RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ERBB3P21860 1342 aa28.69■■■□□ 2.18
PPFIA3-211ENST00000602848 CHL1O00533 1208 aa28.69■■■□□ 2.18
PPFIA3-211ENST00000602848 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 PLEKHG5O94827 1062 aa28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 HAP1P54257 671 aaPredicted RBP28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 AMOTQ4VCS5 1084 aa28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 LRRC59Q96AG4 307 aaKnown RBP28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 CCDC136Q96JN2 1154 aa28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 CRBNQ96SW2 442 aa28.68■■■□□ 2.18
PPFIA3-211ENST00000602848 CRB1P82279 1406 aa28.67■■■□□ 2.18
PPFIA3-211ENST00000602848 MS4A1P11836 297 aa28.66■■■□□ 2.18
PPFIA3-211ENST00000602848 DCTN1Q14203 1278 aa28.66■■■□□ 2.18
PPFIA3-211ENST00000602848 PLEKHO1Q53GL0 409 aaPredicted RBP28.66■■■□□ 2.18
PPFIA3-211ENST00000602848 CABLES1Q8TDN4 633 aa28.66■■■□□ 2.18
PPFIA3-211ENST00000602848 MAP3K5Q99683 1374 aa28.66■■■□□ 2.18
PPFIA3-211ENST00000602848 LMO7Q8WWI1 1683 aa28.66■■■□□ 2.18
PPFIA3-211ENST00000602848 CANXP27824 592 aaKnown RBP28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 BRPF1P55201 1214 aaPredicted RBP28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 MCM10Q7L590 875 aa28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 USHBP1Q8N6Y0 703 aa28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 BABAM1Q9NWV8 329 aa28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 JCADQ9P266 1359 aa28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 FAM208AQ9UK61 1670 aaKnown RBP28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 C20orf194Q5TEA3 1177 aa28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 B4GALNT3Q6L9W6 998 aa28.65■■■□□ 2.18
PPFIA3-211ENST00000602848 RGPD2P0DJD1 1756 aa28.64■■■□□ 2.18
PPFIA3-211ENST00000602848 RGPD5Q99666 1765 aa28.64■■■□□ 2.17
PPFIA3-211ENST00000602848 COL22A1Q8NFW1 1626 aaPredicted RBP28.63■■■□□ 2.17
PPFIA3-211ENST00000602848 KIAA0232Q92628 1395 aa28.62■■■□□ 2.17
PPFIA3-211ENST00000602848 VAMP4O75379 141 aa28.61■■■□□ 2.17
PPFIA3-211ENST00000602848 AAMPQ13685 434 aa28.61■■■□□ 2.17
PPFIA3-211ENST00000602848 SMC4Q9NTJ3 1288 aa28.61■■■□□ 2.17
PPFIA3-211ENST00000602848 SSH1Q8WYL5 1049 aa28.61■■■□□ 2.17
PPFIA3-211ENST00000602848 ZKSCAN2Q63HK3 967 aa28.6■■■□□ 2.17
PPFIA3-211ENST00000602848 LRRC37A3O60309 1634 aa28.6■■■□□ 2.17
PPFIA3-211ENST00000602848 KIF16BQ96L93 1317 aa28.59■■■□□ 2.17
PPFIA3-211ENST00000602848 FRAT1Q92837 279 aaPredicted RBP28.59■■■□□ 2.17
PPFIA3-211ENST00000602848 IPO8O15397 1037 aaKnown RBP28.58■■■□□ 2.17
PPFIA3-211ENST00000602848 TWISTNBQ3B726 338 aaPredicted RBP28.58■■■□□ 2.17
PPFIA3-211ENST00000602848 AKAP4Q5JQC9 854 aa28.58■■■□□ 2.17
PPFIA3-211ENST00000602848 ABCA3Q99758 1704 aa28.56■■■□□ 2.16
PPFIA3-211ENST00000602848 PRDM11Q9NQV5 511 aa28.56■■■□□ 2.16
PPFIA3-211ENST00000602848 BCL2L13Q9BXK5 485 aa28.55■■■□□ 2.16
PPFIA3-211ENST00000602848 NLRP2Q9NX02 1062 aa28.55■■■□□ 2.16
PPFIA3-211ENST00000602848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.55■■■□□ 2.16
PPFIA3-211ENST00000602848 IL17REQ8NFR9 667 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 CEMIPQ8WUJ3 1361 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 SOS1Q07889 1333 aaPredicted RBP28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 OVOS2A0A0G2JMS6 1433 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 CSB-PGBD3P0DP91 1061 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 CHRNA2Q15822 529 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 C8orf58Q8NAV2 365 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 RAPGEF4Q8WZA2 1011 aa28.54■■■□□ 2.16
PPFIA3-211ENST00000602848 TAF7Q15545 349 aaPredicted RBP28.53■■■□□ 2.16
PPFIA3-211ENST00000602848 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
PPFIA3-211ENST00000602848 TSPYL6Q8N831 410 aa28.52■■■□□ 2.16
PPFIA3-211ENST00000602848 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
PPFIA3-211ENST00000602848 TSPYL4Q9UJ04 414 aa28.52■■■□□ 2.16
PPFIA3-211ENST00000602848 LRP6O75581 1613 aa28.52■■■□□ 2.16
PPFIA3-211ENST00000602848 C1orf141Q5JVX7 400 aa28.51■■■□□ 2.15
PPFIA3-211ENST00000602848 SPATA31A6Q5VVP1 1343 aa28.51■■■□□ 2.15
PPFIA3-211ENST00000602848 TATP17735 454 aaPredicted RBP28.51■■■□□ 2.15
PPFIA3-211ENST00000602848 ATF7IPQ6VMQ6 1270 aa28.51■■■□□ 2.15
PPFIA3-211ENST00000602848 DZIP1LQ8IYY4 767 aaKnown RBP28.51■■■□□ 2.15
PPFIA3-211ENST00000602848 MRPL50Q8N5N7 158 aaKnown RBP28.49■■■□□ 2.15
PPFIA3-211ENST00000602848 PANK1Q8TE04 598 aa28.49■■■□□ 2.15
PPFIA3-211ENST00000602848 WDR17Q8IZU2 1322 aa28.49■■■□□ 2.15
PPFIA3-211ENST00000602848 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
PPFIA3-211ENST00000602848 SPG7Q9UQ90 795 aa28.48■■■□□ 2.15
PPFIA3-211ENST00000602848 FTSJ3Q8IY81 847 aaKnown RBP28.46■■■□□ 2.15
PPFIA3-211ENST00000602848 ELL2O00472 640 aaPredicted RBP28.45■■■□□ 2.14
PPFIA3-211ENST00000602848 TRIM27P14373 513 aa28.45■■■□□ 2.14
PPFIA3-211ENST00000602848 COG6Q9Y2V7 657 aa28.45■■■□□ 2.14
PPFIA3-211ENST00000602848 COL5A2P05997 1499 aaPredicted RBP28.44■■■□□ 2.14
PPFIA3-211ENST00000602848 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 NUTM2BA6NNL0 878 aaPredicted RBP28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 NUTM2EB1AL46 878 aaPredicted RBP28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 RNMTO43148 476 aaKnown RBP28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 RLBP1P12271 317 aa28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 NUTM2AQ8IVF1 878 aaPredicted RBP28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 CHMP4AQ9BY43 222 aa28.43■■■□□ 2.14
PPFIA3-211ENST00000602848 ADAMTS7Q9UKP4 1686 aa28.42■■■□□ 2.14
PPFIA3-211ENST00000602848 TEFQ10587 303 aa28.41■■■□□ 2.14
PPFIA3-211ENST00000602848 CLUAP1Q96AJ1 413 aa28.41■■■□□ 2.14
PPFIA3-211ENST00000602848 MIS18AQ9NYP9 233 aa28.41■■■□□ 2.14
PPFIA3-211ENST00000602848 CARD10Q9BWT7 1032 aa28.4■■■□□ 2.14
PPFIA3-211ENST00000602848 LGR6Q9HBX8 967 aa28.4■■■□□ 2.14
PPFIA3-211ENST00000602848 API5Q9BZZ5 524 aaKnown RBP28.4■■■□□ 2.14
PPFIA3-211ENST00000602848 DDX19BQ9UMR2 479 aa28.4■■■□□ 2.14
PPFIA3-211ENST00000602848 TOM1L2Q6ZVM7 507 aa28.39■■■□□ 2.13
PPFIA3-211ENST00000602848 CENPQQ7L2Z9 268 aaPredicted RBP28.39■■■□□ 2.13
PPFIA3-211ENST00000602848 CHMP4BQ9H444 224 aaKnown RBP28.39■■■□□ 2.13
PPFIA3-211ENST00000602848 MEGF6O75095 1541 aa28.38■■■□□ 2.13
PPFIA3-211ENST00000602848 IFNL2Q8IZJ0 200 aa28.38■■■□□ 2.13
PPFIA3-211ENST00000602848 PKD1L3Q7Z443 1732 aa28.38■■■□□ 2.13
PPFIA3-211ENST00000602848 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
PPFIA3-211ENST00000602848 EVA1CP58658 441 aa28.37■■■□□ 2.13
PPFIA3-211ENST00000602848 MPRIPQ6WCQ1 1025 aa28.37■■■□□ 2.13
PPFIA3-211ENST00000602848 TNNQ9UQP3 1299 aa28.37■■■□□ 2.13
PPFIA3-211ENST00000602848 COL14A1Q05707 1796 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms