD1O75717 1129 aaPredicted RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 UQCRHP07919 91 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 KCNA1Q09470 495 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 DDX46Q7L014 1031 aaKnown RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 SLF2Q8IX21 1173 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 PARP9Q8IXQ6 854 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 RNF166Q96A37 237 aaPredicted RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 REPIN1Q9BWE0 567 aaKnown RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 RPGRIP1LQ68CZ1 1315 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 DYNC1I1O14576 645 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 SDR16C5Q8N3Y7 309 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 MORC4Q8TE76 937 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 DRC1Q96MC2 740 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 R3HCC1Q9Y3T6 440 aaKnown RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 ZBED9Q6R2W3 1325 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 FHAD1B1AJZ9 1412 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 DDX11L8A8MPP1 907 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 GIGYF2Q6Y7W6 1299 aaKnown RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 THSD4Q6ZMP0 1018 aa5.83□□□□□ -1.48
LINC01109-201ENST00000603837 G3BP2Q9UN86 482 aaKnown RBP5.83□□□□□ -1.48
LINC01109-201ENST00000603837 AKNAQ7Z591 1439 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 GAPVD1Q14C86 1478 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 SNAPC4Q5SXM2 1469 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 STK10O94804 968 aaKnown RBP5.82□□□□□ -1.48
LINC01109-201ENST00000603837 SULF1Q8IWU6 871 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 CEP170Q5SW79 1584 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 MMRN1Q13201 1228 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 C11orf96Q7Z7L8 435 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms