RNA–Protein interactions for RNA: ENST00000603368.1

AC004840.2-201, humanhuman

BASIC

Gene AC004840.2, Length 285 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004840.2-201ENST00000603368 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
AC004840.2-201ENST00000603368 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
AC004840.2-201ENST00000603368 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
AC004840.2-201ENST00000603368 USP47Q96K76 1375 aa12.73□□□□□ -0.37
AC004840.2-201ENST00000603368 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
AC004840.2-201ENST00000603368 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
AC004840.2-201ENST00000603368 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
AC004840.2-201ENST00000603368 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
AC004840.2-201ENST00000603368 RTL1A6NKG5 1358 aa12.72□□□□□ -0.37
AC004840.2-201ENST00000603368 PPM1GO15355 546 aaPredicted RBP12.72□□□□□ -0.37
AC004840.2-201ENST00000603368 KCNQ4P56696 695 aa12.72□□□□□ -0.37
AC004840.2-201ENST00000603368 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
AC004840.2-201ENST00000603368 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
AC004840.2-201ENST00000603368 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
AC004840.2-201ENST00000603368 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
AC004840.2-201ENST00000603368 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
AC004840.2-201ENST00000603368 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
AC004840.2-201ENST00000603368 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 UTRNP46939 3433 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 ZNF784Q8NCA9 323 aaPredicted RBP12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 INSRP06213 1382 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 FLT4P35916 1363 aa12.69□□□□□ -0.38
AC004840.2-201ENST00000603368 BTAF1O14981 1849 aa12.68□□□□□ -0.38
AC004840.2-201ENST00000603368 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
AC004840.2-201ENST00000603368 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
AC004840.2-201ENST00000603368 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
AC004840.2-201ENST00000603368 MYOM1P52179 1685 aa12.67□□□□□ -0.38
AC004840.2-201ENST00000603368 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
AC004840.2-201ENST00000603368 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
AC004840.2-201ENST00000603368 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
AC004840.2-201ENST00000603368 CARD14Q9BXL6 1004 aa12.66□□□□□ -0.38
AC004840.2-201ENST00000603368 PCGF6Q9BYE7 350 aa12.66□□□□□ -0.38
AC004840.2-201ENST00000603368 MEGF6O75095 1541 aa12.66□□□□□ -0.38
AC004840.2-201ENST00000603368 GRIN3BO60391 1043 aa12.65□□□□□ -0.38
AC004840.2-201ENST00000603368 COL23A1Q86Y22 540 aaPredicted RBP12.65□□□□□ -0.38
AC004840.2-201ENST00000603368 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
AC004840.2-201ENST00000603368 AK7Q96M32 723 aa12.64□□□□□ -0.39
AC004840.2-201ENST00000603368 NSD2O96028 1365 aa12.64□□□□□ -0.39
AC004840.2-201ENST00000603368 NSD3Q9BZ95 1437 aa12.63□□□□□ -0.39
AC004840.2-201ENST00000603368 CYP27B1O15528 508 aa12.63□□□□□ -0.39
AC004840.2-201ENST00000603368 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
AC004840.2-201ENST00000603368 PALLDQ8WX93 1383 aa12.63□□□□□ -0.39
AC004840.2-201ENST00000603368 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
AC004840.2-201ENST00000603368 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
AC004840.2-201ENST00000603368 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
AC004840.2-201ENST00000603368 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
AC004840.2-201ENST00000603368 NLGN2Q8NFZ4 835 aa12.61□□□□□ -0.39
AC004840.2-201ENST00000603368 PIGBQ92521 554 aa12.61□□□□□ -0.39
AC004840.2-201ENST00000603368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
AC004840.2-201ENST00000603368 CLSPNQ9HAW4 1339 aa12.61□□□□□ -0.39
AC004840.2-201ENST00000603368 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
AC004840.2-201ENST00000603368 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
AC004840.2-201ENST00000603368 EYA1Q99502 592 aa12.6□□□□□ -0.39
AC004840.2-201ENST00000603368 CD2APQ9Y5K6 639 aa12.6□□□□□ -0.39
AC004840.2-201ENST00000603368 PHF14O94880 888 aa12.59□□□□□ -0.39
AC004840.2-201ENST00000603368 C1QTNF8P60827 252 aa12.59□□□□□ -0.39
AC004840.2-201ENST00000603368 EIF4G2P78344 907 aaKnown RBP eCLIP12.59□□□□□ -0.39
AC004840.2-201ENST00000603368 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
AC004840.2-201ENST00000603368 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
AC004840.2-201ENST00000603368 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
AC004840.2-201ENST00000603368 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
AC004840.2-201ENST00000603368 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
AC004840.2-201ENST00000603368 SIK1P57059 783 aa12.58□□□□□ -0.4
AC004840.2-201ENST00000603368 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
AC004840.2-201ENST00000603368 RGPD2P0DJD1 1756 aa12.57□□□□□ -0.4
AC004840.2-201ENST00000603368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
AC004840.2-201ENST00000603368 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
AC004840.2-201ENST00000603368 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
AC004840.2-201ENST00000603368 PHKG2P15735 406 aa12.56□□□□□ -0.4
AC004840.2-201ENST00000603368 SSFA2P28290 1259 aa12.56□□□□□ -0.4
AC004840.2-201ENST00000603368 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
AC004840.2-201ENST00000603368 PANK3Q9H999 370 aa12.56□□□□□ -0.4
AC004840.2-201ENST00000603368 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
AC004840.2-201ENST00000603368 LY75O60449 1722 aa12.55□□□□□ -0.4
AC004840.2-201ENST00000603368 GNPATO15228 680 aa12.55□□□□□ -0.4
AC004840.2-201ENST00000603368 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
AC004840.2-201ENST00000603368 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
AC004840.2-201ENST00000603368 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 ERVV-2B6SEH9 535 aa12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 TRAPPC3LQ5T215 181 aa12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 CCER1Q8TC90 406 aaPredicted RBP12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
AC004840.2-201ENST00000603368 CHD4Q14839 1912 aa12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 HSPA5P11021 654 aaKnown RBP12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
AC004840.2-201ENST00000603368 CABP4P57796 275 aa12.52□□□□□ -0.41
AC004840.2-201ENST00000603368 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.41
AC004840.2-201ENST00000603368 SMIM5Q71RC9 77 aa12.52□□□□□ -0.41
AC004840.2-201ENST00000603368 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms