RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-211ENST00000601222 NCAPD2Q15021 1401 aa12.5□□□□□ -0.41
SIPA1L3-211ENST00000601222 NHSQ6T4R5 1651 aa12.5□□□□□ -0.41
SIPA1L3-211ENST00000601222 PLSCR1O15162 318 aa12.49□□□□□ -0.41
SIPA1L3-211ENST00000601222 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
SIPA1L3-211ENST00000601222 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
SIPA1L3-211ENST00000601222 NPC1L1Q9UHC9 1359 aa12.48□□□□□ -0.41
SIPA1L3-211ENST00000601222 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
SIPA1L3-211ENST00000601222 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
SIPA1L3-211ENST00000601222 EYA1Q99502 592 aa12.48□□□□□ -0.41
SIPA1L3-211ENST00000601222 KCNQ2O43526 872 aa12.47□□□□□ -0.41
SIPA1L3-211ENST00000601222 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
SIPA1L3-211ENST00000601222 BTAF1O14981 1849 aa12.46□□□□□ -0.41
SIPA1L3-211ENST00000601222 PKD1L3Q7Z443 1732 aa12.46□□□□□ -0.41
SIPA1L3-211ENST00000601222 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
SIPA1L3-211ENST00000601222 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
SIPA1L3-211ENST00000601222 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
SIPA1L3-211ENST00000601222 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
SIPA1L3-211ENST00000601222 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
SIPA1L3-211ENST00000601222 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
SIPA1L3-211ENST00000601222 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
SIPA1L3-211ENST00000601222 NBPF14Q5TI25 921 aa12.43□□□□□ -0.42
SIPA1L3-211ENST00000601222 PROM2Q8N271 834 aa12.43□□□□□ -0.42
SIPA1L3-211ENST00000601222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.42
SIPA1L3-211ENST00000601222 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
SIPA1L3-211ENST00000601222 CYP27B1O15528 508 aa12.42□□□□□ -0.42
SIPA1L3-211ENST00000601222 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
SIPA1L3-211ENST00000601222 MTHFSP49914 203 aa12.42□□□□□ -0.42
SIPA1L3-211ENST00000601222 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
SIPA1L3-211ENST00000601222 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
SIPA1L3-211ENST00000601222 IL13P35225 146 aa12.41□□□□□ -0.42
SIPA1L3-211ENST00000601222 TXNRD1Q16881 649 aa12.41□□□□□ -0.42
SIPA1L3-211ENST00000601222 ITGB4P16144 1822 aa12.4□□□□□ -0.42
SIPA1L3-211ENST00000601222 SYTL4Q96C24 671 aaPredicted RBP12.4□□□□□ -0.42
SIPA1L3-211ENST00000601222 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
SIPA1L3-211ENST00000601222 LRP5O75197 1615 aa12.38□□□□□ -0.43
SIPA1L3-211ENST00000601222 LY75O60449 1722 aa12.38□□□□□ -0.43
SIPA1L3-211ENST00000601222 TOGARAM1Q9Y4F4 1720 aa12.38□□□□□ -0.43
SIPA1L3-211ENST00000601222 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
SIPA1L3-211ENST00000601222 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
SIPA1L3-211ENST00000601222 KDRP35968 1356 aa12.38□□□□□ -0.43
SIPA1L3-211ENST00000601222 PHKG2P15735 406 aa12.37□□□□□ -0.43
SIPA1L3-211ENST00000601222 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
SIPA1L3-211ENST00000601222 SULT6B1Q6IMI4 303 aa12.37□□□□□ -0.43
SIPA1L3-211ENST00000601222 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
SIPA1L3-211ENST00000601222 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
SIPA1L3-211ENST00000601222 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
SIPA1L3-211ENST00000601222 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
SIPA1L3-211ENST00000601222 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
SIPA1L3-211ENST00000601222 PAPPAQ13219 1627 aa12.36□□□□□ -0.43
SIPA1L3-211ENST00000601222 COL3A1P02461 1466 aaPredicted RBP12.35□□□□□ -0.43
SIPA1L3-211ENST00000601222 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
SIPA1L3-211ENST00000601222 STK32BQ9NY57 414 aa12.35□□□□□ -0.43
SIPA1L3-211ENST00000601222 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
SIPA1L3-211ENST00000601222 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
SIPA1L3-211ENST00000601222 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
SIPA1L3-211ENST00000601222 CASZ1Q86V15 1759 aa12.33□□□□□ -0.44
SIPA1L3-211ENST00000601222 HSP90AB1P08238 724 aaKnown RBP12.33□□□□□ -0.44
SIPA1L3-211ENST00000601222 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
SIPA1L3-211ENST00000601222 PIGBQ92521 554 aa12.33□□□□□ -0.44
SIPA1L3-211ENST00000601222 HMOX1P09601 288 aa12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 CFAP53Q96M91 514 aa12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
SIPA1L3-211ENST00000601222 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
SIPA1L3-211ENST00000601222 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
SIPA1L3-211ENST00000601222 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
SIPA1L3-211ENST00000601222 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
SIPA1L3-211ENST00000601222 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
SIPA1L3-211ENST00000601222 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
SIPA1L3-211ENST00000601222 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 C5P01031 1676 aa12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 HMGB2P26583 209 aaKnown RBP12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 KCNQ4P56696 695 aa12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 PDGFDQ9GZP0 370 aaPredicted RBP12.3□□□□□ -0.44
SIPA1L3-211ENST00000601222 U2SURPO15042 1029 aaKnown RBP12.29□□□□□ -0.44
SIPA1L3-211ENST00000601222 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
SIPA1L3-211ENST00000601222 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
SIPA1L3-211ENST00000601222 SPON1Q9HCB6 807 aa12.29□□□□□ -0.44
SIPA1L3-211ENST00000601222 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
SIPA1L3-211ENST00000601222 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
SIPA1L3-211ENST00000601222 LOC102724428A0A0B4J2F2 783 aa12.27□□□□□ -0.45
SIPA1L3-211ENST00000601222 SIK1P57059 783 aa12.27□□□□□ -0.45
SIPA1L3-211ENST00000601222 CABP4P57796 275 aa12.27□□□□□ -0.45
SIPA1L3-211ENST00000601222 MTHFSDQ2M296 383 aaKnown RBP12.27□□□□□ -0.45
SIPA1L3-211ENST00000601222 ATG3Q9NT62 314 aa12.27□□□□□ -0.45
SIPA1L3-211ENST00000601222 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.45
SIPA1L3-211ENST00000601222 ZBTB7AO95365 584 aa12.26□□□□□ -0.45
SIPA1L3-211ENST00000601222 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
SIPA1L3-211ENST00000601222 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
SIPA1L3-211ENST00000601222 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
SIPA1L3-211ENST00000601222 RALBP1Q15311 655 aa12.25□□□□□ -0.45
SIPA1L3-211ENST00000601222 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
SIPA1L3-211ENST00000601222 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms