RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 PKD1L3Q7Z443 1732 aa30.2■■■□□ 2.43
UBE2E3-206ENST00000602479 NBPF6Q5VWK0 638 aa30.2■■■□□ 2.43
UBE2E3-206ENST00000602479 NBPF4Q96M43 638 aa30.2■■■□□ 2.43
UBE2E3-206ENST00000602479 STK32BQ9NY57 414 aa30.19■■■□□ 2.42
UBE2E3-206ENST00000602479 SLC15A2Q16348 729 aa30.18■■■□□ 2.42
UBE2E3-206ENST00000602479 HSP90AB2PQ58FF8 381 aa30.17■■■□□ 2.42
UBE2E3-206ENST00000602479 USHBP1Q8N6Y0 703 aa30.17■■■□□ 2.42
UBE2E3-206ENST00000602479 ZCRB1Q8TBF4 217 aaKnown RBP30.16■■■□□ 2.42
UBE2E3-206ENST00000602479 NSD2O96028 1365 aa30.15■■■□□ 2.42
UBE2E3-206ENST00000602479 PPP1R1BQ9UD71 204 aaPredicted RBP30.14■■■□□ 2.42
UBE2E3-206ENST00000602479 CGNL1Q0VF96 1302 aa30.14■■■□□ 2.42
UBE2E3-206ENST00000602479 TOGARAM1Q9Y4F4 1720 aa30.13■■■□□ 2.41
UBE2E3-206ENST00000602479 ITGB4P16144 1822 aa30.13■■■□□ 2.41
UBE2E3-206ENST00000602479 CCER1Q8TC90 406 aaPredicted RBP30.13■■■□□ 2.41
UBE2E3-206ENST00000602479 EMILIN1Q9Y6C2 1016 aa30.13■■■□□ 2.41
UBE2E3-206ENST00000602479 NCAPD2Q15021 1401 aa30.12■■■□□ 2.41
UBE2E3-206ENST00000602479 ZBTB7AO95365 584 aa30.11■■■□□ 2.41
UBE2E3-206ENST00000602479 LRRC4BQ9NT99 713 aa30.11■■■□□ 2.41
UBE2E3-206ENST00000602479 RAPGEF4Q8WZA2 1011 aa30.1■■■□□ 2.41
UBE2E3-206ENST00000602479 EIF4G2P78344 907 aaKnown RBP eCLIP30.09■■■□□ 2.41
UBE2E3-206ENST00000602479 COL24A1Q17RW2 1714 aa30.09■■■□□ 2.41
UBE2E3-206ENST00000602479 HSPA5P11021 654 aaKnown RBP30.08■■■□□ 2.41
UBE2E3-206ENST00000602479 PRIM1P49642 420 aaKnown RBP30.08■■■□□ 2.41
UBE2E3-206ENST00000602479 PTGER2P43116 358 aa30.07■■■□□ 2.4
UBE2E3-206ENST00000602479 ZNF827Q17R98 1081 aa30.07■■■□□ 2.4
UBE2E3-206ENST00000602479 SYTL4Q96C24 671 aaPredicted RBP30.07■■■□□ 2.4
UBE2E3-206ENST00000602479 TAF1LQ8IZX4 1826 aa30.07■■■□□ 2.4
UBE2E3-206ENST00000602479 TATP17735 454 aaPredicted RBP30.06■■■□□ 2.4
UBE2E3-206ENST00000602479 POLR3GLQ9BT43 218 aa30.06■■■□□ 2.4
UBE2E3-206ENST00000602479 C5P01031 1676 aa30.06■■■□□ 2.4
UBE2E3-206ENST00000602479 SLC27A3Q5K4L6 730 aa30.05■■■□□ 2.4
UBE2E3-206ENST00000602479 PCDH11XQ9BZA7 1347 aa30.03■■■□□ 2.4
UBE2E3-206ENST00000602479 PCDH11YQ9BZA8 1340 aa30.03■■■□□ 2.4
UBE2E3-206ENST00000602479 MTFR1LQ9H019 292 aa30.03■■■□□ 2.4
UBE2E3-206ENST00000602479 ATF5Q9Y2D1 282 aaPredicted RBP30.03■■■□□ 2.4
UBE2E3-206ENST00000602479 WASHC2AQ641Q2 1341 aa30.02■■■□□ 2.4
UBE2E3-206ENST00000602479 PPM1GO15355 546 aaPredicted RBP30.01■■■□□ 2.39
UBE2E3-206ENST00000602479 AKT1S1Q96B36 256 aa30.01■■■□□ 2.39
UBE2E3-206ENST00000602479 SGIP1Q9BQI5 828 aa30■■■□□ 2.39
UBE2E3-206ENST00000602479 POLKQ9UBT6 870 aa29.99■■■□□ 2.39
UBE2E3-206ENST00000602479 UTRNP46939 3433 aa29.97■■■□□ 2.39
UBE2E3-206ENST00000602479 KCNQ4P56696 695 aa29.97■■■□□ 2.39
UBE2E3-206ENST00000602479 CYP27B1O15528 508 aa29.96■■■□□ 2.39
UBE2E3-206ENST00000602479 PANK3Q9H999 370 aa29.94■■■□□ 2.38
UBE2E3-206ENST00000602479 PNPLA7Q6ZV29 1317 aa29.94■■■□□ 2.38
UBE2E3-206ENST00000602479 EYA1Q99502 592 aa29.93■■■□□ 2.38
UBE2E3-206ENST00000602479 TNNT2P45379 298 aaPredicted RBP29.92■■■□□ 2.38
UBE2E3-206ENST00000602479 CCNL1Q9UK58 526 aaPredicted RBP29.92■■■□□ 2.38
UBE2E3-206ENST00000602479 FHDC1Q9C0D6 1143 aaPredicted RBP29.9■■■□□ 2.38
UBE2E3-206ENST00000602479 C4BP0C0L5 1744 aa29.88■■■□□ 2.37
UBE2E3-206ENST00000602479 EIF4A2Q14240 407 aaKnown RBP29.88■■■□□ 2.37
UBE2E3-206ENST00000602479 TFCP2L1Q9NZI6 479 aa29.88■■■□□ 2.37
UBE2E3-206ENST00000602479 PALLDQ8WX93 1383 aa29.88■■■□□ 2.37
UBE2E3-206ENST00000602479 UBR3Q6ZT12 1888 aa29.87■■■□□ 2.37
UBE2E3-206ENST00000602479 SLC16A10Q8TF71 515 aa29.87■■■□□ 2.37
UBE2E3-206ENST00000602479 CHD4Q14839 1912 aa29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 NKX1-1Q15270 411 aaPredicted RBP29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 ARXQ96QS3 562 aa29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 SYT17Q9BSW7 474 aa29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 SPG7Q9UQ90 795 aa29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 MAP3K5Q99683 1374 aa29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 PLEKHG2Q9H7P9 1386 aa29.86■■■□□ 2.37
UBE2E3-206ENST00000602479 MPRIPQ6WCQ1 1025 aa29.85■■■□□ 2.37
UBE2E3-206ENST00000602479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.85■■■□□ 2.37
UBE2E3-206ENST00000602479 GOLGB1Q14789 3259 aaKnown RBP29.85■■■□□ 2.37
UBE2E3-206ENST00000602479 DCAF8L1A6NGE4 600 aa29.84■■■□□ 2.37
UBE2E3-206ENST00000602479 IGSF1Q8N6C5 1336 aa29.83■■■□□ 2.37
UBE2E3-206ENST00000602479 YY1P25490 414 aa29.8■■■□□ 2.36
UBE2E3-206ENST00000602479 PIGBQ92521 554 aa29.79■■■□□ 2.36
UBE2E3-206ENST00000602479 PHKG2P15735 406 aa29.78■■■□□ 2.36
UBE2E3-206ENST00000602479 KIF7Q2M1P5 1343 aa29.77■■■□□ 2.36
UBE2E3-206ENST00000602479 MORC1Q86VD1 984 aa29.77■■■□□ 2.36
UBE2E3-206ENST00000602479 SMARCC1Q92922 1105 aaPredicted RBP29.77■■■□□ 2.36
UBE2E3-206ENST00000602479 ZNF831Q5JPB2 1677 aa29.76■■■□□ 2.36
UBE2E3-206ENST00000602479 VIRMAQ69YN4 1812 aaKnown RBP29.76■■■□□ 2.35
UBE2E3-206ENST00000602479 IFNL2Q8IZJ0 200 aa29.76■■■□□ 2.35
UBE2E3-206ENST00000602479 KNSTRNQ9Y448 316 aa29.76■■■□□ 2.35
UBE2E3-206ENST00000602479 POLD1P28340 1107 aa29.75■■■□□ 2.35
UBE2E3-206ENST00000602479 COL23A1Q86Y22 540 aaPredicted RBP29.75■■■□□ 2.35
UBE2E3-206ENST00000602479 COL5A3P25940 1745 aaPredicted RBP29.72■■■□□ 2.35
UBE2E3-206ENST00000602479 TMOD3Q9NYL9 352 aa29.72■■■□□ 2.35
UBE2E3-206ENST00000602479 HMGB2P26583 209 aaKnown RBP29.71■■■□□ 2.35
UBE2E3-206ENST00000602479 AMER1Q5JTC6 1135 aaPredicted RBP29.71■■■□□ 2.35
UBE2E3-206ENST00000602479 SCN11AQ9UI33 1791 aa29.71■■■□□ 2.35
UBE2E3-206ENST00000602479 MSH5O43196 834 aa29.7■■■□□ 2.35
UBE2E3-206ENST00000602479 LOC102724428A0A0B4J2F2 783 aa29.67■■■□□ 2.34
UBE2E3-206ENST00000602479 SIK1P57059 783 aa29.67■■■□□ 2.34
UBE2E3-206ENST00000602479 ASAP1Q9ULH1 1129 aa29.67■■■□□ 2.34
UBE2E3-206ENST00000602479 KDM6AO15550 1401 aaPredicted RBP29.67■■■□□ 2.34
UBE2E3-206ENST00000602479 KDRP35968 1356 aa29.66■■■□□ 2.34
UBE2E3-206ENST00000602479 AMIGO3Q86WK7 504 aa29.66■■■□□ 2.34
UBE2E3-206ENST00000602479 AEBP1Q8IUX7 1158 aa29.66■■■□□ 2.34
UBE2E3-206ENST00000602479 KLHL34Q8N239 644 aa29.66■■■□□ 2.34
UBE2E3-206ENST00000602479 FLAD1Q8NFF5 587 aa29.66■■■□□ 2.34
UBE2E3-206ENST00000602479 MSL1Q68DK7 614 aa29.65■■■□□ 2.34
UBE2E3-206ENST00000602479 AK7Q96M32 723 aa29.65■■■□□ 2.34
UBE2E3-206ENST00000602479 PLEKHO1Q53GL0 409 aaPredicted RBP29.63■■■□□ 2.33
UBE2E3-206ENST00000602479 LINC00116Q8NCU8 138 aa29.63■■■□□ 2.33
UBE2E3-206ENST00000602479 ATG3Q9NT62 314 aa29.63■■■□□ 2.33
UBE2E3-206ENST00000602479 ZNF530Q6P9A1 599 aaPredicted RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms