RNA–Protein interactions for RNA: ENST00000600681.5

FKRP-221, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-221ENST00000600681 SLAIN2Q9P270 581 aa4.54□□□□□ -1.68
FKRP-221ENST00000600681 NOVA2Q9UNW9 492 aaKnown RBP4.54□□□□□ -1.68
FKRP-221ENST00000600681 ATP9BO43861 1147 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 ERCC5P28715 1186 aaPredicted RBP4.53□□□□□ -1.68
FKRP-221ENST00000600681 WNT7BP56706 349 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 SH3BP2P78314 561 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 SEMA3FQ13275 785 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 TSNAXIP1Q2TAA8 658 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 FBXO33Q7Z6M2 555 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 EVA1BQ9NVM1 165 aa4.53□□□□□ -1.68
FKRP-221ENST00000600681 C11orf95C9JLR9 678 aaPredicted RBP4.52□□□□□ -1.69
FKRP-221ENST00000600681 SNRPBP14678 240 aaKnown RBP4.52□□□□□ -1.69
FKRP-221ENST00000600681 GJA5P36382 358 aa4.52□□□□□ -1.69
FKRP-221ENST00000600681 CTDSPL2Q05D32 466 aa4.52□□□□□ -1.69
FKRP-221ENST00000600681 TREML4Q6UXN2 200 aa4.52□□□□□ -1.69
FKRP-221ENST00000600681 BAP1Q92560 729 aa4.52□□□□□ -1.69
FKRP-221ENST00000600681 ATP13A2Q9NQ11 1180 aa4.52□□□□□ -1.69
FKRP-221ENST00000600681 ALDH1A1P00352 501 aa4.51□□□□□ -1.69
FKRP-221ENST00000600681 CCNYL3P0C7X3 344 aa4.51□□□□□ -1.69
FKRP-221ENST00000600681 MTMR2Q13614 643 aa4.51□□□□□ -1.69
FKRP-221ENST00000600681 TMED8Q6PL24 325 aaPredicted RBP4.51□□□□□ -1.69
FKRP-221ENST00000600681 NOP9Q86U38 636 aaKnown RBP4.51□□□□□ -1.69
FKRP-221ENST00000600681 CFAP99D6REC4 459 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 FAM69CQ0P6D2 419 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 KCNH2Q12809 1159 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 PTPRNQ16849 979 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 PRPF38BQ5VTL8 546 aaKnown RBP4.5□□□□□ -1.69
FKRP-221ENST00000600681 DESI1Q6ICB0 168 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 MICAL1Q8TDZ2 1067 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 ZNF526Q8TF50 670 aaPredicted RBP4.5□□□□□ -1.69
FKRP-221ENST00000600681 DNAJC2Q99543 621 aaKnown RBP4.5□□□□□ -1.69
FKRP-221ENST00000600681 BACH2Q9BYV9 841 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 LNPKQ9C0E8 428 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 UNC93B1Q9H1C4 597 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.5□□□□□ -1.69
FKRP-221ENST00000600681 SBNO2Q9Y2G9 1366 aa4.5□□□□□ -1.69
FKRP-221ENST00000600681 LOC102724159A0A0B4J2E5 919 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 RAB11FIP3O75154 756 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 SCNN1AP37088 669 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 PWP2Q15269 919 aaKnown RBP4.49□□□□□ -1.69
FKRP-221ENST00000600681 LINC01559Q495D7 138 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 C9orf131Q5VYM1 1079 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 LYPD8Q6UX82 237 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 TICAM2Q86XR7 235 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 EHBP1Q8NDI1 1231 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 EPS8L1Q8TE68 723 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 LRRN4Q8WUT4 740 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 PIK3R5Q8WYR1 880 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 CLP1Q92989 425 aaKnown RBP4.49□□□□□ -1.69
FKRP-221ENST00000600681 TANGO6Q9C0B7 1094 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 ZBTB3Q9H5J0 574 aa4.49□□□□□ -1.69
FKRP-221ENST00000600681 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.49□□□□□ -1.69
FKRP-221ENST00000600681 TMA7Q9Y2S6 64 aaKnown RBP4.49□□□□□ -1.69
FKRP-221ENST00000600681 TLDC2A0PJX2 215 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 PLEKHD1A6NEE1 506 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 CLSTN1O94985 981 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 HDLBPQ00341 1268 aaKnown RBP4.48□□□□□ -1.69
FKRP-221ENST00000600681 NFX1Q12986 1120 aaKnown RBP4.48□□□□□ -1.69
FKRP-221ENST00000600681 TAF7LQ5H9L4 462 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 ZNF511Q8NB15 262 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 TRIM47Q96LD4 638 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 CDCA7Q9BWT1 371 aaPredicted RBP4.48□□□□□ -1.69
FKRP-221ENST00000600681 RIPOR2Q9Y4F9 1068 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 PPME1Q9Y570 386 aa4.48□□□□□ -1.69
FKRP-221ENST00000600681 PIK3CDO00329 1044 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 PER1O15534 1290 aaPredicted RBP4.47□□□□□ -1.69
FKRP-221ENST00000600681 ATP2B4P23634 1241 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 EIF4G2P78344 907 aaKnown RBP eCLIP4.47□□□□□ -1.69
FKRP-221ENST00000600681 RAD51AP2Q09MP3 1159 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 CRTC2Q53ET0 693 aaPredicted RBP4.47□□□□□ -1.69
FKRP-221ENST00000600681 FAM200AQ8TCP9 573 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 DHX38Q92620 1227 aaKnown RBP4.47□□□□□ -1.69
FKRP-221ENST00000600681 GPATCH3Q96I76 525 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 PRDM16Q9HAZ2 1276 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 CUEDC1Q9NWM3 386 aaPredicted RBP4.47□□□□□ -1.69
FKRP-221ENST00000600681 SUGT1Q9Y2Z0 365 aa4.47□□□□□ -1.69
FKRP-221ENST00000600681 USP17L3A6NCW0 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L4A6NCW7 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 FAM196BA6NMK8 535 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L15C9J2P7 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L10C9JJH3 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L13C9JLJ4 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L12C9JPN9 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L11C9JVI0 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L21D6R901 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L18D6R9N7 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L22D6RA61 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L17D6RBQ6 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L19D6RCP7 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L20D6RJB6 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 SCAMP3O14828 347 aaKnown RBP4.46□□□□□ -1.7
FKRP-221ENST00000600681 LZTS3O60299 673 aaPredicted RBP4.46□□□□□ -1.7
FKRP-221ENST00000600681 WFS1O76024 890 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 F12P00748 615 aaPredicted RBP4.46□□□□□ -1.7
FKRP-221ENST00000600681 BMP1P13497 986 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L24Q0WX57 530 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 CCDC144BQ3MJ40 725 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 EGFLAMQ63HQ2 1017 aa4.46□□□□□ -1.7
FKRP-221ENST00000600681 USP17L2Q6R6M4 530 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms