RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 LARP1Q6PKG0 1096 aaKnown RBP29.46■■■□□ 2.31
IRF3-228ENST00000601291 RTF1Q92541 710 aaKnown RBP29.46■■■□□ 2.31
IRF3-228ENST00000601291 MYH16Q9H6N6 1097 aa29.46■■■□□ 2.31
IRF3-228ENST00000601291 SPINK5Q9NQ38 1064 aaPredicted RBP29.46■■■□□ 2.31
IRF3-228ENST00000601291 TRMT2AQ8IZ69 625 aaKnown RBP29.45■■■□□ 2.31
IRF3-228ENST00000601291 HTATSF1O43719 755 aaKnown RBP29.44■■■□□ 2.3
IRF3-228ENST00000601291 MAP3K5Q99683 1374 aa29.44■■■□□ 2.3
IRF3-228ENST00000601291 MEGF6O75095 1541 aa29.43■■■□□ 2.3
IRF3-228ENST00000601291 GNAT3A8MTJ3 354 aa29.43■■■□□ 2.3
IRF3-228ENST00000601291 NWD2Q9ULI1 1742 aa29.42■■■□□ 2.3
IRF3-228ENST00000601291 ZNF530Q6P9A1 599 aaPredicted RBP29.41■■■□□ 2.3
IRF3-228ENST00000601291 NRAPQ86VF7 1730 aa29.41■■■□□ 2.3
IRF3-228ENST00000601291 PARP4Q9UKK3 1724 aaKnown RBP29.41■■■□□ 2.3
IRF3-228ENST00000601291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.4■■■□□ 2.3
IRF3-228ENST00000601291 SPG7Q9UQ90 795 aa29.4■■■□□ 2.3
IRF3-228ENST00000601291 SLIT2O94813 1529 aa29.4■■■□□ 2.3
IRF3-228ENST00000601291 THUMPD2Q9BTF0 503 aaKnown RBP29.39■■■□□ 2.3
IRF3-228ENST00000601291 DCTN1Q14203 1278 aa29.39■■■□□ 2.29
IRF3-228ENST00000601291 AKAP4Q5JQC9 854 aa29.39■■■□□ 2.29
IRF3-228ENST00000601291 C1orf141Q5JVX7 400 aa29.39■■■□□ 2.29
IRF3-228ENST00000601291 LRP6O75581 1613 aa29.38■■■□□ 2.29
IRF3-228ENST00000601291 OVOS2A0A0G2JMS6 1433 aa29.38■■■□□ 2.29
IRF3-228ENST00000601291 MCM10Q7L590 875 aa29.38■■■□□ 2.29
IRF3-228ENST00000601291 GNAI1P63096 354 aa29.37■■■□□ 2.29
IRF3-228ENST00000601291 IFT57Q9NWB7 429 aa29.37■■■□□ 2.29
IRF3-228ENST00000601291 IL2RBP14784 551 aa29.36■■■□□ 2.29
IRF3-228ENST00000601291 C8orf37Q96NL8 207 aa29.36■■■□□ 2.29
IRF3-228ENST00000601291 PKD1L3Q7Z443 1732 aa29.36■■■□□ 2.29
IRF3-228ENST00000601291 FANCIQ9NVI1 1328 aa29.35■■■□□ 2.29
IRF3-228ENST00000601291 NGLY1Q96IV0 654 aa29.35■■■□□ 2.29
IRF3-228ENST00000601291 USP35Q9P2H5 1018 aa29.35■■■□□ 2.29
IRF3-228ENST00000601291 LAS1LQ9Y4W2 734 aaKnown RBP29.34■■■□□ 2.29
IRF3-228ENST00000601291 LRRC37A3O60309 1634 aa29.33■■■□□ 2.29
IRF3-228ENST00000601291 MEX3CQ5U5Q3 659 aaKnown RBP29.33■■■□□ 2.29
IRF3-228ENST00000601291 CFAP44Q96MT7 982 aa29.33■■■□□ 2.29
IRF3-228ENST00000601291 RCAN3Q9UKA8 241 aa29.32■■■□□ 2.28
IRF3-228ENST00000601291 TSR2Q969E8 191 aaKnown RBP29.31■■■□□ 2.28
IRF3-228ENST00000601291 ZNF853P0CG23 659 aa29.3■■■□□ 2.28
IRF3-228ENST00000601291 UNC5CLQ8IV45 518 aa29.3■■■□□ 2.28
IRF3-228ENST00000601291 SUPT16HQ9Y5B9 1047 aaKnown RBP29.3■■■□□ 2.28
IRF3-228ENST00000601291 IFNL2Q8IZJ0 200 aa29.29■■■□□ 2.28
IRF3-228ENST00000601291 ZCRB1Q8TBF4 217 aaKnown RBP29.29■■■□□ 2.28
IRF3-228ENST00000601291 CEMIPQ8WUJ3 1361 aa29.28■■■□□ 2.28
IRF3-228ENST00000601291 PCDH11XQ9BZA7 1347 aa29.28■■■□□ 2.28
IRF3-228ENST00000601291 PCDH11YQ9BZA8 1340 aa29.28■■■□□ 2.28
IRF3-228ENST00000601291 FNBP4Q8N3X1 1017 aaPredicted RBP29.28■■■□□ 2.28
IRF3-228ENST00000601291 IL17REQ8NFR9 667 aa29.28■■■□□ 2.28
IRF3-228ENST00000601291 THRAP3Q9Y2W1 955 aaKnown RBP29.28■■■□□ 2.28
IRF3-228ENST00000601291 SPATA31A1Q5TZJ5 1347 aa29.27■■■□□ 2.28
IRF3-228ENST00000601291 PHKG2P15735 406 aa29.27■■■□□ 2.28
IRF3-228ENST00000601291 MBIPQ9NS73 344 aa29.26■■■□□ 2.28
IRF3-228ENST00000601291 DISP2A7MBM2 1401 aa29.26■■■□□ 2.27
IRF3-228ENST00000601291 BCL9LQ86UU0 1499 aa29.26■■■□□ 2.27
IRF3-228ENST00000601291 WNK3Q9BYP7 1800 aa29.25■■■□□ 2.27
IRF3-228ENST00000601291 SPATA31A5Q5VU36 1347 aa29.25■■■□□ 2.27
IRF3-228ENST00000601291 SPATA31A7Q8IWB4 1347 aa29.25■■■□□ 2.27
IRF3-228ENST00000601291 HSP90AB1P08238 724 aaKnown RBP29.25■■■□□ 2.27
IRF3-228ENST00000601291 MPRIPQ6WCQ1 1025 aa29.25■■■□□ 2.27
IRF3-228ENST00000601291 CDCA7Q9BWT1 371 aaPredicted RBP29.25■■■□□ 2.27
IRF3-228ENST00000601291 CCDC9Q9Y3X0 531 aaKnown RBP29.25■■■□□ 2.27
IRF3-228ENST00000601291 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.24■■■□□ 2.27
IRF3-228ENST00000601291 CHL1O00533 1208 aa29.24■■■□□ 2.27
IRF3-228ENST00000601291 RNMTO43148 476 aaKnown RBP29.24■■■□□ 2.27
IRF3-228ENST00000601291 CT47B1P0C2W7 299 aaPredicted RBP29.24■■■□□ 2.27
IRF3-228ENST00000601291 EXOSC9Q06265 439 aaKnown RBP29.23■■■□□ 2.27
IRF3-228ENST00000601291 ADAMTS7Q9UKP4 1686 aa29.23■■■□□ 2.27
IRF3-228ENST00000601291 CYP27B1O15528 508 aa29.22■■■□□ 2.27
IRF3-228ENST00000601291 TEFQ10587 303 aa29.22■■■□□ 2.27
IRF3-228ENST00000601291 LGR6Q9HBX8 967 aa29.22■■■□□ 2.27
IRF3-228ENST00000601291 BABAM1Q9NWV8 329 aa29.22■■■□□ 2.27
IRF3-228ENST00000601291 USP21Q9UK80 565 aa29.22■■■□□ 2.27
IRF3-228ENST00000601291 VPS72Q15906 364 aa29.22■■■□□ 2.27
IRF3-228ENST00000601291 NEFLP07196 543 aa29.21■■■□□ 2.27
IRF3-228ENST00000601291 TAF7Q15545 349 aaPredicted RBP29.21■■■□□ 2.27
IRF3-228ENST00000601291 TSPYL4Q9UJ04 414 aa29.21■■■□□ 2.27
IRF3-228ENST00000601291 DCAF5Q96JK2 942 aa29.2■■■□□ 2.26
IRF3-228ENST00000601291 SHANK3Q9BYB0 1731 aa29.19■■■□□ 2.26
IRF3-228ENST00000601291 KDM6AO15550 1401 aaPredicted RBP29.18■■■□□ 2.26
IRF3-228ENST00000601291 BARGINQ6ZT62 677 aa29.18■■■□□ 2.26
IRF3-228ENST00000601291 VIRMAQ69YN4 1812 aaKnown RBP29.17■■■□□ 2.26
IRF3-228ENST00000601291 SCN11AQ9UI33 1791 aa29.17■■■□□ 2.26
IRF3-228ENST00000601291 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
IRF3-228ENST00000601291 AFF2P51816 1311 aa29.16■■■□□ 2.26
IRF3-228ENST00000601291 RNF123Q5XPI4 1314 aa29.16■■■□□ 2.26
IRF3-228ENST00000601291 DDX54Q8TDD1 881 aaKnown RBP29.16■■■□□ 2.26
IRF3-228ENST00000601291 TNS2Q63HR2 1409 aa29.15■■■□□ 2.26
IRF3-228ENST00000601291 EXOC5O00471 708 aa29.14■■■□□ 2.26
IRF3-228ENST00000601291 MIS18AQ9NYP9 233 aa29.14■■■□□ 2.26
IRF3-228ENST00000601291 RRP1P56182 461 aaKnown RBP29.13■■■□□ 2.25
IRF3-228ENST00000601291 NKX1-1Q15270 411 aaPredicted RBP29.13■■■□□ 2.25
IRF3-228ENST00000601291 ZNF428Q96B54 188 aa29.13■■■□□ 2.25
IRF3-228ENST00000601291 GTF3C3Q9Y5Q9 886 aa29.13■■■□□ 2.25
IRF3-228ENST00000601291 MRC1P22897 1456 aa29.12■■■□□ 2.25
IRF3-228ENST00000601291 SLC52A2Q9HAB3 445 aa29.12■■■□□ 2.25
IRF3-228ENST00000601291 BTBD11A6QL63 1104 aa29.11■■■□□ 2.25
IRF3-228ENST00000601291 RARSP54136 660 aaKnown RBP29.11■■■□□ 2.25
IRF3-228ENST00000601291 SIPA1L3O60292 1781 aaPredicted RBP29.1■■■□□ 2.25
IRF3-228ENST00000601291 DDB1Q16531 1140 aa29.1■■■□□ 2.25
IRF3-228ENST00000601291 TWISTNBQ3B726 338 aaPredicted RBP29.1■■■□□ 2.25
IRF3-228ENST00000601291 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms