RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
LINC00343-209ENST00000601607 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
LINC00343-209ENST00000601607 MCM6Q14566 821 aa12.33□□□□□ -0.44
LINC00343-209ENST00000601607 TRMT44Q8IYL2 757 aaKnown RBP12.33□□□□□ -0.44
LINC00343-209ENST00000601607 ADAM32Q8TC27 787 aa12.33□□□□□ -0.44
LINC00343-209ENST00000601607 CDK15Q96Q40 435 aa12.33□□□□□ -0.44
LINC00343-209ENST00000601607 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
LINC00343-209ENST00000601607 MAP3K4Q9Y6R4 1608 aa12.32□□□□□ -0.44
LINC00343-209ENST00000601607 UHRF1BP1LA0JNW5 1464 aa12.32□□□□□ -0.44
LINC00343-209ENST00000601607 UACAQ9BZF9 1416 aa12.31□□□□□ -0.44
LINC00343-209ENST00000601607 GPR37L1O60883 481 aa12.31□□□□□ -0.44
LINC00343-209ENST00000601607 ADH1CP00326 375 aa12.31□□□□□ -0.44
LINC00343-209ENST00000601607 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
LINC00343-209ENST00000601607 TBC1D2BQ9UPU7 963 aa12.31□□□□□ -0.44
LINC00343-209ENST00000601607 CARMIL2Q6F5E8 1435 aa12.3□□□□□ -0.44
LINC00343-209ENST00000601607 VASH1Q7L8A9 365 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-209ENST00000601607 PRM3Q9NNZ6 103 aa12.3□□□□□ -0.44
LINC00343-209ENST00000601607 IGF1RP08069 1367 aa12.3□□□□□ -0.44
LINC00343-209ENST00000601607 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
LINC00343-209ENST00000601607 WIPF1O43516 503 aa12.29□□□□□ -0.44
LINC00343-209ENST00000601607 NNTQ13423 1086 aa12.29□□□□□ -0.44
LINC00343-209ENST00000601607 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
LINC00343-209ENST00000601607 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
LINC00343-209ENST00000601607 FBXO45P0C2W1 286 aa12.28□□□□□ -0.44
LINC00343-209ENST00000601607 GRM5P41594 1212 aa12.28□□□□□ -0.44
LINC00343-209ENST00000601607 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-209ENST00000601607 MAP4K5Q9Y4K4 846 aa12.28□□□□□ -0.44
LINC00343-209ENST00000601607 CUL7Q14999 1698 aa12.28□□□□□ -0.44
LINC00343-209ENST00000601607 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
LINC00343-209ENST00000601607 PTPRMP28827 1452 aa12.27□□□□□ -0.45
LINC00343-209ENST00000601607 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
LINC00343-209ENST00000601607 FSHRP23945 695 aa12.26□□□□□ -0.45
LINC00343-209ENST00000601607 GDPD2Q9HCC8 539 aa12.26□□□□□ -0.45
LINC00343-209ENST00000601607 NR5A1Q13285 461 aa12.25□□□□□ -0.45
LINC00343-209ENST00000601607 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
LINC00343-209ENST00000601607 KIF21BO75037 1637 aa12.24□□□□□ -0.45
LINC00343-209ENST00000601607 NR3C2P08235 984 aa12.24□□□□□ -0.45
LINC00343-209ENST00000601607 FLIIQ13045 1269 aa12.24□□□□□ -0.45
LINC00343-209ENST00000601607 NR1H3Q13133 447 aa12.24□□□□□ -0.45
LINC00343-209ENST00000601607 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
LINC00343-209ENST00000601607 CDV3Q9UKY7 258 aaKnown RBP12.24□□□□□ -0.45
LINC00343-209ENST00000601607 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
LINC00343-209ENST00000601607 ABL2P42684 1182 aa12.23□□□□□ -0.45
LINC00343-209ENST00000601607 KCTD15Q96SI1 283 aaPredicted RBP12.23□□□□□ -0.45
LINC00343-209ENST00000601607 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
LINC00343-209ENST00000601607 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
LINC00343-209ENST00000601607 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
LINC00343-209ENST00000601607 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
LINC00343-209ENST00000601607 WDR4P57081 412 aaKnown RBP12.21□□□□□ -0.45
LINC00343-209ENST00000601607 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
LINC00343-209ENST00000601607 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
LINC00343-209ENST00000601607 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
LINC00343-209ENST00000601607 IRF5Q13568 498 aa12.2□□□□□ -0.46
LINC00343-209ENST00000601607 NBPF20Q3BBV1 942 aa12.2□□□□□ -0.46
LINC00343-209ENST00000601607 NPAS3Q8IXF0 933 aa12.2□□□□□ -0.46
LINC00343-209ENST00000601607 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
LINC00343-209ENST00000601607 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
LINC00343-209ENST00000601607 BMP1P13497 986 aa12.19□□□□□ -0.46
LINC00343-209ENST00000601607 HSPA2P54652 639 aa12.19□□□□□ -0.46
LINC00343-209ENST00000601607 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
LINC00343-209ENST00000601607 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
LINC00343-209ENST00000601607 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
LINC00343-209ENST00000601607 TIMP2P16035 220 aa12.18□□□□□ -0.46
LINC00343-209ENST00000601607 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
LINC00343-209ENST00000601607 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
LINC00343-209ENST00000601607 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
LINC00343-209ENST00000601607 KLF16Q9BXK1 252 aaPredicted RBP12.18□□□□□ -0.46
LINC00343-209ENST00000601607 NXF1Q9UBU9 619 aaKnown RBP12.18□□□□□ -0.46
LINC00343-209ENST00000601607 ZNF330Q9Y3S2 320 aaPredicted RBP12.18□□□□□ -0.46
LINC00343-209ENST00000601607 ZIC2O95409 532 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-209ENST00000601607 RAB15P59190 212 aa12.17□□□□□ -0.46
LINC00343-209ENST00000601607 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
LINC00343-209ENST00000601607 ITPKCQ96DU7 683 aa12.17□□□□□ -0.46
LINC00343-209ENST00000601607 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
LINC00343-209ENST00000601607 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
LINC00343-209ENST00000601607 ZFAND3Q9H8U3 227 aa12.16□□□□□ -0.46
LINC00343-209ENST00000601607 RAD21O60216 631 aa12.15□□□□□ -0.46
LINC00343-209ENST00000601607 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-209ENST00000601607 VAC14Q08AM6 782 aa12.14□□□□□ -0.47
LINC00343-209ENST00000601607 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
LINC00343-209ENST00000601607 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
LINC00343-209ENST00000601607 ARID4BQ4LE39 1312 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-209ENST00000601607 ARAP3Q8WWN8 1544 aa12.12□□□□□ -0.47
LINC00343-209ENST00000601607 ESPNB1AK53 854 aa12.12□□□□□ -0.47
LINC00343-209ENST00000601607 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-209ENST00000601607 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-209ENST00000601607 DHX9Q08211 1270 aaKnown RBP12.12□□□□□ -0.47
LINC00343-209ENST00000601607 SCARF1Q14162 830 aa12.12□□□□□ -0.47
LINC00343-209ENST00000601607 LCE2CQ5TA81 110 aa12.12□□□□□ -0.47
LINC00343-209ENST00000601607 IRF7Q92985 503 aa12.12□□□□□ -0.47
LINC00343-209ENST00000601607 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
LINC00343-209ENST00000601607 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
LINC00343-209ENST00000601607 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
LINC00343-209ENST00000601607 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
LINC00343-209ENST00000601607 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
LINC00343-209ENST00000601607 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00343-209ENST00000601607 MRPL14Q6P1L8 145 aaKnown RBP12.1□□□□□ -0.47
LINC00343-209ENST00000601607 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
LINC00343-209ENST00000601607 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
LINC00343-209ENST00000601607 KIAA0556O60303 1618 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms