RNA–Protein interactions for RNA: ENST00000601138.5

ZNF546-208, Transcript of zinc finger protein 546, humanhuman

TSL 5

Gene ZNF546, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-208ENST00000601138 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
ZNF546-208ENST00000601138 ABHD8Q96I13 439 aa12.23□□□□□ -0.45
ZNF546-208ENST00000601138 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
ZNF546-208ENST00000601138 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
ZNF546-208ENST00000601138 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
ZNF546-208ENST00000601138 FOXN1O15353 648 aa12.21□□□□□ -0.45
ZNF546-208ENST00000601138 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
ZNF546-208ENST00000601138 CARD10Q9BWT7 1032 aa12.21□□□□□ -0.45
ZNF546-208ENST00000601138 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
ZNF546-208ENST00000601138 KDM2BQ8NHM5 1336 aa12.2□□□□□ -0.46
ZNF546-208ENST00000601138 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
ZNF546-208ENST00000601138 NLRP6P59044 892 aa12.19□□□□□ -0.46
ZNF546-208ENST00000601138 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
ZNF546-208ENST00000601138 CTCFP49711 727 aaPredicted RBP12.18□□□□□ -0.46
ZNF546-208ENST00000601138 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
ZNF546-208ENST00000601138 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
ZNF546-208ENST00000601138 KCNQ4P56696 695 aa12.17□□□□□ -0.46
ZNF546-208ENST00000601138 L3MBTL2Q969R5 705 aa12.17□□□□□ -0.46
ZNF546-208ENST00000601138 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
ZNF546-208ENST00000601138 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
ZNF546-208ENST00000601138 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 RRAGCQ9HB90 399 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 SLIT3O75094 1523 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 QRICH2Q9H0J4 1663 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 KIF13BQ9NQT8 1826 aa12.16□□□□□ -0.46
ZNF546-208ENST00000601138 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
ZNF546-208ENST00000601138 AIDAQ96BJ3 306 aa12.15□□□□□ -0.46
ZNF546-208ENST00000601138 C5P01031 1676 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 CCDC85CA6NKD9 419 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 ARHGAP27Q6ZUM4 889 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
ZNF546-208ENST00000601138 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
ZNF546-208ENST00000601138 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
ZNF546-208ENST00000601138 C9orf131Q5VYM1 1079 aa12.13□□□□□ -0.47
ZNF546-208ENST00000601138 FLAD1Q8NFF5 587 aa12.13□□□□□ -0.47
ZNF546-208ENST00000601138 SBF1O95248 1867 aa12.12□□□□□ -0.47
ZNF546-208ENST00000601138 CPSF1Q10570 1443 aaKnown RBP12.12□□□□□ -0.47
ZNF546-208ENST00000601138 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
ZNF546-208ENST00000601138 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
ZNF546-208ENST00000601138 LBX1P52954 281 aa12.11□□□□□ -0.47
ZNF546-208ENST00000601138 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
ZNF546-208ENST00000601138 BCS1LQ9Y276 419 aa12.11□□□□□ -0.47
ZNF546-208ENST00000601138 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
ZNF546-208ENST00000601138 EVC2Q86UK5 1308 aa12.11□□□□□ -0.47
ZNF546-208ENST00000601138 SOX12O15370 315 aa12.1□□□□□ -0.47
ZNF546-208ENST00000601138 ARHGEF25Q86VW2 580 aa12.1□□□□□ -0.47
ZNF546-208ENST00000601138 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
ZNF546-208ENST00000601138 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
ZNF546-208ENST00000601138 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
ZNF546-208ENST00000601138 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
ZNF546-208ENST00000601138 HMGB2P26583 209 aaKnown RBP12.08□□□□□ -0.48
ZNF546-208ENST00000601138 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
ZNF546-208ENST00000601138 TTC21BQ7Z4L5 1316 aa12.08□□□□□ -0.48
ZNF546-208ENST00000601138 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
ZNF546-208ENST00000601138 IL2RBP14784 551 aa12.07□□□□□ -0.48
ZNF546-208ENST00000601138 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
ZNF546-208ENST00000601138 TGFB2P61812 414 aa12.06□□□□□ -0.48
ZNF546-208ENST00000601138 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
ZNF546-208ENST00000601138 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
ZNF546-208ENST00000601138 CNTNAP1P78357 1384 aa12.05□□□□□ -0.48
ZNF546-208ENST00000601138 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
ZNF546-208ENST00000601138 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
ZNF546-208ENST00000601138 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
ZNF546-208ENST00000601138 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
ZNF546-208ENST00000601138 NSD2O96028 1365 aa12.05□□□□□ -0.48
ZNF546-208ENST00000601138 FCHSD2O94868 740 aa12.04□□□□□ -0.48
ZNF546-208ENST00000601138 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
ZNF546-208ENST00000601138 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
ZNF546-208ENST00000601138 KTN1Q86UP2 1357 aaKnown RBP12.04□□□□□ -0.48
ZNF546-208ENST00000601138 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
ZNF546-208ENST00000601138 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
ZNF546-208ENST00000601138 USP47Q96K76 1375 aa12.03□□□□□ -0.48
ZNF546-208ENST00000601138 A0A0G2JLW4 131 aa12.02□□□□□ -0.49
ZNF546-208ENST00000601138 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
ZNF546-208ENST00000601138 NFAT5O94916 1531 aa12.01□□□□□ -0.49
ZNF546-208ENST00000601138 PRPF38BQ5VTL8 546 aaKnown RBP12.01□□□□□ -0.49
ZNF546-208ENST00000601138 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
ZNF546-208ENST00000601138 ERBB3P21860 1342 aa12.01□□□□□ -0.49
ZNF546-208ENST00000601138 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
ZNF546-208ENST00000601138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12□□□□□ -0.49
ZNF546-208ENST00000601138 ROCK2O75116 1388 aaKnown RBP12□□□□□ -0.49
ZNF546-208ENST00000601138 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
ZNF546-208ENST00000601138 VEGFBP49765 207 aa11.99□□□□□ -0.49
ZNF546-208ENST00000601138 CUL9Q8IWT3 2517 aa11.98□□□□□ -0.49
ZNF546-208ENST00000601138 USP31Q70CQ4 1352 aa11.98□□□□□ -0.49
ZNF546-208ENST00000601138 GLTPD2A6NH11 291 aa11.98□□□□□ -0.49
ZNF546-208ENST00000601138 DPEP1P16444 411 aa11.98□□□□□ -0.49
ZNF546-208ENST00000601138 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
ZNF546-208ENST00000601138 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
ZNF546-208ENST00000601138 AK7Q96M32 723 aa11.98□□□□□ -0.49
ZNF546-208ENST00000601138 TIAM2Q8IVF5 1701 aa11.97□□□□□ -0.49
ZNF546-208ENST00000601138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
ZNF546-208ENST00000601138 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
ZNF546-208ENST00000601138 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
ZNF546-208ENST00000601138 AMIGO3Q86WK7 504 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms